Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................................................................................
/home/mcc/execution
total 212K
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.7K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:49 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K May 15 18:49 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 9.8K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.6K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.7K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 23K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 109 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 347 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 13K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:49 equiv_col
-rw-r--r-- 1 mcc users 3 May 15 18:49 instance
-rw-r--r-- 1 mcc users 6 May 15 18:49 iscolored
-rw-r--r-- 1 mcc users 33K May 15 18:49 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool mcc4mcc-full
Input is Angiogenesis-PT-01, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r022-qhx1-152646247100005
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-00
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-01
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-02
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-03
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-04
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-05
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-06
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-07
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-08
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-09
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-10
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-11
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-12
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-13
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-14
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-15

=== Now, execution of the tool begins

BK_START 1526884326716


BK_STOP 1526884378555

--------------------
content from stderr:

Prefix is 65b80f64.
Reading known information in /usr/share/mcc4mcc/65b80f64-known.json.
Reading learned information in /usr/share/mcc4mcc/65b80f64-learned.json.
Reading value translations in /usr/share/mcc4mcc/65b80f64-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using Angiogenesis-PT-01 as instance name.
Using Angiogenesis as model name.
Using algorithm or tool bmdt.
Model characteristics are: {'Examination': 'ReachabilityCardinality', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': True, 'Simple Free Choice': False, 'Extended Free Choice': False, 'State Machine': False, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': False, 'Source Place': False, 'Sink Place': True, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': True, 'Conservative': False, 'Sub-Conservative': False, 'Nested Units': False, 'Safe': None, 'Deadlock': True, 'Reversible': False, 'Quasi Live': False, 'Live': False}.
Known tools are: [{'Time': 60, 'Memory': 102.34, 'Tool': 'gspn'}, {'Time': 123, 'Memory': 112.86, 'Tool': 'lola'}, {'Time': 282, 'Memory': 111.01, 'Tool': 'lola'}, {'Time': 1593, 'Memory': 165.14, 'Tool': 'gspn'}, {'Time': 1958, 'Memory': 1759.26, 'Tool': 'marcie'}, {'Time': 2256, 'Memory': 2205.34, 'Tool': 'marcie'}, {'Time': 2655, 'Memory': 236.4, 'Tool': 'itstools'}, {'Time': 2756, 'Memory': 228.46, 'Tool': 'itstools'}].
Learned tools are: [{'Tool': 'lola'}].
Learned tool lola is 2.05x far from the best tool gspn.
ReachabilityCardinality lola Angiogenesis-PT-01...

Time: 3600 - MCC
----- Start make prepare stdout -----
----- Start make prepare stderr -----
===========================================================================================
Angiogenesis-PT-01: translating PT Petri net model.pnml into LoLA format
===========================================================================================
translating PT Petri net complete


checking for too many tokens
===========================================================================================
Angiogenesis-PT-01: translating PT formula ReachabilityCardinality into LoLA format
===========================================================================================
translating formula complete
touch formulae;
----- Start make result stdout -----
----- Start make result stderr -----
ReachabilityCardinality @ Angiogenesis-PT-01 @ 3538 seconds
----- Start make result stdout -----
----- Start make result stderr -----
lola: LoLA will run for 3538 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 103/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: finding significant places
lola: 39 places, 64 transitions, 31 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 54 transition conflict sets
lola: TASK
lola: reading formula from Angiogenesis-PT-01-ReachabilityCardinality.task
lola: E (F (((KdStarG <= KdStarGStarP3kP3) AND (1 <= KdStarGStarP3kStarP3) AND ((AktStar <= DAG) OR (Pten <= KdStarGStarP3)) AND (1 <= KdStarGStarP3kStarP2)))) : A (G ((((AktStar <= Pten) AND (KdStarGStarP3kStarP2 <= Enz)) OR (2 <= Enz) OR ((KdStarGStarPgStarP3P2 <= 2) AND (Pg + 1 <= KdStarGP3))))) : A (G ((((GStarPgP3 <= AktStar) OR (KdStarGStarP3kP3 <= Enz)) AND ((1 <= KdStarPgStarP2) OR (3 <= PtP3)) AND (2 <= KdStar) AND (3 <= KdStarGStarP3kStarP3P2) AND (GStarP3 + 1 <= GStarP3kP3)))) : E (F (((DAG <= KdStarGStarPgStarP3) OR ((KdStarGStarP3kStarP3 + 1 <= Pten) AND (KdStarGStarPgP3 <= 1))))) : A (G (((Pg <= 2) AND ((KdStarGStar + 1 <= DAGE) OR (KdStarGStarP3kStar + 1 <= Gab1))))) : E (F ((((KdStarGStarP3 <= DAG) OR (3 <= DAG) OR (KdStarGStarP3kStarP3 <= 1)) AND (2 <= KdStarGStarPg)))) : E (F ((GStarP3 <= Enz))) : A (G (((KdStarGStarPg <= KdStarGStarP3kStarP3P2) OR (3 <= PtP2) OR ((2 <= Pten) AND (2 <= KdStarGStarP3k)) OR (GStarPgP3 <= KdStarGStarP3)))) : A (G (((((KdStarGStarP3kStar <= KdStarG) AND (KdStarGStarP3kStarP3P2 <= KdStarGStarPgP3)) OR ((3 <= P3k) AND (PtP3 <= KdStarPgStarP2))) AND (Gab1 <= KdStarGStarP3kStarP3)))) : E (F (((1 <= P3k) AND (KdStarGStarPgStarP3 <= KdStarGStarP3kStar) AND (KdStarGStarP3kP3 <= 0) AND (((PtP3P2 <= KdStarGStarP3) AND (KdStarGStarPgStar <= Pg)) OR (3 <= Akt))))) : E (F (((KdStarGStarP3 + 1 <= KdStarGStarP3kStarP3P2) OR (KdStar <= 2) OR ((1 <= KdStarGStarP3kP3) AND (KdStarPgStar + 1 <= KdStarGStarP3k))))) : A (G ((((Pip2 + 1 <= KdStarGStarP3) OR (GStarP3 + 1 <= Pip3)) AND ((PtP3 + 1 <= GStarPgP3) OR (KdStarPgStarP2 <= 2))))) : A (G (((KdStarG <= 1) AND ((P3k <= KdStarGStarPgStar) OR (PtP3 <= KdStarGStarP3kP3)) AND (KdStarGStarPg <= 0)))) : A (G (((1 <= Pten) AND (KdStarGStar + 1 <= KdStarGStarP3kStar)))) : E (F (((1 <= Pten) AND (3 <= KdStarGStarP3kStarP3)))) : E (F ((3 <= KdStarGStarP3k)))
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((KdStarG <= KdStarGStarP3kP3) AND (1 <= KdStarGStarP3kStarP3) AND ((AktStar <= DAG) OR (Pten <= KdStarGStarP3)) AND (1 <= KdStarGStarP3kStarP2))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 8 literals and 2 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: 80 markings, 167 edges
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality.sara
lola: ========================================
lola: subprocess 1 will run for 235 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((((AktStar <= Pten) AND (KdStarGStarP3kStarP2 <= Enz)) OR (2 <= Enz) OR ((KdStarGStarPgStarP3P2 <= 2) AND (Pg + 1 <= KdStarGP3)))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 12 literals and 4 conjunctive subformulas
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 23 markings, 35 edges
lola: ========================================
lola: state equation: calling and running sara
lola: subprocess 2 will run for 252 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((((GStarPgP3 <= AktStar) OR (KdStarGStarP3kP3 <= Enz)) AND ((1 <= KdStarPgStarP2) OR (3 <= PtP3)) AND (2 <= KdStar) AND (3 <= KdStarGStarP3kStarP3P2) AND (GStarP3 + 1 <= GStarP3kP3))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 0 markings, 0 edges
lola: ========================================
lola: subprocess 3 will run for 272 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((DAG <= KdStarGStarPgStarP3) OR ((KdStarGStarP3kStarP3 + 1 <= Pten) AND (KdStarGStarPgP3 <= 1)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 3 literals and 2 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 0 markings, 0 edges
sara: try reading problem file Angiogenesis-PT-01-ReachabilityCardinality.sara.
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-3.sara
lola: ========================================
lola: subprocess 4 will run for 294 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((Pg <= 2) AND ((KdStarGStar + 1 <= DAGE) OR (KdStarGStarP3kStar + 1 <= Gab1)))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 3 literals and 2 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 2 markings, 1 edges
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-4.sara
lola: ========================================
lola: subprocess 5 will run for 321 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((((KdStarGStarP3 <= DAG) OR (3 <= DAG) OR (KdStarGStarP3kStarP3 <= 1)) AND (2 <= KdStarGStarPg))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 6 literals and 3 conjunctive subformulas
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-5.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: 101 markings, 248 edges
lola: ========================================
lola: subprocess 6 will run for 353 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((GStarP3 <= Enz)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 0 markings, 0 edges
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-6.sara
lola: ========================================
lola: subprocess 7 will run for 393 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((KdStarGStarPg <= KdStarGStarP3kStarP3P2) OR (3 <= PtP2) OR ((2 <= Pten) AND (2 <= KdStarGStarP3k)) OR (GStarPgP3 <= KdStarGStarP3))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 8 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-7.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is invariant.
lola: 83 markings, 171 edges
lola: ========================================
lola: subprocess 8 will run for 442 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((((KdStarGStarP3kStar <= KdStarG) AND (KdStarGStarP3kStarP3P2 <= KdStarGStarPgP3)) OR ((3 <= P3k) AND (PtP3 <= KdStarPgStarP2))) AND (Gab1 <= KdStarGStarP3kStarP3))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 9 literals and 5 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 0 markings, 0 edges
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-8.sara
lola: ========================================
lola: subprocess 9 will run for 505 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((1 <= P3k) AND (KdStarGStarPgStarP3 <= KdStarGStarP3kStar) AND (KdStarGStarP3kP3 <= 0) AND (((PtP3P2 <= KdStarGStarP3) AND (KdStarGStarPgStar <= Pg)) OR (3 <= Akt)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 9 literals and 2 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 0 markings, 0 edges
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-9.sara
lola: ========================================
lola: subprocess 10 will run for 589 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((KdStarGStarP3 + 1 <= KdStarGStarP3kStarP3P2) OR (KdStar <= 2) OR ((1 <= KdStarGStarP3kP3) AND (KdStarPgStar + 1 <= KdStarGStarP3k)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 4 literals and 3 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 0 markings, 0 edges
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-10.sara
lola: ========================================
lola: subprocess 11 will run for 707 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((((Pip2 + 1 <= KdStarGStarP3) OR (GStarP3 + 1 <= Pip3)) AND ((PtP3 + 1 <= GStarPgP3) OR (KdStarPgStarP2 <= 2)))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 4 literals and 2 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 0 markings, 0 edges
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-11.sara
lola: ========================================
lola: subprocess 12 will run for 884 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((KdStarG <= 1) AND ((P3k <= KdStarGStarPgStar) OR (PtP3 <= KdStarGStarP3kP3)) AND (KdStarGStarPg <= 0))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 4 literals and 3 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 4 markings, 4 edges
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-12.sara
lola: ========================================
lola: subprocess 13 will run for 1179 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((1 <= Pten) AND (KdStarGStar + 1 <= KdStarGStarP3kStar))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 2 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 0 markings, 0 edges
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-13.sara
lola: ========================================
lola: subprocess 14 will run for 1769 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((1 <= Pten) AND (3 <= KdStarGStarP3kStarP3))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-14.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: 83 markings, 177 edges
lola: ========================================
lola: subprocess 15 will run for 3538 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((3 <= KdStarGStarP3k)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 124 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to Angiogenesis-PT-01-ReachabilityCardinality-15.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: 101 markings, 248 edges
lola: ========================================
lola: RESULT
lola:
SUMMARY: no no no yes no no yes yes no yes yes no no no no no

FORMULA Angiogenesis-PT-01-ReachabilityCardinality-0 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-1 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-2 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-3 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-4 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-5 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-6 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-7 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-8 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-9 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-10 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-11 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-12 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-13 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-14 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-15 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
----- Kill lola and sara stdout -----
----- Kill lola and sara stderr -----
----- Finished stderr -----
----- Finished stdout -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-01"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="mcc4mcc-full"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-01.tgz
mv Angiogenesis-PT-01 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool mcc4mcc-full"
echo " Input is Angiogenesis-PT-01, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r022-qhx1-152646247100005"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;