Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
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/home/mcc/execution
total 304K
-rw-r--r-- 1 mcc users 3.2K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.6K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.0K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.0K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 22K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 117 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 355 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.1K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 14 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 135K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool mcc4mcc-full
Input is DNAwalker-PT-13ringRLLarge, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r070-smll-152649743100312
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-00
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-01
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-02
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-03
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-04
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-05
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-06
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-07
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-08
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-09
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-10
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-11
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-12
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-13
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-14
FORMULA_NAME DNAwalker-PT-13ringRLLarge-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1526766073639


BK_STOP 1526766301024

--------------------
content from stderr:

Prefix is 65b80f64.
Reading known information in /usr/share/mcc4mcc/65b80f64-known.json.
Reading learned information in /usr/share/mcc4mcc/65b80f64-learned.json.
Reading value translations in /usr/share/mcc4mcc/65b80f64-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using DNAwalker-PT-13ringRLLarge as instance name.
Using DNAwalker as model name.
Using algorithm or tool voting-classifier.
Model characteristics are: {'Examination': 'CTLFireability', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': False, 'Simple Free Choice': False, 'Extended Free Choice': False, 'State Machine': False, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': False, 'Source Place': None, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': None, 'Loop Free': False, 'Conservative': False, 'Sub-Conservative': True, 'Nested Units': False, 'Safe': False, 'Deadlock': True, 'Reversible': False, 'Quasi Live': None, 'Live': None}.
/usr/local/lib/python3.6/dist-packages/sklearn/preprocessing/label.py:151: DeprecationWarning: The truth value of an empty array is ambiguous. Returning False, but in future this will result in an error. Use `array.size > 0` to check that an array is not empty.
if diff:
Known tools are: [{'Time': 162938, 'Memory': 10242.83, 'Tool': 'marcie'}, {'Time': 165628, 'Memory': 10243.08, 'Tool': 'marcie'}, {'Time': 891342, 'Memory': 4253.44, 'Tool': 'itstools'}, {'Time': 923727, 'Memory': 4248.89, 'Tool': 'itstools'}, {'Time': 1609197, 'Memory': 15943.55, 'Tool': 'lola'}, {'Time': 1623188, 'Memory': 15945.55, 'Tool': 'lola'}].
Learned tools are: [{'Tool': 'lola'}].
Learned tool lola is 9.876130798217726x far from the best tool marcie.
CTLFireability lola DNAwalker-PT-13ringRLLarge...

Time: 3600 - MCC
----- Start make prepare stdout -----
----- Start make prepare stderr -----
===========================================================================================
DNAwalker-PT-13ringRLLarge: translating PT Petri net model.pnml into LoLA format
===========================================================================================
translating PT Petri net complete


checking for too many tokens
===========================================================================================
DNAwalker-PT-13ringRLLarge: translating PT formula CTLFireability into LoLA format
===========================================================================================
translating formula complete
touch formulae;
----- Start make result stderr -----
----- Start make result stdout -----
CTLFireability @ DNAwalker-PT-13ringRLLarge @ 3540 seconds
make: [verify] Error 134 (ignored)
----- Start make result stderr -----
Makefile:222: recipe for target 'verify' failed
----- Start make result stdout -----
lola: LoLA will run for 3540 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 345/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: finding significant places
lola: 33 places, 312 transitions, 33 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 197 transition conflict sets
lola: TASK
lola: reading formula from DNAwalker-PT-13ringRLLarge-CTLFireability.task
lola: A (F (NOT(NOT(E (F (FIREABLE(t2_1))))))) : E (((NOT FIREABLE(tb18) OR NOT FIREABLE(t18_15) OR (NOT FIREABLE(t12_1) AND FIREABLE(t20_19))) U (E (G (FIREABLE(t2_16))) OR (FIREABLE(t15_14) AND FIREABLE(t6_10))))) : (A (F ((A (G (FIREABLE(t3_7))) AND FIREABLE(t26_5)))) OR FIREABLE(t5_9)) : (NOT(E (F (FIREABLE(t8_11)))) OR A (F (A (X (FIREABLE(t15_17)))))) : A (F ((A (F (NOT FIREABLE(t4_1))) AND FIREABLE(t26_2)))) : A ((NOT FIREABLE(t24_3) U NOT(A (F (FIREABLE(t23_22)))))) : A (F ((FIREABLE(t23_27) AND (E (X (FIREABLE(t3_8))) AND E (X (FIREABLE(t4_7))))))) : A (X (A (F (NOT FIREABLE(t1_8))))) : (NOT(((NOT FIREABLE(t25_22) AND NOT FIREABLE(t15_10) AND FIREABLE(tb15)) OR A (F (NOT FIREABLE(t16_22))))) OR A (F ((((FIREABLE(t3_1) AND FIREABLE(t1_18)) OR FIREABLE(t7_5)) AND A (G (FIREABLE(t19_18))))))) : (E (X (E ((FIREABLE(t27_24) U FIREABLE(t26_1))))) OR FIREABLE(t25_23)) : (((NOT FIREABLE(t18_20) AND NOT FIREABLE(t2_1)) OR NOT FIREABLE(t26_1) OR NOT FIREABLE(t18_1) OR NOT FIREABLE(t4_16)) AND (E (F (A (F (FIREABLE(t23_19))))) AND A (F (E (X (FIREABLE(t13_17))))))) : A (F (FIREABLE(t27_2))) : E (G (E ((FIREABLE(t8_9) U NOT FIREABLE(t2_5))))) : E (X (E (G ((NOT FIREABLE(t20_19) AND NOT FIREABLE(t16_18)))))) : E ((FIREABLE(tb16) U ((FIREABLE(t20_23) AND FIREABLE(t2_26)) OR (FIREABLE(t14_12) AND FIREABLE(t2_22)) OR (FIREABLE(t14_15) AND FIREABLE(t18_17) AND FIREABLE(t25_4))))) : A ((NOT(A (G (FIREABLE(t23_24)))) U (FIREABLE(t4_25) AND NOT FIREABLE(t26_4))))
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (F (NOT(NOT(E (F (FIREABLE(t2_1)))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: A(TRUE U E(TRUE U FIREABLE(t2_1)))
lola: processed formula length: 34
lola: 8 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file DNAwalker-PT-13ringRLLarge-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 132 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 795331 markings, 3099475 edges, 159066 markings/sec, 0 secs
lola: 1575460 markings, 6339386 edges, 156026 markings/sec, 5 secs
lola: 2330324 markings, 9319988 edges, 150973 markings/sec, 10 secs
lola: 3026080 markings, 12173212 edges, 139151 markings/sec, 15 secs
lola: 3687449 markings, 15127619 edges, 132274 markings/sec, 20 secs
lola: 4345547 markings, 17649441 edges, 131620 markings/sec, 25 secs
lola: 4974390 markings, 20241444 edges, 125769 markings/sec, 30 secs
lola: 5546778 markings, 22788173 edges, 114478 markings/sec, 35 secs
lola: 6174887 markings, 25269353 edges, 125622 markings/sec, 40 secs
lola: 6710050 markings, 27627984 edges, 107033 markings/sec, 45 secs
lola: 7359908 markings, 30506614 edges, 129972 markings/sec, 50 secs
lola: 8026189 markings, 33126149 edges, 133256 markings/sec, 55 secs
lola: 8606975 markings, 35527434 edges, 116157 markings/sec, 60 secs
lola: 9203850 markings, 37906822 edges, 119375 markings/sec, 65 secs
lola: 9829074 markings, 40511156 edges, 125045 markings/sec, 70 secs
lola: 10374538 markings, 42716154 edges, 109093 markings/sec, 75 secs
lola: 10951959 markings, 45180214 edges, 115484 markings/sec, 80 secs
lola: 11473340 markings, 47604497 edges, 104276 markings/sec, 85 secs
lola: 12070440 markings, 49977652 edges, 119420 markings/sec, 90 secs
lola: 12607203 markings, 52260865 edges, 107353 markings/sec, 95 secs
lola: 13176559 markings, 54651606 edges, 113871 markings/sec, 100 secs
lola: 13730752 markings, 57176650 edges, 110839 markings/sec, 105 secs
lola: 14296870 markings, 59507306 edges, 113224 markings/sec, 110 secs
lola: 14807557 markings, 61866722 edges, 102137 markings/sec, 115 secs
lola: 15442321 markings, 64645321 edges, 126953 markings/sec, 120 secs
lola: 16167013 markings, 67945607 edges, 144938 markings/sec, 125 secs
lola: 16785622 markings, 70950117 edges, 123722 markings/sec, 130 secs
lola: 17356460 markings, 73698023 edges, 114168 markings/sec, 135 secs
lola: 17945759 markings, 76971291 edges, 117860 markings/sec, 140 secs
lola: 18464135 markings, 79876744 edges, 103675 markings/sec, 145 secs
lola: 18957632 markings, 82797594 edges, 98699 markings/sec, 150 secs
lola: 19431092 markings, 85426275 edges, 94692 markings/sec, 155 secs
lola: 19909392 markings, 88186951 edges, 95660 markings/sec, 160 secs
lola: 20351117 markings, 90782257 edges, 88345 markings/sec, 165 secs
lola: 20818109 markings, 93472197 edges, 93398 markings/sec, 170 secs
lola: 21253969 markings, 95928669 edges, 87172 markings/sec, 175 secs
lola: 21705995 markings, 98516420 edges, 90405 markings/sec, 180 secs
lola: 22128868 markings, 100994288 edges, 84575 markings/sec, 185 secs
lola: 22564736 markings, 103551225 edges, 87174 markings/sec, 190 secs
lola: 22989617 markings, 106021835 edges, 84976 markings/sec, 195 secs
lola: 23421936 markings, 108603183 edges, 86464 markings/sec, 200 secs
lola: 23847651 markings, 111214337 edges, 85143 markings/sec, 205 secs
lola: 24382982 markings, 114547636 edges, 107066 markings/sec, 210 secs
lola: 24903827 markings, 117763845 edges, 104169 markings/sec, 215 secs
lola: local time limit reached - aborting
lola: Child process aborted or communication problem between parent and child process
terminate called after throwing an instance of 'std::runtime_error'
what(): parse error at position 0: unexpected character, last read: '`'
Aborted (core dumped)
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-0 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-1 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-2 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-3 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-4 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-5 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-6 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-7 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-8 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-9 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-10 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-11 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-12 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-13 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-14 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA DNAwalker-PT-13ringRLLarge-CTLFireability-15 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
----- Kill lola and sara stderr -----
----- Kill lola and sara stdout -----
----- Finished stderr -----
----- Finished stdout -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DNAwalker-PT-13ringRLLarge"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="mcc4mcc-full"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/DNAwalker-PT-13ringRLLarge.tgz
mv DNAwalker-PT-13ringRLLarge execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool mcc4mcc-full"
echo " Input is DNAwalker-PT-13ringRLLarge, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r070-smll-152649743100312"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;