About the Execution of LoLA for GPPP-PT-C0010N0000000100
Execution Summary | |||||
Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
15919.290 | 2969397.00 | 2977469.00 | 19716.80 | ?TFTTFTTFTTFFTT? | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Waiting for the VM to be ready (probing ssh)
..........................
/home/mcc/execution
total 188K
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 22K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.9K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.7K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.9K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 21K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 115 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 353 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 17 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 21K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool lola
Input is GPPP-PT-C0010N0000000100, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r088-blw7-152649998300291
=====================================================================
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-00
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-01
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-02
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-03
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-04
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-05
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-06
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-07
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-08
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-09
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-10
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-11
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-12
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-13
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-14
FORMULA_NAME GPPP-PT-C0010N0000000100-CTLFireability-15
=== Now, execution of the tool begins
BK_START 1526721047596
info: Time: 3600 - MCC
===========================================================================================
prep: translating GPPP-PT-C0010N0000000100 Petri net model.pnml into LoLA format
===========================================================================================
prep: translating PT Petri net complete
prep: check for too many tokens
===========================================================================================
prep: translating GPPP-PT-C0010N0000000100 formula CTLFireability into LoLA format
===========================================================================================
prep: translating PT formula complete
vrfy: Checking CTLFireability @ GPPP-PT-C0010N0000000100 @ 3570 seconds
lola: LoLA will run for 3570 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 55/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: Size of bit vector: 1056
lola: finding significant places
lola: 33 places, 22 transitions, 21 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 30 transition conflict sets
lola: TASK
lola: reading formula from GPPP-PT-C0010N0000000100-CTLFireability.task
lola: A (G (E (F (A (X (FIREABLE(G6P_dehydrogenase))))))) : E (F (E ((FIREABLE(Lactate_dehydrogenase) U (FIREABLE(Enolase) AND FIREABLE(Pyruvate_kinase)))))) : E ((NOT(E (X (FIREABLE(Ru5P_epimerase)))) U (FIREABLE(Lactate_dehydrogenase) AND ((FIREABLE(G6P_dehydrogenase) AND FIREABLE(remove)) OR NOT FIREABLE(Aldolase))))) : (((FIREABLE(Glutathione_oxidation) OR E (F ((FIREABLE(Enolase) AND FIREABLE(Ru5P_isomerase))))) AND NOT(A (G (NOT FIREABLE(Hexokinase))))) OR E (X (A ((FIREABLE(Enolase) U FIREABLE(Ru5P_epimerase)))))) : E (F (FIREABLE(Enolase))) : E (F (E (G (FIREABLE(remove))))) : (NOT(A (G (((FIREABLE(Aldolase) AND FIREABLE(TIM_backward)) OR NOT FIREABLE(Pyruvate_kinase))))) AND NOT FIREABLE(GAP_dehydrogenase)) : (E (F (((NOT FIREABLE(Hexokinase) AND (FIREABLE(Phosphofructokinase) OR FIREABLE(Glutathione_reductose))) OR (FIREABLE(GAP_dehydrogenase) AND FIREABLE(Ru5P_isomerase) AND FIREABLE(Hexokinase) AND FIREABLE(remove))))) AND E (X (((NOT FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Phosphoglycerate_kinase)) OR FIREABLE(Phosphoglycerate_kinase))))) : (E (X (A (G (NOT FIREABLE(Enolase))))) OR FIREABLE(Transketolase1)) : NOT((E (G (E (F (FIREABLE(remove))))) OR FIREABLE(Phosphoglycerate_mutase))) : A (X (A (F (A (F (FIREABLE(TIM_backward))))))) : E (G (A (G ((NOT FIREABLE(Enolase) OR FIREABLE(Glutathione_reductose)))))) : E (F (((FIREABLE(GAP_dehydrogenase) OR (FIREABLE(Glutathione_oxidation) AND FIREABLE(Phosphoglycerate_mutase))) AND FIREABLE(Transaldolase)))) : E (F (E (X (FIREABLE(Lactate_dehydrogenase))))) : E (F (E (F ((FIREABLE(Transketolase2) AND FIREABLE(Phosphofructokinase) AND FIREABLE(TIM_backward)))))) : E (((NOT FIREABLE(Glutathione_oxidation) OR NOT FIREABLE(Transketolase2)) U ((FIREABLE(Aldolase) AND FIREABLE(generate) AND NOT FIREABLE(G6P_dehydrogenase)) AND E (X (FIREABLE(Ru5P_isomerase))))))
lola: rewrite Frontend/Parser/formula_rewrite.k:446
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:335
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:318
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:392
lola: rewrite Frontend/Parser/formula_rewrite.k:476
lola: rewrite Frontend/Parser/formula_rewrite.k:395
lola: rewrite Frontend/Parser/formula_rewrite.k:401
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 223 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G (E (F (A (X (FIREABLE(G6P_dehydrogenase)))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:734
lola: rewrite Frontend/Parser/formula_rewrite.k:719
lola: rewrite Frontend/Parser/formula_rewrite.k:737
lola: processed formula: NOT(E(TRUE U NOT(E(TRUE U AX(FIREABLE(G6P_dehydrogenase))))))
lola: processed formula length: 61
lola: 24 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 1042977 markings, 8295343 edges, 208595 markings/sec, 0 secs
lola: 2021232 markings, 16617282 edges, 195651 markings/sec, 5 secs
lola: 2883720 markings, 24460849 edges, 172498 markings/sec, 10 secs
lola: 3787380 markings, 32502944 edges, 180732 markings/sec, 15 secs
lola: 4602584 markings, 39990091 edges, 163041 markings/sec, 20 secs
lola: 5513967 markings, 48071247 edges, 182277 markings/sec, 25 secs
lola: 6326464 markings, 55593647 edges, 162499 markings/sec, 30 secs
lola: 7103354 markings, 63326508 edges, 155378 markings/sec, 35 secs
lola: 7792467 markings, 70307917 edges, 137823 markings/sec, 40 secs
lola: 8687577 markings, 78323172 edges, 179022 markings/sec, 45 secs
lola: 9518510 markings, 85830539 edges, 166187 markings/sec, 50 secs
lola: 10365921 markings, 93487758 edges, 169482 markings/sec, 55 secs
lola: 11225347 markings, 101202665 edges, 171885 markings/sec, 60 secs
lola: 12081313 markings, 109009956 edges, 171193 markings/sec, 65 secs
lola: 12883386 markings, 116723122 edges, 160415 markings/sec, 70 secs
lola: 13592760 markings, 123868822 edges, 141875 markings/sec, 75 secs
lola: 14336246 markings, 131239264 edges, 148697 markings/sec, 80 secs
lola: 15055002 markings, 138515026 edges, 143751 markings/sec, 85 secs
lola: 15783706 markings, 145734112 edges, 145741 markings/sec, 90 secs
lola: 16503321 markings, 152989290 edges, 143923 markings/sec, 95 secs
lola: 17242204 markings, 160089523 edges, 147777 markings/sec, 100 secs
lola: 18063301 markings, 167538460 edges, 164219 markings/sec, 105 secs
lola: 18833759 markings, 174743766 edges, 154092 markings/sec, 110 secs
lola: 19535638 markings, 181817597 edges, 140376 markings/sec, 115 secs
lola: 20258825 markings, 188797680 edges, 144637 markings/sec, 120 secs
lola: 21118792 markings, 196601331 edges, 171993 markings/sec, 125 secs
lola: 21932360 markings, 204231179 edges, 162714 markings/sec, 130 secs
lola: 22662052 markings, 211605389 edges, 145938 markings/sec, 135 secs
lola: 23379646 markings, 218767269 edges, 143519 markings/sec, 140 secs
lola: 24107327 markings, 226072308 edges, 145536 markings/sec, 145 secs
lola: 24793378 markings, 232982925 edges, 137210 markings/sec, 150 secs
lola: 25529714 markings, 240306950 edges, 147267 markings/sec, 155 secs
lola: 26179962 markings, 246916792 edges, 130050 markings/sec, 160 secs
lola: 26941607 markings, 254403011 edges, 152329 markings/sec, 165 secs
lola: 27588879 markings, 261033377 edges, 129454 markings/sec, 170 secs
lola: 28249720 markings, 268136571 edges, 132168 markings/sec, 175 secs
lola: 28841792 markings, 274700047 edges, 118414 markings/sec, 180 secs
lola: 29519009 markings, 281461215 edges, 135443 markings/sec, 185 secs
lola: 30329556 markings, 288847829 edges, 162109 markings/sec, 190 secs
lola: 31094820 markings, 295996722 edges, 153053 markings/sec, 195 secs
lola: 31789182 markings, 303002472 edges, 138872 markings/sec, 200 secs
lola: 32523133 markings, 309803999 edges, 146790 markings/sec, 205 secs
lola: 33397087 markings, 316885701 edges, 174791 markings/sec, 210 secs
lola: 34287935 markings, 324561642 edges, 178170 markings/sec, 215 secs
lola: local time limit reached - aborting
lola:
preliminary result: unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown
lola: memory consumption: 4203708 KB
lola: time consumption: 223 seconds
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 1 will run for 223 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E ((A (X (NOT FIREABLE(Ru5P_epimerase))) U (FIREABLE(Lactate_dehydrogenase) AND ((FIREABLE(G6P_dehydrogenase) AND FIREABLE(remove)) OR NOT FIREABLE(Aldolase)))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:734
lola: rewrite Frontend/Parser/formula_rewrite.k:726
lola: processed formula: E(AX(NOT FIREABLE(Ru5P_epimerase)) U (FIREABLE(Lactate_dehydrogenase) AND ((FIREABLE(G6P_dehydrogenase) AND FIREABLE(remove)) OR NOT FIREABLE(Aldolase))))
lola: processed formula length: 155
lola: 23 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: no
lola: produced by: CTL model checker
lola: The net does not satisfy the given formula.
lola: 3722 markings, 6831 edges
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-2 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 2 will run for 239 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (((FIREABLE(Glutathione_oxidation) OR E (F ((FIREABLE(Enolase) AND FIREABLE(Ru5P_isomerase))))) AND E (F (FIREABLE(Hexokinase)))) OR E (X (A ((FIREABLE(Enolase) U FIREABLE(Ru5P_epimerase))))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: ========================================
lola: subprocess 2 will run for 239 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: FIREABLE(Glutathione_oxidation)
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: FIREABLE(Glutathione_oxidation)
lola: processed formula length: 31
lola: 21 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: preprocessing
lola: The net violates the given property already in its initial state.
lola: 0 markings, 0 edges
lola: ========================================
lola: subprocess 3 will run for 257 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Hexokinase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F (FIREABLE(Hexokinase)))
lola: processed formula length: 28
lola: 22 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: FIREABLE(Hexokinase)
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0010N0000000100-CTLFireability-3-0.sara
lola: state equation: calling and running sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 2 markings, 1 edges
lola: ========================================
lola: subprocess 4 will run for 278 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Enolase) AND FIREABLE(Ru5P_isomerase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F ((FIREABLE(Enolase) AND FIREABLE(Ru5P_isomerase))))
lola: processed formula length: 56
lola: sara: try reading problem file GPPP-PT-C0010N0000000100-CTLFireability-3-0.sara.
22 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: (FIREABLE(Enolase) AND FIREABLE(Ru5P_isomerase))
lola: state equation: Generated DNF with 3 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0010N0000000100-CTLFireability-4-0.sara
lola: state equation: calling and running sara
lola: SUBRESULT
lola: result: yes
lola: sara: place or transition ordering is non-deterministic
produced by: state space
lola: The predicate is reachable.
lola: 76 markings, 75 edges
lola: ========================================
lola: SUBRESULT
lola: result: yes
lola: The Boolean predicate is true.
lola: ========================================
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-3 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 3 will run for 257 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (E (F (((NOT FIREABLE(Hexokinase) AND (FIREABLE(Phosphofructokinase) OR FIREABLE(Glutathione_reductose))) OR (FIREABLE(GAP_dehydrogenase) AND FIREABLE(Ru5P_isomerase) AND FIREABLE(Hexokinase) AND FIREABLE(remove))))) AND E (X (((NOT FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Phosphoglycerate_kinase)) OR FIREABLE(Phosphoglycerate_kinase)))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 3 will run for 257 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (((NOT FIREABLE(Hexokinase) AND (FIREABLE(Phosphofructokinase) OR FIREABLE(Glutathione_reductose))) OR (FIREABLE(GAP_dehydrogenase) AND FIREABLE(Ru5P_isomerase) AND FIREABLE(Hexokinase) AND FIREABLE(remove)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F (((NOT FIREABLE(Hexokinase) AND (FIREABLE(Phosphofructokinase) OR FIREABLE(Glutathione_reductose))) OR (FIREABLE(GAP_dehydrogenase) AND FIREABLE(Ru5P_isomerase) AND FIREABLE(Hexokinase) AND FIREABLE(remove)))))
lola: processed formula length: 217
lola: 22 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: ((NOT FIREABLE(Hexokinase) AND (FIREABLE(Phosphofructokinase) OR FIREABLE(Glutathione_reductose))) OR (FIREABLE(GAP_dehydrogenase) AND FIREABLE(Ru5P_isomerase) AND FIREABLE(Hexokinase) AND FIREABLE(remove)))
lola: state equation: Generated DNF with 19 literals and 4 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0010N0000000100-CTLFireability-3-0.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 43 markings, 42 edges
lola: ========================================
lola: subprocess 4 will run for 278 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (X (((NOT FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Phosphoglycerate_kinase)) OR FIREABLE(Phosphoglycerate_kinase))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: processed formula: EX(((NOT FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Phosphoglycerate_kinase)) OR FIREABLE(Phosphoglycerate_kinase)))
lola: processed formula length: 123
lola: 22 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 0 significant temporal operators and needs 0 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: 0 markings, 0 edges
lola: ========================================
lola: SUBRESULT
lola: result: yes
lola: The Boolean predicate is true.
lola: ========================================
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-7 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 4 will run for 278 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (E (X (A (G (NOT FIREABLE(Enolase))))) OR FIREABLE(Transketolase1))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 4 will run for 278 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: FIREABLE(Transketolase1)
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: FIREABLE(Transketolase1)
lola: processed formula length: 24
lola: 21 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: preprocessing
lola: The net violates the given property already in its initial state.
lola: 0 markings, 0 edges
lola: ========================================
lola: subprocess 5 will run for 304 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (X (A (G (NOT FIREABLE(Enolase)))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:737
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: processed formula: EX(NOT(E(TRUE U FIREABLE(Enolase))))
lola: processed formula length: 36
lola: 24 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: no
lola: produced by: CTL model checker
lola: The net does not satisfy the given formula.
lola: 519 markings, 639 edges
lola: ========================================
lola: SUBRESULT
lola: result: no
lola: The Boolean predicate is false.
lola: ========================================
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-8 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 5 will run for 304 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (X (A (F (FIREABLE(TIM_backward)))))
lola: ========================================
lola: SUBTASK
lola: checking eventual occurrence from all successors
lola: rewrite Frontend/Parser/formula_rewrite.k:664
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: NOT FIREABLE(TIM_backward)
lola: processed formula length: 26
lola: 23 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space /EXEG)
lola: state space: using reachability graph (EXEG version) (--search=depth)
lola: state space: using invisibility based stubborn set method (--stubborn=tarjan)
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: state space /EXEG
lola: The predicate eventually occurs from all successors.
lola: 597 markings, 643 edges
lola: ========================================
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-10 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 6 will run for 334 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (X (E (F (FIREABLE(Lactate_dehydrogenase)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability from a successor
lola: rewrite Frontend/Parser/formula_rewrite.k:626
lola: processed formula: FIREABLE(Lactate_dehydrogenase)
lola: processed formula length: 31
lola: 22 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space /EXEF)
lola: state space: using reachability graph (EXef version) (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: state space /EXEF
lola: The predicate is reachable from some successor.
lola: 18 markings, 17 edges
lola: ========================================
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-13 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 7 will run for 371 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (((NOT FIREABLE(Glutathione_oxidation) OR NOT FIREABLE(Transketolase2)) U ((FIREABLE(Aldolase) AND FIREABLE(generate) AND NOT FIREABLE(G6P_dehydrogenase)) AND E (X (FIREABLE(Ru5P_isomerase))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:726
lola: processed formula: E((NOT FIREABLE(Glutathione_oxidation) OR NOT FIREABLE(Transketolase2)) U ((FIREABLE(Aldolase) AND FIREABLE(generate) AND NOT FIREABLE(G6P_dehydrogenase)) AND EX(FIREABLE(Ru5P_isomerase))))
lola: processed formula length: 190
lola: 23 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 1355454 markings, 8139451 edges, 271091 markings/sec, 0 secs
lola: 2595200 markings, 16543318 edges, 247949 markings/sec, 5 secs
lola: 3718696 markings, 24445294 edges, 224699 markings/sec, 10 secs
lola: 4979747 markings, 32048206 edges, 252210 markings/sec, 15 secs
lola: 6085527 markings, 40241351 edges, 221156 markings/sec, 20 secs
lola: 7192797 markings, 48194688 edges, 221454 markings/sec, 25 secs
lola: 8152973 markings, 55576445 edges, 192035 markings/sec, 30 secs
lola: 9343602 markings, 62916837 edges, 238126 markings/sec, 35 secs
lola: 10443646 markings, 70696635 edges, 220009 markings/sec, 40 secs
lola: 11572256 markings, 78746557 edges, 225722 markings/sec, 45 secs
lola: 12613468 markings, 86672140 edges, 208242 markings/sec, 50 secs
lola: 13745526 markings, 94695750 edges, 226412 markings/sec, 55 secs
lola: 14667758 markings, 101924180 edges, 184446 markings/sec, 60 secs
lola: 15653377 markings, 109080237 edges, 197124 markings/sec, 65 secs
lola: 16689408 markings, 116130289 edges, 207206 markings/sec, 70 secs
lola: 17697377 markings, 124112146 edges, 201594 markings/sec, 75 secs
lola: 18595163 markings, 131377583 edges, 179557 markings/sec, 80 secs
lola: 19640833 markings, 138264209 edges, 209134 markings/sec, 85 secs
lola: 20722339 markings, 146392626 edges, 216301 markings/sec, 90 secs
lola: 21681409 markings, 154048537 edges, 191814 markings/sec, 95 secs
lola: 22815874 markings, 162013746 edges, 226893 markings/sec, 100 secs
lola: 23789982 markings, 169471091 edges, 194822 markings/sec, 105 secs
lola: 24709327 markings, 176619171 edges, 183869 markings/sec, 110 secs
lola: 25584399 markings, 183616310 edges, 175014 markings/sec, 115 secs
lola: 26602540 markings, 190289259 edges, 203628 markings/sec, 120 secs
lola: 27587194 markings, 197962601 edges, 196931 markings/sec, 125 secs
lola: 28531906 markings, 205733964 edges, 188942 markings/sec, 130 secs
lola: 29356392 markings, 212593152 edges, 164897 markings/sec, 135 secs
lola: 30153548 markings, 219486067 edges, 159431 markings/sec, 140 secs
lola: 31109372 markings, 226046163 edges, 191165 markings/sec, 145 secs
lola: 32220227 markings, 233832409 edges, 222171 markings/sec, 150 secs
lola: 33350209 markings, 241701481 edges, 225996 markings/sec, 155 secs
lola: 34333213 markings, 249520308 edges, 196601 markings/sec, 160 secs
lola: 35275324 markings, 256995125 edges, 188422 markings/sec, 165 secs
lola: 36375380 markings, 264786035 edges, 220011 markings/sec, 170 secs
lola: 37391801 markings, 272362414 edges, 203284 markings/sec, 175 secs
lola: 38232456 markings, 279168528 edges, 168131 markings/sec, 180 secs
lola: 39100121 markings, 286180818 edges, 173533 markings/sec, 185 secs
lola: 40116559 markings, 293052602 edges, 203288 markings/sec, 190 secs
lola: 40970017 markings, 299555466 edges, 170692 markings/sec, 195 secs
lola: 41953643 markings, 307183380 edges, 196725 markings/sec, 200 secs
lola: 42804266 markings, 314722839 edges, 170125 markings/sec, 205 secs
lola: 43751106 markings, 322307999 edges, 189368 markings/sec, 210 secs
lola: 44554228 markings, 329273705 edges, 160624 markings/sec, 215 secs
lola: 45329120 markings, 336055303 edges, 154978 markings/sec, 220 secs
lola: 46213138 markings, 342622551 edges, 176804 markings/sec, 225 secs
lola: 47076681 markings, 349365368 edges, 172709 markings/sec, 230 secs
lola: 48061578 markings, 357122978 edges, 196979 markings/sec, 235 secs
lola: 48913890 markings, 364151530 edges, 170462 markings/sec, 240 secs
lola: 50019239 markings, 371094871 edges, 221070 markings/sec, 245 secs
lola: 51036989 markings, 378930823 edges, 203550 markings/sec, 250 secs
lola: 51982765 markings, 386463004 edges, 189155 markings/sec, 255 secs
lola: 52890095 markings, 393684030 edges, 181466 markings/sec, 260 secs
lola: 53967706 markings, 401364927 edges, 215522 markings/sec, 265 secs
lola: 55022496 markings, 408976631 edges, 210958 markings/sec, 270 secs
lola: 55818686 markings, 415644771 edges, 159238 markings/sec, 275 secs
lola: 56740770 markings, 422781353 edges, 184417 markings/sec, 280 secs
lola: 57547420 markings, 429593865 edges, 161330 markings/sec, 285 secs
lola: 58589474 markings, 436603097 edges, 208411 markings/sec, 290 secs
lola: 59449470 markings, 443200160 edges, 171999 markings/sec, 295 secs
lola: 60445331 markings, 450871800 edges, 199172 markings/sec, 300 secs
lola: 61298469 markings, 458523309 edges, 170628 markings/sec, 305 secs
lola: 62190044 markings, 466052657 edges, 178315 markings/sec, 310 secs
lola: 63142428 markings, 473782172 edges, 190477 markings/sec, 315 secs
lola: 63907378 markings, 480629299 edges, 152990 markings/sec, 320 secs
lola: 64696033 markings, 487494036 edges, 157731 markings/sec, 325 secs
lola: 65441003 markings, 494204226 edges, 148994 markings/sec, 330 secs
lola: 66286226 markings, 500530686 edges, 169045 markings/sec, 335 secs
lola: 67239573 markings, 507891910 edges, 190669 markings/sec, 340 secs
lola: 68168948 markings, 515684181 edges, 185875 markings/sec, 345 secs
lola: 69068805 markings, 523079311 edges, 179971 markings/sec, 350 secs
lola: 69875478 markings, 530029672 edges, 161335 markings/sec, 355 secs
lola: 70848118 markings, 536714118 edges, 194528 markings/sec, 360 secs
lola: 71969709 markings, 544578561 edges, 224318 markings/sec, 365 secs
lola: local time limit reached - aborting
lola:
preliminary result: unknown unknown no yes unknown unknown unknown yes no unknown yes unknown unknown yes unknown unknown
lola: memory consumption: 5648800 KB
lola: time consumption: 595 seconds
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 8 will run for 371 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Enolase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F (FIREABLE(Enolase)))
lola: processed formula length: 25
lola: 22 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: FIREABLE(Enolase)
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0010N0000000100-CTLFireability-8-0.sara
lola: lola: state equation: calling and running sara
SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 17 markings, 16 edges
lola:
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-4 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
========================================
lola: subprocess 9 will run for 425 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Enolase) AND FIREABLE(Pyruvate_kinase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F ((FIREABLE(Enolase) AND FIREABLE(Pyruvate_kinase))))
lola: processed formula length: 57
lola: 22 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: (FIREABLE(Enolase) AND FIREABLE(Pyruvate_kinase))
lola: state equation: Generated DNF with 3 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0010N0000000100-CTLFireability-9-0.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 22 markings, 21 edges
lola: ========================================
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-1 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 10 will run for 495 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Enolase) OR FIREABLE(Glutathione_reductose))))
lola: ========================================
lola: SUBTASK
sara: try reading problem file GPPP-PT-C0010N0000000100-CTLFireability-8-0.sara.
sara: place or transition ordering is non-deterministic
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: A (G ((NOT FIREABLE(Enolase) OR FIREABLE(Glutathione_reductose))))
lola: processed formula length: 67
lola: 23 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: formula 0: (FIREABLE(Enolase) AND NOT FIREABLE(Glutathione_reductose))
lola: state equation: Generated DNF with 4 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0010N0000000100-CTLFireability-10-0.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 21 markings, 20 edges
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-11 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 11 will run for 595 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Transketolase2) AND FIREABLE(Phosphofructokinase) AND FIREABLE(TIM_backward))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: lola: ======================================== rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F ((FIREABLE(Transketolase2) AND FIREABLE(Phosphofructokinase) AND FIREABLE(TIM_backward))))
lola: processed formula length: 95
lola: 22 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola:
STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: (FIREABLE(Transketolase2) AND FIREABLE(Phosphofructokinase) AND FIREABLE(TIM_backward))
lola: state equation: Generated DNF with 5 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0010N0000000100-CTLFireability-11-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0010N0000000100-CTLFireability-11-0.sara.
sara: place or transition ordering is non-deterministic
lola: state equation 0: solution produced
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is reachable.
lola: ========================================
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-14 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 12 will run for 743 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (((FIREABLE(GAP_dehydrogenase) OR (FIREABLE(Glutathione_oxidation) AND FIREABLE(Phosphoglycerate_mutase))) AND FIREABLE(Transaldolase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F (((FIREABLE(GAP_dehydrogenase) OR (FIREABLE(Glutathione_oxidation) AND FIREABLE(Phosphoglycerate_mutase))) AND FIREABLE(Transaldolase))))
lola: processed formula length: 143
lola: 22 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: ((FIREABLE(GAP_dehydrogenase) OR (FIREABLE(Glutathione_oxidation) AND FIREABLE(Phosphoglycerate_mutase))) AND FIREABLE(Transaldolase))
lola: state equation: Generated DNF with 12 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0010N0000000100-CTLFireability-12-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0010N0000000100-CTLFireability-12-0.sara.
sara: place or transition ordering is non-deterministic
lola: sara is running 0 secs || 3219134 markings, 8889629 edges, 643827 markings/sec, 0 secs
lola: sara is running 5 secs || 6380918 markings, 17945761 edges, 632357 markings/sec, 5 secs
lola: sara is running 10 secs || 9062142 markings, 26626185 edges, 536245 markings/sec, 10 secs
lola: sara is running 15 secs || 11977826 markings, 35641561 edges, 583137 markings/sec, 15 secs
lola: sara is running 20 secs || 14634247 markings, 44265868 edges, 531284 markings/sec, 20 secs
lola: sara is running 25 secs || 17272491 markings, 52983417 edges, 527649 markings/sec, 25 secs
lola: sara is running 30 secs || 19909133 markings, 61254661 edges, 527328 markings/sec, 30 secs
lola: sara is running 35 secs || 22452975 markings, 69676799 edges, 508768 markings/sec, 35 secs
lola: sara is running 40 secs || 24652893 markings, 77750028 edges, 439984 markings/sec, 40 secs
lola: sara is running 45 secs || 26408886 markings, 83728672 edges, 351199 markings/sec, 45 secs
lola: sara is running 50 secs || 28768691 markings, 91773159 edges, 471961 markings/sec, 50 secs
lola: sara is running 55 secs || 31075795 markings, 99889078 edges, 461421 markings/sec, 55 secs
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: 31833671 markings, 102583612 edges
lola: ========================================
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-12 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 13 will run for 971 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (E (G (FIREABLE(remove)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability of possible preservation
lola: rewrite Frontend/Parser/formula_rewrite.k:640
lola: processed formula: FIREABLE(remove)
lola: processed formula length: 16
lola: 22 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space /EFEG)
lola: state space: using reachability graph (EFEG version) (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: 4820363 markings, 8216104 edges, 964073 markings/sec, 0 secs
lola: SUBRESULT
lola: result: no
lola: produced by: state space /EFEG
lola: The predicate is not possibly preserved from any reachable marking.
lola: 8909416 markings, 15360787 edges
lola: ========================================
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-5 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 14 will run for 1452 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (E (F (((NOT FIREABLE(Aldolase) OR NOT FIREABLE(TIM_backward)) AND FIREABLE(Pyruvate_kinase)))) AND NOT FIREABLE(GAP_dehydrogenase))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 14 will run for 1452 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: NOT FIREABLE(GAP_dehydrogenase)
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: NOT FIREABLE(GAP_dehydrogenase)
lola: processed formula length: 31
lola: 21 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: preprocessing
lola: The net satisfies the property already in its initial state.
lola: 0 markings, 0 edges
lola: ========================================
lola: subprocess 15 will run for 2904 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (((NOT FIREABLE(Aldolase) OR NOT FIREABLE(TIM_backward)) AND FIREABLE(Pyruvate_kinase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F (((NOT FIREABLE(Aldolase) OR NOT FIREABLE(TIM_backward)) AND FIREABLE(Pyruvate_kinase))))
lola: processed formula length: 95
lola: 22 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: ((NOT FIREABLE(Aldolase) OR NOT FIREABLE(TIM_backward)) AND FIREABLE(Pyruvate_kinase))
lola: state equation: Generated DNF with 6 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0010N0000000100-CTLFireability-15-0.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 18 markings, 17 edges
lola: ========================================
lola: SUBRESULT
lola: result: yes
lola: The Boolean predicate is true.
lola: ========================================
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-6 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 15 will run for 2904 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (A (F (A (G (NOT FIREABLE(remove))))) AND NOT FIREABLE(Phosphoglycerate_mutase))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 15 will run for 2904 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: NOT FIREABLE(Phosphoglycerate_mutase)
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: NOT FIREABLE(Phosphoglycerate_mutase)
lola: processed formula length: 37
lola: 21 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: preprocessing
lola: The net satisfies the property already in its initial state.
lola: 0 markings, 0 edges
lola: ========================================
lola: Child process aborted or communication problem between parent and child process
lola: SUBRESULT
lola: result: unknown
lola: The Boolean predicate may be true or false.
lola: ========================================
lola: ========================================
lola: ...considering subproblem: A (G (E (F (A (X (FIREABLE(G6P_dehydrogenase)))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:734
lola: rewrite Frontend/Parser/formula_rewrite.k:719
lola: rewrite Frontend/Parser/formula_rewrite.k:737
lola: processed formula: NOT(E(TRUE U NOT(E(TRUE U AX(FIREABLE(G6P_dehydrogenase))))))
lola: processed formula length: 61
lola: 24 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
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lola: 131752485 markings, 1293866896 edges, 2606 markings/sec, 1000 secs
lola: Child process aborted or communication problem between parent and child process
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-0 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: ========================================
lola: ...considering subproblem: E (((NOT FIREABLE(Glutathione_oxidation) OR NOT FIREABLE(Transketolase2)) U ((FIREABLE(Aldolase) AND FIREABLE(generate) AND NOT FIREABLE(G6P_dehydrogenase)) AND E (X (FIREABLE(Ru5P_isomerase))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: rewrite Frontend/Parser/formula_rewrite.k:726
lola: processed formula: E((NOT FIREABLE(Glutathione_oxidation) OR NOT FIREABLE(Transketolase2)) U ((FIREABLE(Aldolase) AND FIREABLE(generate) AND NOT FIREABLE(G6P_dehydrogenase)) AND EX(FIREABLE(Ru5P_isomerase))))
lola: processed formula length: 190
lola: 23 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 1421857 markings, 8553999 edges, 284371 markings/sec, 0 secs
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lola: 207315502 markings, 1640708678 edges, 751 markings/sec, 1250 secs
lola: Child process aborted or communication problem between parent and child process
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-15 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: ========================================
lola: ...considering subproblem: (A (F (A (G (NOT FIREABLE(remove))))) AND NOT FIREABLE(Phosphoglycerate_mutase))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: ========================================
lola: ...considering subproblem: NOT FIREABLE(Phosphoglycerate_mutase)
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: NOT FIREABLE(Phosphoglycerate_mutase)
lola: processed formula length: 37
lola: 21 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: preprocessing
lola: The net satisfies the property already in its initial state.
lola: 0 markings, 0 edges
lola: ========================================
lola: ========================================
lola: ...considering subproblem: A (F (A (G (NOT FIREABLE(remove)))))
lola: ========================================
lola: SUBTASK
lola: checking eventual invariance
lola: rewrite Frontend/Parser/formula_rewrite.k:665
lola: rewrite Frontend/Parser/formula_rewrite.k:695
lola: processed formula: FIREABLE(remove)
lola: processed formula length: 16
lola: 23 rewrites
lola: closed formula file GPPP-PT-C0010N0000000100-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space /EGEF)
lola: state space: using reachability graph (EGEF version) (--search=depth)
lola: state space: using ctl preserving stubborn set method (--stubborn=tarjan)
lola: RUNNING
lola: 5320470 markings, 8715577 edges, 1064094 markings/sec, 0 secs
lola: 9789328 markings, 16387508 edges, 893772 markings/sec, 5 secs
lola: 14007515 markings, 23586199 edges, 843637 markings/sec, 10 secs
lola: 18100910 markings, 30496037 edges, 818679 markings/sec, 15 secs
lola: 22645039 markings, 38018013 edges, 908826 markings/sec, 20 secs
lola: SUBRESULT
lola: result: yes
lola: produced by: state space /EGEF
lola: The predicate is eventually invariant.
lola: 24975413 markings, 41863699 edges
lola: ========================================
lola: SUBRESULT
lola: result: yes
lola: The Boolean predicate is true.
lola: ========================================
FORMULA GPPP-PT-C0010N0000000100-CTLFireability-9 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: RESULT
lola:
SUMMARY: unknown yes no yes yes no yes yes no yes yes no no yes yes unknown
lola:
preliminary result: unknown yes no yes yes no yes yes no yes yes no no yes yes unknown
lola: memory consumption: 13476 KB
lola: time consumption: 2969 seconds
BK_STOP 1526724016993
--------------------
content from stderr:
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0010N0000000100"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="lola"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0010N0000000100.tgz
mv GPPP-PT-C0010N0000000100 execution
cd execution
pwd
ls -lh
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool lola"
echo " Input is GPPP-PT-C0010N0000000100, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r088-blw7-152649998300291"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;