Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
/home/mcc/execution
total 39M
-rw-r--r-- 1 mcc users 1.1M May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 3.0M May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 586K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 2.0M May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.3K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 339K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 922K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 342K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 1.2M May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 754K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 2.1M May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 114 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 352 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 846K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 2.9M May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 108K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 238K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 3 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 23M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is DatabaseWithMutex-PT-40, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r081-blw3-152649948200064
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1527244552031

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph7975026641955118712.txt, -o, /tmp/graph7975026641955118712.bin, -w, /tmp/graph7975026641955118712.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph7975026641955118712.bin, -l, -1, -v, -w, /tmp/graph7975026641955118712.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats
built 4880 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 160 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 160 ordering constraints for composite.
built 1640 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.
built 160 ordering constraints for composite.

BK_STOP 1527245142564

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution StateSpace -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StateSpace -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 25, 2018 10:35:53 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 25, 2018 10:35:53 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 25, 2018 10:35:54 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 891 ms
May 25, 2018 10:35:54 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 12920 places.
May 25, 2018 10:35:55 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 12800 transitions.
May 25, 2018 10:35:55 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 25, 2018 10:35:59 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 4086 ms
May 25, 2018 10:36:02 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 2986 ms
Begin: Fri May 25 10:36:06 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Fri May 25 10:36:06 2018
network size: 12920 nodes, 288000 links, 25600 weight
quality increased from -0.000470102 to 0.564462
end computation: Fri May 25 10:36:06 2018
level 1:
start computation: Fri May 25 10:36:06 2018
network size: 3320 nodes, 144120 links, 25600 weight
quality increased from 0.564462 to 0.742432
end computation: Fri May 25 10:36:06 2018
level 2:
start computation: Fri May 25 10:36:06 2018
network size: 120 nodes, 9640 links, 25600 weight
quality increased from 0.742432 to 0.742432
end computation: Fri May 25 10:36:06 2018
End: Fri May 25 10:36:06 2018
Total duration: 0 sec
0.742432
May 25, 2018 10:36:06 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 25, 2018 10:36:09 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 2933 ms
May 25, 2018 10:36:11 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 25, 2018 10:37:06 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 123160 redundant transitions.
May 25, 2018 10:37:06 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 365 ms
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DatabaseWithMutex-PT-40"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/DatabaseWithMutex-PT-40.tgz
mv DatabaseWithMutex-PT-40 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is DatabaseWithMutex-PT-40, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r081-blw3-152649948200064"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;