Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
/home/mcc/execution
total 3.2M
-rw-r--r-- 1 mcc users 3.7K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.5K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.8K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.9K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 23K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 113 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 351 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 8 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 3.0M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is Diffusion2D-PT-D30N100, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r081-blw3-152649948500250
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-00
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-01
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-02
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-03
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-04
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-05
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-06
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-07
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-08
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-09
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-10
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-11
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-12
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-13
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-14
FORMULA_NAME Diffusion2D-PT-D30N100-ReachabilityCardinality-15

=== Now, execution of the tool begins

BK_START 1527296097141

Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityCardinality.pnml.gal, -t, CGAL, -reachable-file, ReachabilityCardinality.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityCardinality.pnml.gal -t CGAL -reachable-file ReachabilityCardinality.prop --nowitness
Loading property file ReachabilityCardinality.prop.
Read [reachable] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-00 with value :((!((cAMP__25_15_>=2)||(cAMP__3_17_<=cAMP__29_11_)))&&(((cAMP__24_18_>=1)||(cAMP__5_4_>=2))||((cAMP__12_29_<=cAMP__15_1_)||(cAMP__14_23_<=cAMP__8_9_))))
Read [invariant] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-01 with value :((cAMP__28_19_>=3)||(cAMP__27_29_<=cAMP__3_24_))
Read [reachable] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-02 with value :((cAMP__30_30_<=cAMP__10_18_)&&(!((cAMP__11_8_<=cAMP__17_20_)||(cAMP__20_23_<=cAMP__27_5_))))
Read [reachable] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-03 with value :((!((cAMP__28_12_<=cAMP__2_25_)&&(cAMP__30_14_<=cAMP__1_14_)))&&(((cAMP__18_21_<=cAMP__29_18_)||(cAMP__2_9_>=2))||((cAMP__7_19_<=cAMP__18_12_)||(cAMP__14_30_>=2))))
Read [reachable] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-04 with value :((((cAMP__7_3_<=cAMP__9_10_)||(cAMP__23_19_>=2))||((cAMP__21_18_>=2)&&(cAMP__1_3_<=cAMP__21_22_)))&&(cAMP__1_25_>=2))
Read [invariant] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-05 with value :(((cAMP__1_25_>=2)&&((cAMP__19_8_<=cAMP__9_15_)||(cAMP__28_23_>=3)))||(cAMP__1_5_<=cAMP__9_25_))
Read [reachable] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-06 with value :((cAMP__12_30_>=1)&&((!(cAMP__11_9_<=cAMP__11_7_))||((cAMP__10_15_<=cAMP__19_30_)||(cAMP__15_16_>=2))))
Read [invariant] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-07 with value :((((cAMP__16_3_>=2)||(cAMP__18_16_>=2))||((cAMP__20_7_<=cAMP__10_14_)||(cAMP__21_7_<=cAMP__29_30_)))||(cAMP__14_4_>=3))
Read [invariant] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-08 with value :((cAMP__12_7_>=1)||((cAMP__21_1_<=cAMP__3_17_)&&((cAMP__23_30_>=2)||(cAMP__25_8_<=cAMP__4_25_))))
Read [reachable] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-09 with value :(!(((cAMP__22_23_<=cAMP__23_7_)&&(cAMP__10_6_<=cAMP__11_24_))||((cAMP__23_5_>=3)&&(cAMP__11_14_<=cAMP__8_11_))))
Read [invariant] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-10 with value :(!((!(cAMP__23_7_<=cAMP__21_16_))&&(cAMP__19_1_>=3)))
Read [invariant] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-11 with value :((cAMP__19_21_>=1)||(((cAMP__15_21_>=2)||(cAMP__1_13_<=cAMP__24_5_))||((cAMP__15_25_>=2)&&(cAMP__12_22_>=2))))
Read [invariant] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-12 with value :(cAMP__19_25_<=cAMP__27_9_)
Read [invariant] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-13 with value :((cAMP__15_5_<=cAMP__19_14_)&&(((cAMP__1_9_<=cAMP__3_16_)&&(cAMP__20_9_<=cAMP__13_17_))||(!(cAMP__14_26_>=1))))
Read [invariant] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-14 with value :(((cAMP__22_6_<=cAMP__25_27_)&&(!(cAMP__17_11_>=1)))||(((cAMP__29_6_<=cAMP__9_25_)&&(cAMP__12_6_<=cAMP__23_12_))&&(cAMP__14_5_<=cAMP__28_14_)))
Read [reachable] property : Diffusion2D-PT-D30N100-ReachabilityCardinality-15 with value :(cAMP__10_22_>=2)
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
Compilation finished in 64924 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 142 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality00==true], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality00==true], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality01==true], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality01==true], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality02==true], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality02==true], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality03==true], workingDir=/home/mcc/execution]
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
Diffusion2D\_PT\_D30N100\_flat\_flat,5.74655e+139,768.833,4691820,2,90801,5,2.65129e+07,6,0,10447,2.61272e+07,0
Total reachable state count : 5.746546073367461673705883667931427656004e+139

Verifying 16 reachability properties.
Reachability property Diffusion2D-PT-D30N100-ReachabilityCardinality-00 is true.
FORMULA Diffusion2D-PT-D30N100-ReachabilityCardinality-00 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING USE_NUPN

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
Diffusion2D-PT-D30N100-ReachabilityCardinality-00,4.62667e+109,769.811,4692064,2,43867,6,2.65129e+07,7,0,10564,2.61272e+07,0
Invariant property Diffusion2D-PT-D30N100-ReachabilityCardinality-01 does not hold.
FORMULA Diffusion2D-PT-D30N100-ReachabilityCardinality-01 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING USE_NUPN

WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality03==true], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality04==true], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality04==true], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality05==true], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality05==true], workingDir=/home/mcc/execution]
255

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 26, 2018 12:54:58 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityCardinality, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 26, 2018 12:54:58 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 26, 2018 12:54:58 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 286 ms
May 26, 2018 12:54:58 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 900 places.
May 26, 2018 12:54:59 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 6844 transitions.
May 26, 2018 12:54:59 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 740 ms
May 26, 2018 12:55:00 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 487 ms
May 26, 2018 12:55:00 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 509 ms
May 26, 2018 12:55:00 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityCardinality.pnml.gal : 75 ms
May 26, 2018 12:55:00 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSTools
INFO: Time to serialize properties into /home/mcc/execution/ReachabilityCardinality.prop : 1 ms
May 26, 2018 12:55:01 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 6844 transitions.
May 26, 2018 12:55:01 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Too many transitions (6844) to apply POR reductions. Disabling POR matrices.
May 26, 2018 12:55:01 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 1343ms conformant to PINS in folder :/home/mcc/execution
pins2lts-mc, 0.000: Registering PINS so language module
pins2lts-mc, 0.000, ** error **: out of memory trying to get 4294967296
java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -i, Diffusion2DPTD30N100ReachabilityCardinality05==true], workingDir=/home/mcc/execution]
255
at fr.lip6.move.gal.application.LTSminRunner.checkProperty(LTSminRunner.java:167)
at fr.lip6.move.gal.application.LTSminRunner.access$9(LTSminRunner.java:122)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:91)
at java.lang.Thread.run(Thread.java:748)
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Diffusion2D-PT-D30N100"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Diffusion2D-PT-D30N100.tgz
mv Diffusion2D-PT-D30N100 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is Diffusion2D-PT-D30N100, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r081-blw3-152649948500250"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;