Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
/home/mcc/execution
total 4.8M
-rw-r--r-- 1 mcc users 4.3K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 21K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.9K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.8K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.5K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 9.4K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.2K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 113 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 351 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.4K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 8 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 4.7M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool mcc4mcc-full
Input is Diffusion2D-PT-D40N010, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r082-blw3-152649949500261
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-00
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-01
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-02
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-03
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-04
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-05
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-06
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-07
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-08
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-09
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-10
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-11
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-12
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-13
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-14
FORMULA_NAME Diffusion2D-PT-D40N010-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1527408449940


BK_STOP 1527408673858

--------------------
content from stderr:

Prefix is 65b80f64.
Reading known information in /usr/share/mcc4mcc/65b80f64-known.json.
Reading learned information in /usr/share/mcc4mcc/65b80f64-learned.json.
Reading value translations in /usr/share/mcc4mcc/65b80f64-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using Diffusion2D-PT-D40N010 as instance name.
Using Diffusion2D as model name.
Using algorithm or tool decision-tree.
Model characteristics are: {'Examination': 'UpperBounds', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': True, 'Simple Free Choice': True, 'Extended Free Choice': True, 'State Machine': True, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': True, 'Source Place': False, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': True, 'Conservative': True, 'Sub-Conservative': True, 'Nested Units': False, 'Safe': False, 'Deadlock': False, 'Reversible': True, 'Quasi Live': True, 'Live': True}.
Known tools are: [{'Time': 61278, 'Memory': 700.03, 'Tool': 'itstools'}, {'Time': 66149, 'Memory': 668.56, 'Tool': 'itstools'}, {'Time': 1001701, 'Memory': 6077.2, 'Tool': 'gspn'}, {'Time': 1073432, 'Memory': 6106.03, 'Tool': 'gspn'}, {'Time': 3540133, 'Memory': 599.71, 'Tool': 'lola'}, {'Time': 3540330, 'Memory': 599.38, 'Tool': 'lola'}].
Learned tools are: [{'Tool': 'lola'}].
Learned tool lola is 57.77167988511374x far from the best tool itstools.
UpperBounds lola Diffusion2D-PT-D40N010...

Time: 3600 - MCC
----- Start make prepare stdout -----
----- Start make prepare stderr -----
===========================================================================================
Diffusion2D-PT-D40N010: translating PT Petri net model.pnml into LoLA format
===========================================================================================
translating PT Petri net complete


checking for too many tokens
===========================================================================================
Diffusion2D-PT-D40N010: translating PT formula UpperBounds into LoLA format
===========================================================================================
translating formula complete
touch formulae;
----- Start make result stderr -----
----- Start make result stdout -----
UpperBounds @ Diffusion2D-PT-D40N010 @ 3539 seconds
Makefile:222: recipe for target 'verify' failed
----- Start make result stdout -----
make: [verify] Error 134 (ignored)
----- Start make result stderr -----
lola: LoLA will run for 3539 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 13924/65536 symbol table entries, 3777 collisions
lola: preprocessing...
lola: finding significant places
lola: 1600 places, 12324 transitions, 1599 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 1600 transition conflict sets
lola: TASK
lola: reading formula from Diffusion2D-PT-D40N010-UpperBounds.task
lola: MAX(cAMP__9_14_) : MAX(cAMP__5_9_) : MAX(cAMP__26_16_) : MAX(cAMP__20_37_) : MAX(cAMP__11_14_) : MAX(cAMP__28_29_) : MAX(cAMP__39_34_) : MAX(cAMP__33_22_) : MAX(cAMP__27_30_) : MAX(cAMP__39_10_) : MAX(cAMP__11_11_) : MAX(cAMP__10_27_) : MAX(cAMP__39_21_) : MAX(cAMP__25_26_) : MAX(cAMP__21_28_) : MAX(cAMP__10_38_)
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: MAX(cAMP__9_14_)
lola: ========================================
lola: SUBTASK
lola: computing bound of an expression
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 6396 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH
lola: using bound preserving stubborn set method with insertion algorithm(--stubborn=tarjan)
lola: RUNNING
lola: 9750 markings, 34128 edges, 1950 markings/sec, 0 secs
lola: 19982 markings, 71687 edges, 2046 markings/sec, 5 secs
lola: 30320 markings, 109068 edges, 2068 markings/sec, 10 secs
lola: 40438 markings, 146978 edges, 2024 markings/sec, 15 secs
lola: 50466 markings, 183942 edges, 2006 markings/sec, 20 secs
lola: 60434 markings, 221159 edges, 1994 markings/sec, 25 secs
lola: 70424 markings, 257664 edges, 1998 markings/sec, 30 secs
lola: 80445 markings, 293917 edges, 2004 markings/sec, 35 secs
lola: 90528 markings, 330524 edges, 2017 markings/sec, 40 secs
lola: 100606 markings, 366932 edges, 2016 markings/sec, 45 secs
lola: 110930 markings, 404139 edges, 2065 markings/sec, 50 secs
lola: 121152 markings, 441124 edges, 2044 markings/sec, 55 secs
lola: 131133 markings, 477261 edges, 1996 markings/sec, 60 secs
lola: 141091 markings, 513142 edges, 1992 markings/sec, 65 secs
lola: 151024 markings, 549546 edges, 1987 markings/sec, 70 secs
lola: 160914 markings, 585592 edges, 1978 markings/sec, 75 secs
lola: 170844 markings, 622559 edges, 1986 markings/sec, 80 secs
lola: 180774 markings, 659827 edges, 1986 markings/sec, 85 secs
lola: 190736 markings, 696186 edges, 1992 markings/sec, 90 secs
lola: 200678 markings, 732844 edges, 1988 markings/sec, 95 secs
lola: 210584 markings, 769546 edges, 1981 markings/sec, 100 secs
lola: 220473 markings, 806421 edges, 1978 markings/sec, 105 secs
lola: 230399 markings, 842835 edges, 1985 markings/sec, 110 secs
lola: 240352 markings, 880100 edges, 1991 markings/sec, 115 secs
lola: 250244 markings, 917584 edges, 1978 markings/sec, 120 secs
lola: 260137 markings, 953577 edges, 1979 markings/sec, 125 secs
lola: 270114 markings, 991034 edges, 1995 markings/sec, 130 secs
lola: 280019 markings, 1028461 edges, 1981 markings/sec, 135 secs
lola: 289948 markings, 1064819 edges, 1986 markings/sec, 140 secs
lola: 299886 markings, 1101825 edges, 1988 markings/sec, 145 secs
lola: 309852 markings, 1139005 edges, 1993 markings/sec, 150 secs
lola: 319802 markings, 1175729 edges, 1990 markings/sec, 155 secs
lola: 329763 markings, 1212362 edges, 1992 markings/sec, 160 secs
lola: 339776 markings, 1248772 edges, 2003 markings/sec, 165 secs
lola: 349819 markings, 1284833 edges, 2009 markings/sec, 170 secs
lola: 359800 markings, 1320493 edges, 1996 markings/sec, 175 secs
lola: 369692 markings, 1356779 edges, 1978 markings/sec, 180 secs
lola: 379594 markings, 1392586 edges, 1980 markings/sec, 185 secs
lola: 389512 markings, 1428545 edges, 1984 markings/sec, 190 secs
lola: 399392 markings, 1465879 edges, 1976 markings/sec, 195 secs
lola: 409284 markings, 1503590 edges, 1978 markings/sec, 200 secs
lola: 419213 markings, 1540729 edges, 1986 markings/sec, 205 secs
lola: 429150 markings, 1576544 edges, 1987 markings/sec, 210 secs
lola: 439025 markings, 1614455 edges, 1975 markings/sec, 215 secs
lola: local time limit reached - aborting
lola: Child process aborted or communication problem between parent and child process
terminate called after throwing an instance of 'std::runtime_error'
what(): parse error at position 0: unexpected character, last read: '
Aborted (core dumped)
FORMULA Diffusion2D-PT-D40N010-UpperBounds-0 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-1 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-2 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-3 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-4 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-5 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-6 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-7 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-8 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-9 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-10 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-11 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-12 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-13 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-14 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D40N010-UpperBounds-15 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
----- Kill lola and sara stdout -----
----- Kill lola and sara stderr -----
----- Finished stderr -----
----- Finished stdout -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Diffusion2D-PT-D40N010"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="mcc4mcc-full"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Diffusion2D-PT-D40N010.tgz
mv Diffusion2D-PT-D40N010 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool mcc4mcc-full"
echo " Input is Diffusion2D-PT-D40N010, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r082-blw3-152649949500261"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;