Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
/home/mcc/execution
total 240K
-rw-r--r-- 1 mcc users 4.7K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 25K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.7K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.8K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.7K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.0K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.2K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.5K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 21K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 113 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 351 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.4K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 8 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 55K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool mcc4mcc-full
Input is Diffusion2D-PT-D05N010, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r082-blw3-152649949300114
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-00
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-01
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-02
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-03
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-04
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-05
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-06
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-07
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-08
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-09
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-10
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-11
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-12
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-13
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-14
FORMULA_NAME Diffusion2D-PT-D05N010-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1527406135650


BK_STOP 1527406359684

--------------------
content from stderr:

Prefix is 65b80f64.
Reading known information in /usr/share/mcc4mcc/65b80f64-known.json.
Reading learned information in /usr/share/mcc4mcc/65b80f64-learned.json.
Reading value translations in /usr/share/mcc4mcc/65b80f64-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using Diffusion2D-PT-D05N010 as instance name.
Using Diffusion2D as model name.
Using algorithm or tool decision-tree.
Model characteristics are: {'Examination': 'UpperBounds', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': True, 'Simple Free Choice': True, 'Extended Free Choice': True, 'State Machine': True, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': True, 'Source Place': False, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': True, 'Conservative': True, 'Sub-Conservative': True, 'Nested Units': False, 'Safe': False, 'Deadlock': False, 'Reversible': True, 'Quasi Live': True, 'Live': True}.
Known tools are: [{'Time': 215, 'Memory': 101.45, 'Tool': 'gspn'}, {'Time': 3916, 'Memory': 222.07, 'Tool': 'itstools'}, {'Time': 4031, 'Memory': 159.82, 'Tool': 'gspn'}, {'Time': 4156, 'Memory': 263, 'Tool': 'itstools'}, {'Time': 15661, 'Memory': 7483.09, 'Tool': 'marcie'}, {'Time': 15982, 'Memory': 7483.18, 'Tool': 'marcie'}, {'Time': 3540196, 'Memory': 5993.66, 'Tool': 'lola'}, {'Time': 3540383, 'Memory': 6009.1, 'Tool': 'lola'}].
Learned tools are: [{'Tool': 'lola'}].
Learned tool lola is 16466.027906976746x far from the best tool gspn.
UpperBounds lola Diffusion2D-PT-D05N010...

Time: 3600 - MCC
----- Start make prepare stderr -----
----- Start make prepare stdout -----
===========================================================================================
Diffusion2D-PT-D05N010: translating PT Petri net model.pnml into LoLA format
===========================================================================================
translating PT Petri net complete


checking for too many tokens
===========================================================================================
Diffusion2D-PT-D05N010: translating PT formula UpperBounds into LoLA format
===========================================================================================
translating formula complete
touch formulae;
----- Start make result stdout -----
----- Start make result stderr -----
UpperBounds @ Diffusion2D-PT-D05N010 @ 3540 seconds
make: [verify] Error 134 (ignored)
Makefile:222: recipe for target 'verify' failed
----- Start make result stdout -----
----- Start make result stderr -----
lola: LoLA will run for 3540 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 169/65536 symbol table entries, 4 collisions
lola: preprocessing...
lola: finding significant places
lola: 25 places, 144 transitions, 24 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 25 transition conflict sets
lola: TASK
lola: reading formula from Diffusion2D-PT-D05N010-UpperBounds.task
lola: MAX(cAMP__4_4_) : MAX(cAMP__2_4_) : MAX(cAMP__4_2_) : MAX(cAMP__3_3_) : MAX(cAMP__1_4_) : MAX(cAMP__5_4_) : MAX(cAMP__4_1_) : MAX(cAMP__2_1_) : MAX(cAMP__2_1_) : MAX(cAMP__1_3_) : MAX(cAMP__3_4_) : MAX(cAMP__3_2_) : MAX(cAMP__4_5_) : MAX(cAMP__1_3_) : MAX(cAMP__2_1_) : MAX(cAMP__3_5_)
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: MAX(cAMP__4_4_)
lola: ========================================
lola: SUBTASK
lola: computing bound of an expression
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 96 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH
lola: using bound preserving stubborn set method with insertion algorithm(--stubborn=tarjan)
lola: RUNNING
lola: 1081640 markings, 4058738 edges, 216328 markings/sec, 0 secs
lola: 2185115 markings, 8167862 edges, 220695 markings/sec, 5 secs
lola: 3294647 markings, 12263556 edges, 221906 markings/sec, 10 secs
lola: 4373272 markings, 16325301 edges, 215725 markings/sec, 15 secs
lola: 5444679 markings, 20282321 edges, 214281 markings/sec, 20 secs
lola: 6510489 markings, 24190501 edges, 213162 markings/sec, 25 secs
lola: 7582819 markings, 28200436 edges, 214466 markings/sec, 30 secs
lola: 8618020 markings, 32067922 edges, 207040 markings/sec, 35 secs
lola: 9677614 markings, 35885124 edges, 211919 markings/sec, 40 secs
lola: 10723577 markings, 39663129 edges, 209193 markings/sec, 45 secs
lola: 11751142 markings, 43444372 edges, 205513 markings/sec, 50 secs
lola: 12795647 markings, 47275930 edges, 208901 markings/sec, 55 secs
lola: 13819078 markings, 51076532 edges, 204686 markings/sec, 60 secs
lola: 14827332 markings, 54796575 edges, 201651 markings/sec, 65 secs
lola: 15801608 markings, 58451181 edges, 194855 markings/sec, 70 secs
lola: 16763751 markings, 62017765 edges, 192429 markings/sec, 75 secs
lola: 17661261 markings, 65384728 edges, 179502 markings/sec, 80 secs
lola: 18559993 markings, 68682705 edges, 179746 markings/sec, 85 secs
lola: 19551319 markings, 72305410 edges, 198265 markings/sec, 90 secs
lola: 20531070 markings, 75967448 edges, 195950 markings/sec, 95 secs
lola: 21496278 markings, 79593682 edges, 193042 markings/sec, 100 secs
lola: 22448007 markings, 83130248 edges, 190346 markings/sec, 105 secs
lola: 23426548 markings, 86771011 edges, 195708 markings/sec, 110 secs
lola: 24380246 markings, 90372052 edges, 190740 markings/sec, 115 secs
lola: 25315657 markings, 93919529 edges, 187082 markings/sec, 120 secs
lola: 26242283 markings, 97451436 edges, 185325 markings/sec, 125 secs
lola: 27179843 markings, 100975096 edges, 187512 markings/sec, 130 secs
lola: 28099827 markings, 104531944 edges, 183997 markings/sec, 135 secs
lola: 29014574 markings, 108032334 edges, 182949 markings/sec, 140 secs
lola: 29944683 markings, 111571290 edges, 186022 markings/sec, 145 secs
lola: 30894426 markings, 115126747 edges, 189949 markings/sec, 150 secs
lola: 31807341 markings, 118604494 edges, 182583 markings/sec, 155 secs
lola: 32727477 markings, 122109972 edges, 184027 markings/sec, 160 secs
lola: 33643490 markings, 125583936 edges, 183203 markings/sec, 165 secs
lola: 34557656 markings, 129067331 edges, 182833 markings/sec, 170 secs
lola: 35461225 markings, 132535072 edges, 180714 markings/sec, 175 secs
lola: 36367175 markings, 136029591 edges, 181190 markings/sec, 180 secs
lola: 37280190 markings, 139477356 edges, 182603 markings/sec, 185 secs
lola: 38169829 markings, 142902037 edges, 177928 markings/sec, 190 secs
lola: 39088134 markings, 146333443 edges, 183661 markings/sec, 195 secs
lola: 39978180 markings, 149758967 edges, 178009 markings/sec, 200 secs
lola: 40869984 markings, 153182320 edges, 178361 markings/sec, 205 secs
lola: 41749995 markings, 156595296 edges, 176002 markings/sec, 210 secs
lola: 42625394 markings, 160001531 edges, 175080 markings/sec, 215 secs
lola: local time limit reached - aborting
lola: Child process aborted or communication problem between parent and child process
terminate called after throwing an instance of 'std::runtime_error'
what(): parse error at position 0: unexpected character, last read: 'h'
Aborted (core dumped)
FORMULA Diffusion2D-PT-D05N010-UpperBounds-0 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-1 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-2 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-3 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-4 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-5 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-6 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-7 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-8 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-9 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-10 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-11 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-12 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-13 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-14 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N010-UpperBounds-15 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
----- Kill lola and sara stdout -----
----- Kill lola and sara stderr -----
----- Finished stderr -----
----- Finished stdout -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Diffusion2D-PT-D05N010"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="mcc4mcc-full"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Diffusion2D-PT-D05N010.tgz
mv Diffusion2D-PT-D05N010 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool mcc4mcc-full"
echo " Input is Diffusion2D-PT-D05N010, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r082-blw3-152649949300114"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;