Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..........................
/home/mcc/execution
total 212K
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.7K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:49 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K May 15 18:49 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 9.8K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.6K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.7K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 23K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 109 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 347 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 13K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:49 equiv_col
-rw-r--r-- 1 mcc users 3 May 15 18:49 instance
-rw-r--r-- 1 mcc users 6 May 15 18:49 iscolored
-rw-r--r-- 1 mcc users 33K May 15 18:49 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstools
Input is Angiogenesis-PT-01, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r020-qhx1-152646244300004
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-00
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-01
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-02
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-03
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-04
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-05
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-06
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-07
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-08
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-09
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-10
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-11
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-12
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-13
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-14
FORMULA_NAME Angiogenesis-PT-01-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1526835890123

Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805151631/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805151631/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,110,0.042279,4640,2,284,5,1209,6,0,220,974,0


Converting to forward existential form...Done !
original formula: ((AX(!((PtP3P2>=1))) + EX((KdStarPgStarP2>=1))) * AG((GStarP3kP3>=1)))
=> equivalent forward existential formula: ([(EY((Init * !(EX((KdStarPgStarP2>=1))))) * (PtP3P2>=1))] = FALSE * [(FwdU(Init,TRUE) * !((GStarP3kP3>=1)))] = FALSE)
(forward)formula 0,0,0.04523,5332,1,0,8,1209,9,2,224,974,1
FORMULA Angiogenesis-PT-01-CTLFireability-00 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: AX((EF(((KdStarGStarPgP3>=1)||((DAG>=1)&&(Enz>=1)))) + ((((KdStarGStarP3kP3>=1)||(KdStarGStarPgP3>=1))&&((KdStarGStarPgStarP2>=1)&&(AktP3>=1)))&&((Gab1>=1)&&(KdStar>=1)))))
=> equivalent forward existential formula: [((EY(Init) * !(((((KdStarGStarP3kP3>=1)||(KdStarGStarPgP3>=1))&&((KdStarGStarPgStarP2>=1)&&(AktP3>=1)))&&((Gab1>=1)&&(KdStar>=1))))) * !(E(TRUE U ((KdStarGStarPgP3>=1)||((DAG>=1)&&(Enz>=1))))))] = FALSE
Reverse transition relation is NOT exact ! Due to transitions k2, k55, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :14/48/2/64
(forward)formula 1,1,0.103179,7180,1,0,61,9870,139,40,1401,4300,130
FORMULA Angiogenesis-PT-01-CTLFireability-01 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: (AG((EG((KdStarGStarPgStarP2>=1)) + AF((KdStarPgStarP2>=1)))) + !(A((((Gab1>=1)&&(Pip3>=1))||(KdStarGStarP3kStarP3P2>=1)) U !((KdStarPg>=1)))))
=> equivalent forward existential formula: [FwdG((FwdU((Init * !(!(!((E(!(!((KdStarPg>=1))) U (!((((Gab1>=1)&&(Pip3>=1))||(KdStarGStarP3kStarP3P2>=1))) * !(!((KdStarPg>=1))))) + EG(!(!((KdStarPg>=1))))))))),TRUE) * !(EG((KdStarGStarPgStarP2>=1)))),!((KdStarPgStarP2>=1)))] = FALSE
Hit Full ! (commute/partial/dont) 61/0/3
(forward)formula 2,0,0.118986,7444,1,0,66,10370,165,48,1496,5339,156
FORMULA Angiogenesis-PT-01-CTLFireability-02 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: ((KdStarGStarPgStar>=1)&&(Pip2>=1))
=> equivalent forward existential formula: [(Init * ((KdStarGStarPgStar>=1)&&(Pip2>=1)))] != FALSE
(forward)formula 3,0,0.120208,7444,1,0,66,10370,166,48,1496,5339,157
FORMULA Angiogenesis-PT-01-CTLFireability-03 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: (((KdStarGStarPgStarP3P2>=1) + EG(EF((KdStarGStarPgStarP2>=1)))) * E(EF((KdStarGP3>=1)) U ((((GStarPgP3>=1)&&(KdStar>=1))||(KdStarGStarPgP3>=1))&&(AktP3>=1))))
=> equivalent forward existential formula: [(FwdU((Init * ((KdStarGStarPgStarP3P2>=1) + EG(E(TRUE U (KdStarGStarPgStarP2>=1))))),E(TRUE U (KdStarGP3>=1))) * ((((GStarPgP3>=1)&&(KdStar>=1))||(KdStarGStarPgP3>=1))&&(AktP3>=1)))] != FALSE
(forward)formula 4,0,0.122022,7444,1,0,66,10373,167,48,1498,5339,157
FORMULA Angiogenesis-PT-01-CTLFireability-04 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: EF((E(((Gab1>=1)&&(KdStar>=1)) U (GP3>=1)) + AF(((KdStarGStarPgStarP2>=1)||((GStarPgP3>=1)&&(KdStar>=1))))))
=> equivalent forward existential formula: ([(FwdU(FwdU(Init,TRUE),((Gab1>=1)&&(KdStar>=1))) * (GP3>=1))] != FALSE + [(FwdU(Init,TRUE) * !(EG(!(((KdStarGStarPgStarP2>=1)||((GStarPgP3>=1)&&(KdStar>=1)))))))] != FALSE)
(forward)formula 5,1,0.164455,8500,1,0,138,18973,174,91,1502,10663,278
FORMULA Angiogenesis-PT-01-CTLFireability-05 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: (KdStarGStarP3>=1)
=> equivalent forward existential formula: [(Init * (KdStarGStarP3>=1))] != FALSE
(forward)formula 6,0,0.165951,8764,1,0,138,18973,175,91,1502,10663,279
FORMULA Angiogenesis-PT-01-CTLFireability-06 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: !(A(((!(GStarPgP3>=1))||(KdStarGStarP3>=1)) U ((!((GStarP3>=1)&&(KdStar>=1)))||(PtP2>=1))))
=> equivalent forward existential formula: ([(FwdU(Init,!(((!((GStarP3>=1)&&(KdStar>=1)))||(PtP2>=1)))) * (!(((!(GStarPgP3>=1))||(KdStarGStarP3>=1))) * !(((!((GStarP3>=1)&&(KdStar>=1)))||(PtP2>=1)))))] != FALSE + [FwdG(Init,!(((!((GStarP3>=1)&&(KdStar>=1)))||(PtP2>=1))))] != FALSE)
(forward)formula 7,0,0.169144,8764,1,0,138,19033,186,92,1517,10679,280
FORMULA Angiogenesis-PT-01-CTLFireability-07 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: ((AX(((DAG>=1)&&(Enz>=1))) * (((AktP3>=1)&&(KdStarG>=1))&&((KdStarGStarPg>=1)||(KdStarGStarP3kP3>=1)))) * AX(A((PtP2>=1) U ((GStarP3>=1)&&(Pg>=1)))))
=> equivalent forward existential formula: (([(EY(Init) * !(((DAG>=1)&&(Enz>=1))))] = FALSE * [(Init * !((((AktP3>=1)&&(KdStarG>=1))&&((KdStarGStarPg>=1)||(KdStarGStarP3kP3>=1)))))] = FALSE) * ([(FwdU(EY(Init),!(((GStarP3>=1)&&(Pg>=1)))) * (!((PtP2>=1)) * !(((GStarP3>=1)&&(Pg>=1)))))] = FALSE * [FwdG(EY(Init),!(((GStarP3>=1)&&(Pg>=1))))] = FALSE))
Hit Full ! (commute/partial/dont) 52/0/12
(forward)formula 8,0,0.175633,8764,1,0,139,19371,194,95,1541,11311,284
FORMULA Angiogenesis-PT-01-CTLFireability-08 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: (((!(EF((DAGE>=1))) * E((KdStarPg>=1) U (KdStarGStarP3>=1))) + !(E(((Gab1>=1)&&(KdStar>=1)) U ((GStarP3>=1)&&(Pg>=1))))) * (KdStarGStarPg>=1))
=> equivalent forward existential formula: ([(FwdU((Init * !((!(E(TRUE U (DAGE>=1))) * E((KdStarPg>=1) U (KdStarGStarP3>=1))))),((Gab1>=1)&&(KdStar>=1))) * ((GStarP3>=1)&&(Pg>=1)))] = FALSE * [(Init * !((KdStarGStarPg>=1)))] = FALSE)
(forward)formula 9,0,0.176773,8764,1,0,140,19375,196,95,1542,11313,285
FORMULA Angiogenesis-PT-01-CTLFireability-09 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: AG((PtP3P2>=1))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !((PtP3P2>=1)))] = FALSE
(forward)formula 10,0,0.178085,8764,1,0,141,19376,198,95,1544,11314,286
FORMULA Angiogenesis-PT-01-CTLFireability-10 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: ((GStarPgP3>=1)&&(KdStarPgStarP2>=1))
=> equivalent forward existential formula: [(Init * ((GStarPgP3>=1)&&(KdStarPgStarP2>=1)))] != FALSE
(forward)formula 11,0,0.179105,8764,1,0,141,19376,199,95,1545,11314,286
FORMULA Angiogenesis-PT-01-CTLFireability-11 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: ((((PtP3>=1)||(!((KdStarGStarP3kStarP3P2>=1)&&(((GStarPgP3>=1)&&(KdStar>=1))&&(KdStarGStarP3kStarP2>=1)))))&&((((!((Pip3>=1)&&(Pten>=1)))&&((KdStarGStarP3kP3>=1)||((PtP2>=1)&&(Pip3>=1))))||(((KdStarGStarP3k>=1)&&(KdStarGStarP3kStarP2>=1))||(KdStarGStarP3>=1)))&&(!((KdStarGStar>=1)&&(Pg>=1))))) + ((GStarP3kP3>=1) * AF(((!(KdStarGStarP3kP3>=1))||(KdStarGStarP3kStarP2>=1)))))
=> equivalent forward existential formula: ([((Init * !((((PtP3>=1)||(!((KdStarGStarP3kStarP3P2>=1)&&(((GStarPgP3>=1)&&(KdStar>=1))&&(KdStarGStarP3kStarP2>=1)))))&&((((!((Pip3>=1)&&(Pten>=1)))&&((KdStarGStarP3kP3>=1)||((PtP2>=1)&&(Pip3>=1))))||(((KdStarGStarP3k>=1)&&(KdStarGStarP3kStarP2>=1))||(KdStarGStarP3>=1)))&&(!((KdStarGStar>=1)&&(Pg>=1))))))) * !((GStarP3kP3>=1)))] = FALSE * [FwdG((Init * !((((PtP3>=1)||(!((KdStarGStarP3kStarP3P2>=1)&&(((GStarPgP3>=1)&&(KdStar>=1))&&(KdStarGStarP3kStarP2>=1)))))&&((((!((Pip3>=1)&&(Pten>=1)))&&((KdStarGStarP3kP3>=1)||((PtP2>=1)&&(Pip3>=1))))||(((KdStarGStarP3k>=1)&&(KdStarGStarP3kStarP2>=1))||(KdStarGStarP3>=1)))&&(!((KdStarGStar>=1)&&(Pg>=1))))))),!(((!(KdStarGStarP3kP3>=1))||(KdStarGStarP3kStarP2>=1))))] = FALSE)
(forward)formula 12,0,0.184498,9028,1,0,141,19386,208,97,1574,11343,288
FORMULA Angiogenesis-PT-01-CTLFireability-12 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: !(((A((KdStarGStarP3kP3>=1) U (KdStarGStarP3>=1)) * !(((!((Gab1>=1)&&(Pip3>=1)))&&(!(KdStarGStarP3kStarP2>=1))))) * E(((PtP3P2>=1)||(KdStarGStarPgStarP3P2>=1)) U (KdStarGStarP3kStarP2>=1))))
=> equivalent forward existential formula: ((([(FwdU(Init,!((KdStarGStarP3>=1))) * (!((KdStarGStarP3kP3>=1)) * !((KdStarGStarP3>=1))))] != FALSE + [FwdG(Init,!((KdStarGStarP3>=1)))] != FALSE) + [(Init * ((!((Gab1>=1)&&(Pip3>=1)))&&(!(KdStarGStarP3kStarP2>=1))))] != FALSE) + [(Init * !(E(((PtP3P2>=1)||(KdStarGStarPgStarP3P2>=1)) U (KdStarGStarP3kStarP2>=1))))] != FALSE)
Hit Full ! (commute/partial/dont) 55/0/9
(forward)formula 13,1,0.190618,9028,1,0,147,19517,219,100,1610,11637,293
FORMULA Angiogenesis-PT-01-CTLFireability-13 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************

original formula: AF(((KdStarGStarPgP3>=1)&&((((PtP3>=1)||(DAGE>=1))||(KdStarGStarPgStarP2>=1))&&((PtP2>=1)||(!((GStarP3>=1)&&(Pg>=1)))))))
=> equivalent forward existential formula: [FwdG(Init,!(((KdStarGStarPgP3>=1)&&((((PtP3>=1)||(DAGE>=1))||(KdStarGStarPgStarP2>=1))&&((PtP2>=1)||(!((GStarP3>=1)&&(Pg>=1))))))))] = FALSE
(forward)formula 14,0,0.192899,9028,1,0,147,19561,221,103,1620,11732,295
FORMULA Angiogenesis-PT-01-CTLFireability-14 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: ((((AF((PtP3>=1)) + ((((KdStarGStarPgStar>=1)&&(Pip2>=1))||(KdStarG>=1))&&((KdStarGStarP3kStar>=1)&&(Pip2>=1)))) * E(((KdStarGStar>=1)&&(P3k>=1)) U (PtP2>=1))) + ((!((((KdStarGStar>=1)&&(P3k>=1))&&((KdStarGStar>=1)&&(Pip3>=1)))&&((KdStarGStarPgP3>=1)||((GStarPgP3>=1)&&(KdStar>=1)))))||((KdStarGStarP3kStar>=1)&&(Pip2>=1)))) + (KdStarPgStarP2>=1))
=> equivalent forward existential formula: ([FwdG((((Init * !((KdStarPgStarP2>=1))) * !(((!((((KdStarGStar>=1)&&(P3k>=1))&&((KdStarGStar>=1)&&(Pip3>=1)))&&((KdStarGStarPgP3>=1)||((GStarPgP3>=1)&&(KdStar>=1)))))||((KdStarGStarP3kStar>=1)&&(Pip2>=1))))) * !(((((KdStarGStarPgStar>=1)&&(Pip2>=1))||(KdStarG>=1))&&((KdStarGStarP3kStar>=1)&&(Pip2>=1))))),!((PtP3>=1)))] = FALSE * [(((Init * !((KdStarPgStarP2>=1))) * !(((!((((KdStarGStar>=1)&&(P3k>=1))&&((KdStarGStar>=1)&&(Pip3>=1)))&&((KdStarGStarPgP3>=1)||((GStarPgP3>=1)&&(KdStar>=1)))))||((KdStarGStarP3kStar>=1)&&(Pip2>=1))))) * !(E(((KdStarGStar>=1)&&(P3k>=1)) U (PtP2>=1))))] = FALSE)
(forward)formula 15,1,0.214423,9820,1,0,174,22504,237,119,1639,13517,331
FORMULA Angiogenesis-PT-01-CTLFireability-15 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is TRUE !

***************************************


BK_STOP 1526835909502

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 20, 2018 5:05:06 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -smt]
May 20, 2018 5:05:07 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 20, 2018 5:05:07 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 62 ms
May 20, 2018 5:05:07 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 39 places.
May 20, 2018 5:05:07 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 64 transitions.
May 20, 2018 5:05:07 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 13 ms
May 20, 2018 5:05:07 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 83 ms
May 20, 2018 5:05:07 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 4 ms
May 20, 2018 5:05:07 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 4 ms

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-01"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-01.tgz
mv Angiogenesis-PT-01 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstools"
echo " Input is Angiogenesis-PT-01, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r020-qhx1-152646244300004"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;