Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
/home/mcc/execution
total 2.2M
-rw-r--r-- 1 mcc users 2.9K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.6K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.5K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 7.6K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.2K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 105 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 343 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.3K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 7 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 2.1M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is Echo-PT-d05r03, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r081-blw3-152649948800478
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Echo-PT-d05r03-UpperBounds-00
FORMULA_NAME Echo-PT-d05r03-UpperBounds-01
FORMULA_NAME Echo-PT-d05r03-UpperBounds-02
FORMULA_NAME Echo-PT-d05r03-UpperBounds-03
FORMULA_NAME Echo-PT-d05r03-UpperBounds-04
FORMULA_NAME Echo-PT-d05r03-UpperBounds-05
FORMULA_NAME Echo-PT-d05r03-UpperBounds-06
FORMULA_NAME Echo-PT-d05r03-UpperBounds-07
FORMULA_NAME Echo-PT-d05r03-UpperBounds-08
FORMULA_NAME Echo-PT-d05r03-UpperBounds-09
FORMULA_NAME Echo-PT-d05r03-UpperBounds-10
FORMULA_NAME Echo-PT-d05r03-UpperBounds-11
FORMULA_NAME Echo-PT-d05r03-UpperBounds-12
FORMULA_NAME Echo-PT-d05r03-UpperBounds-13
FORMULA_NAME Echo-PT-d05r03-UpperBounds-14
FORMULA_NAME Echo-PT-d05r03-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1527393715081

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph6766969759989956019.txt, -o, /tmp/graph6766969759989956019.bin, -w, /tmp/graph6766969759989956019.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph6766969759989956019.bin, -l, -1, -v, -w, /tmp/graph6766969759989956019.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/UpperBounds.pnml.gal, -t, CGAL, -reachable-file, UpperBounds.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/UpperBounds.pnml.gal -t CGAL -reachable-file UpperBounds.prop --nowitness
Loading property file UpperBounds.prop.
Read [bounds] property : Echo-PT-d05r03-UpperBounds-00 with value :i5.u98.p2056
Read [bounds] property : Echo-PT-d05r03-UpperBounds-01 with value :i8.u147.p1378
Read [bounds] property : Echo-PT-d05r03-UpperBounds-02 with value :i6.u160.p3440
Read [bounds] property : Echo-PT-d05r03-UpperBounds-03 with value :i2.u75.p2627
Read [bounds] property : Echo-PT-d05r03-UpperBounds-04 with value :i4.u88.p275
Read [bounds] property : Echo-PT-d05r03-UpperBounds-05 with value :i3.u200.p841
Read [bounds] property : Echo-PT-d05r03-UpperBounds-06 with value :i0.u23.p2972
Read [bounds] property : Echo-PT-d05r03-UpperBounds-07 with value :i6.u137.p1293
Read [bounds] property : Echo-PT-d05r03-UpperBounds-08 with value :i4.u181.p2830
Read [bounds] property : Echo-PT-d05r03-UpperBounds-09 with value :i7.u67.p241
Read [bounds] property : Echo-PT-d05r03-UpperBounds-10 with value :i10.u187.p2306
Read [bounds] property : Echo-PT-d05r03-UpperBounds-11 with value :i1.u171.p2134
Read [bounds] property : Echo-PT-d05r03-UpperBounds-12 with value :i10.u170.p2742
Read [bounds] property : Echo-PT-d05r03-UpperBounds-13 with value :i6.u61.p1769
Read [bounds] property : Echo-PT-d05r03-UpperBounds-14 with value :i6.u138.p1233
Read [bounds] property : Echo-PT-d05r03-UpperBounds-15 with value :i9.u155.p1854
built 149 ordering constraints for composite.
built 393 ordering constraints for composite.
built 523 ordering constraints for composite.
built 599 ordering constraints for composite.
built 724 ordering constraints for composite.
built 657 ordering constraints for composite.
built 607 ordering constraints for composite.
built 606 ordering constraints for composite.
built 674 ordering constraints for composite.
built 483 ordering constraints for composite.
built 566 ordering constraints for composite.
built 330 ordering constraints for composite.
built 499 ordering constraints for composite.

BK_STOP 1527394317594

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution UpperBounds -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination UpperBounds -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 27, 2018 4:01:56 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, UpperBounds, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 27, 2018 4:01:56 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 27, 2018 4:01:57 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 347 ms
May 27, 2018 4:01:57 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3717 places.
May 27, 2018 4:01:57 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3222 transitions.
May 27, 2018 4:01:57 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 27, 2018 4:01:58 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 1057 ms
May 27, 2018 4:01:58 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 583 ms
Begin: Sun May 27 04:02:00 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sun May 27 04:02:00 2018
network size: 3717 nodes, 38084 links, 6444 weight
quality increased from -0.000417505 to 0.509484
end computation: Sun May 27 04:02:00 2018
level 1:
start computation: Sun May 27 04:02:00 2018
network size: 206 nodes, 4328 links, 6444 weight
quality increased from 0.509484 to 0.64044
end computation: Sun May 27 04:02:00 2018
level 2:
start computation: Sun May 27 04:02:00 2018
network size: 21 nodes, 325 links, 6444 weight
quality increased from 0.64044 to 0.648452
end computation: Sun May 27 04:02:00 2018
level 3:
start computation: Sun May 27 04:02:00 2018
network size: 12 nodes, 134 links, 6444 weight
quality increased from 0.648452 to 0.648452
end computation: Sun May 27 04:02:00 2018
End: Sun May 27 04:02:00 2018
Total duration: 0 sec
0.648452
May 27, 2018 4:02:00 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 27, 2018 4:02:00 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 558 ms
May 27, 2018 4:02:00 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 27, 2018 4:02:04 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 8184 redundant transitions.
May 27, 2018 4:02:04 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/UpperBounds.pnml.gal : 126 ms
May 27, 2018 4:02:04 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSTools
INFO: Time to serialize properties into /home/mcc/execution/UpperBounds.prop : 1 ms
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Echo-PT-d05r03"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Echo-PT-d05r03.tgz
mv Echo-PT-d05r03 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is Echo-PT-d05r03, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r081-blw3-152649948800478"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;