Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......
=====================================================================
Generated by BenchKit 2-3254
Executing tool lola
Input is S_GPPP-PT-C1000N0000001000, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r108-blw3-149441612600589
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-0
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-1
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-10
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-11
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-12
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-13
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-14
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-15
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-2
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-3
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-4
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-5
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-6
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-7
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-8
FORMULA_NAME GPPP-PT-C1000N0000001000-CTLFireability-9

=== Now, execution of the tool begins

BK_START 1496400010272


Time: 3600 - MCC
----- Start make prepare stdout -----
===========================================================================================
S_GPPP-PT-C1000N0000001000: translating PT Petri net model.pnml into LoLA format
===========================================================================================
translating PT Petri net complete


checking for too many tokens
===========================================================================================
S_GPPP-PT-C1000N0000001000: translating PT formula CTLFireability into LoLA format
===========================================================================================
translating formula complete
touch formulae;
----- Start make result stdout -----
CTLFireability @ S_GPPP-PT-C1000N0000001000 @ 3540 seconds
----- Start make result stdout -----
lola: LoLA will run for 3540 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 55/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: finding significant places
lola: 33 places, 22 transitions, 21 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 30 transition conflict sets
lola: TASK
lola: reading formula from GPPP-PT-C1000N0000001000-CTLFireability.task
lola: A (F (FIREABLE(Phosphofructokinase))) : NOT(NOT(E (F (A (X (FIREABLE(generate))))))) : A (G (A (F ((FIREABLE(GAP_dehydrogenase) OR FIREABLE(Phosphoglycerate_kinase) OR NOT FIREABLE(Enolase)))))) : E ((E (G (NOT FIREABLE(TIM_backward))) U (FIREABLE(Transketolase2) OR A (X (FIREABLE(Ru5P_isomerase)))))) : (NOT(E (G (NOT FIREABLE(TIM_backward)))) AND ((NOT(A (F (FIREABLE(Glutathione_oxidation)))) AND NOT(E (G (FIREABLE(GAP_dehydrogenase))))) OR (E (G (NOT FIREABLE(remove))) OR FIREABLE(Phosphoclucose_isomerase)))) : E (F (A (G (FIREABLE(Phosphofructokinase))))) : NOT(A (((NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(remove)) U A (G (FIREABLE(Hexokinase)))))) : A (G (E ((NOT FIREABLE(Pyruvate_kinase) U (FIREABLE(Ru5P_isomerase) AND FIREABLE(Lactate_dehydrogenase)))))) : NOT(A (G (E (X ((FIREABLE(Ru5P_epimerase) OR FIREABLE(Hexokinase))))))) : E (F ((A (X (FIREABLE(Hexokinase))) AND A (X ((FIREABLE(Pyruvate_kinase) AND FIREABLE(Enolase))))))) : A ((((NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Transketolase1)) AND FIREABLE(Lactate_dehydrogenase)) U E (F ((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Enolase)))))) : E (F (FIREABLE(remove))) : E (X (A (F (((FIREABLE(Aldolase) OR FIREABLE(Phosphofructokinase)) AND NOT FIREABLE(Transaldolase)))))) : (E (F (FIREABLE(Glutathione_reductose))) AND (E ((NOT FIREABLE(Transketolase2) U (FIREABLE(Phosphoclucose_isomerase) AND FIREABLE(GAP_dehydrogenase)))) OR ((FIREABLE(TIM_forward) OR FIREABLE(Pyruvate_kinase)) AND (FIREABLE(Transketolase1) OR E (F (FIREABLE(Ru5P_epimerase))))))) : A (G ((E (F ((FIREABLE(GAP_dehydrogenase) OR FIREABLE(TIM_forward)))) OR E (G ((FIREABLE(Phosphoglycerate_mutase) AND FIREABLE(Ru5P_isomerase))))))) : E (F (E (G (FIREABLE(Transketolase2)))))
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (F (FIREABLE(Phosphofructokinase)))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: A(TRUE U FIREABLE(Phosphofructokinase))
lola: processed formula length: 39
lola: 1 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: no
lola: produced by: CTL model checker
lola: The net does not satisfy the given formula.
lola: ========================================
lola: subprocess 1 will run for 236 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: NOT(NOT(E (F (A (X (FIREABLE(generate)))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: E(TRUE U AX(FIREABLE(generate)))
lola: processed formula length: 32
lola: 12 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Formula contains EX or AX operators, stubborn sets not applicable
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: ========================================
lola: subprocess 2 will run for 252 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (A (F ((FIREABLE(GAP_dehydrogenase) OR FIREABLE(Phosphoglycerate_kinase) OR NOT FIREABLE(Enolase))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: NOT(E(TRUE U NOT(A(TRUE U (FIREABLE(GAP_dehydrogenase) OR FIREABLE(Phosphoglycerate_kinase) OR NOT FIREABLE(Enolase))))))
lola: processed formula length: 123
lola: 2 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 1034190 markings, 8292989 edges, 3689348869717491712 markings/sec, 0 secs
lola: 2031443 markings, 16707299 edges, 199451 markings/sec, 5 secs
lola: 3017650 markings, 25110182 edges, 197241 markings/sec, 10 secs
lola: 4002162 markings, 33422681 edges, 196902 markings/sec, 15 secs
lola: 4980943 markings, 41757843 edges, 195756 markings/sec, 20 secs
lola: 5981518 markings, 50208546 edges, 200115 markings/sec, 25 secs
lola: 6964277 markings, 58574227 edges, 196552 markings/sec, 30 secs
lola: 7946779 markings, 66879500 edges, 196500 markings/sec, 35 secs
lola: 8945482 markings, 75369927 edges, 199741 markings/sec, 40 secs
lola: 9955818 markings, 83921044 edges, 202067 markings/sec, 45 secs
lola: 10955790 markings, 92439564 edges, 199994 markings/sec, 50 secs
lola: 11971745 markings, 101023305 edges, 203191 markings/sec, 55 secs
lola: 12951554 markings, 109371528 edges, 195962 markings/sec, 60 secs
lola: 13946377 markings, 117767295 edges, 198965 markings/sec, 65 secs
lola: 14931485 markings, 126156681 edges, 197022 markings/sec, 70 secs
lola: 15911127 markings, 134434318 edges, 195928 markings/sec, 75 secs
lola: 16898640 markings, 142829424 edges, 197503 markings/sec, 80 secs
lola: 17883118 markings, 151172890 edges, 196896 markings/sec, 85 secs
lola: 18882115 markings, 159649092 edges, 199799 markings/sec, 90 secs
lola: 19871637 markings, 168044961 edges, 197904 markings/sec, 95 secs
lola: 20872316 markings, 176529762 edges, 200136 markings/sec, 100 secs
lola: 21862760 markings, 184932816 edges, 198089 markings/sec, 105 secs
lola: 22847729 markings, 193273555 edges, 196994 markings/sec, 110 secs
lola: 23816039 markings, 201530962 edges, 193662 markings/sec, 115 secs
lola: 24809945 markings, 209918157 edges, 198781 markings/sec, 120 secs
lola: 25784070 markings, 218228214 edges, 194825 markings/sec, 125 secs
lola: 26796093 markings, 226764920 edges, 202405 markings/sec, 130 secs
lola: 27764147 markings, 235019040 edges, 193611 markings/sec, 135 secs
lola: 28757877 markings, 243406471 edges, 198746 markings/sec, 140 secs
lola: 29747720 markings, 251837683 edges, 197969 markings/sec, 145 secs
lola: 30749757 markings, 260301140 edges, 200407 markings/sec, 150 secs
lola: 31729571 markings, 268647431 edges, 195963 markings/sec, 155 secs
lola: 32735473 markings, 277144276 edges, 201180 markings/sec, 160 secs
lola: 33711081 markings, 285455422 edges, 195122 markings/sec, 165 secs
lola: 34694399 markings, 293756853 edges, 196664 markings/sec, 170 secs
lola: 35667229 markings, 302025973 edges, 194566 markings/sec, 175 secs
lola: 36635780 markings, 310256473 edges, 193710 markings/sec, 180 secs
lola: 37640255 markings, 318749794 edges, 200895 markings/sec, 185 secs
lola: 38627607 markings, 327151522 edges, 197470 markings/sec, 190 secs
lola: 39645949 markings, 335772407 edges, 203668 markings/sec, 195 secs
lola: 40631210 markings, 344132767 edges, 197052 markings/sec, 200 secs
lola: 41640507 markings, 352692575 edges, 201859 markings/sec, 205 secs
lola: 42614285 markings, 360959609 edges, 194756 markings/sec, 210 secs
lola: 43610644 markings, 369389605 edges, 199272 markings/sec, 215 secs
lola: 44575775 markings, 377618774 edges, 193026 markings/sec, 220 secs
lola: 45566919 markings, 385981933 edges, 198229 markings/sec, 225 secs
lola: 46559451 markings, 394445646 edges, 198506 markings/sec, 230 secs
lola: 47558267 markings, 402873151 edges, 199763 markings/sec, 235 secs
lola: 48529747 markings, 411158453 edges, 194296 markings/sec, 240 secs
lola: 49525623 markings, 419560671 edges, 199175 markings/sec, 245 secs
lola: local time limit reached - aborting
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 3 will run for 252 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E ((E (G (NOT FIREABLE(TIM_backward))) U (FIREABLE(Transketolase2) OR A (X (FIREABLE(Ru5P_isomerase))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: E(NOT(A(TRUE U FIREABLE(TIM_backward))) U (FIREABLE(Transketolase2) OR AX(FIREABLE(Ru5P_isomerase))))
lola: processed formula length: 101
lola: 4 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Formula contains EX or AX operators, stubborn sets not applicable
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 3907983 markings, 6857240 edges, 3689348869717491712 markings/sec, 0 secs
lola: 7035159 markings, 12664993 edges, 625435 markings/sec, 5 secs
lola: 9840045 markings, 17943069 edges, 560977 markings/sec, 10 secs
lola: 12591578 markings, 23122645 edges, 550307 markings/sec, 15 secs
lola: 15315984 markings, 28243849 edges, 544881 markings/sec, 20 secs
lola: 17903815 markings, 33189749 edges, 517566 markings/sec, 25 secs
lola: 20421465 markings, 38001608 edges, 503530 markings/sec, 30 secs
lola: 22929065 markings, 42793347 edges, 501520 markings/sec, 35 secs
lola: 25425729 markings, 47558194 edges, 499333 markings/sec, 40 secs
lola: 27913919 markings, 52314548 edges, 497638 markings/sec, 45 secs
lola: 30398106 markings, 57047345 edges, 496837 markings/sec, 50 secs
lola: 32853709 markings, 61740660 edges, 491121 markings/sec, 55 secs
lola: 35339976 markings, 66492678 edges, 497253 markings/sec, 60 secs
lola: 37697455 markings, 71021683 edges, 471496 markings/sec, 65 secs
lola: 40039714 markings, 75582441 edges, 468452 markings/sec, 70 secs
lola: 42503904 markings, 80272175 edges, 492838 markings/sec, 75 secs
lola: 44802145 markings, 84693661 edges, 459648 markings/sec, 80 secs
lola: 47164957 markings, 89284547 edges, 472562 markings/sec, 85 secs
lola: 49556973 markings, 93848257 edges, 478403 markings/sec, 90 secs
lola: 51739961 markings, 98132200 edges, 436598 markings/sec, 95 secs
lola: 54193043 markings, 102807641 edges, 490616 markings/sec, 100 secs
lola: 56385461 markings, 107115198 edges, 438484 markings/sec, 105 secs
lola: 58830112 markings, 111775738 edges, 488930 markings/sec, 110 secs
lola: 60936125 markings, 115915567 edges, 421203 markings/sec, 115 secs
lola: 63367424 markings, 120542695 edges, 486260 markings/sec, 120 secs
lola: 65484277 markings, 124704055 edges, 423371 markings/sec, 125 secs
lola: 67883550 markings, 129275049 edges, 479855 markings/sec, 130 secs
lola: 70000376 markings, 133427640 edges, 423365 markings/sec, 135 secs
lola: 72383046 markings, 137973447 edges, 476534 markings/sec, 140 secs
lola: 74514399 markings, 142162380 edges, 426271 markings/sec, 145 secs
lola: 76644321 markings, 146262684 edges, 425984 markings/sec, 150 secs
lola: 78932308 markings, 150693487 edges, 457597 markings/sec, 155 secs
lola: 80931065 markings, 154625995 edges, 399751 markings/sec, 160 secs
lola: 83295531 markings, 159134405 edges, 472893 markings/sec, 165 secs
lola: 85491930 markings, 163438262 edges, 439280 markings/sec, 170 secs
lola: 87550888 markings, 167507183 edges, 411792 markings/sec, 175 secs
lola: 89960764 markings, 172077350 edges, 481975 markings/sec, 180 secs
lola: 92030991 markings, 176154602 edges, 414045 markings/sec, 185 secs
lola: 94266649 markings, 180443607 edges, 447132 markings/sec, 190 secs
lola: 96577384 markings, 184935306 edges, 462147 markings/sec, 195 secs
lola: 98636789 markings, 188997703 edges, 411881 markings/sec, 200 secs
lola: 100934594 markings, 193381395 edges, 459561 markings/sec, 205 secs
lola: 103162057 markings, 197740167 edges, 445493 markings/sec, 210 secs
lola: 105196472 markings, 201747291 edges, 406883 markings/sec, 215 secs
lola: 107446169 markings, 206047815 edges, 449939 markings/sec, 220 secs
lola: 109685754 markings, 210419220 edges, 447917 markings/sec, 225 secs
lola: 111696103 markings, 214384482 edges, 402070 markings/sec, 230 secs
lola: 113762161 markings, 218394387 edges, 413212 markings/sec, 235 secs
lola: 116206886 markings, 223091265 edges, 488945 markings/sec, 240 secs
lola: 118255026 markings, 227126333 edges, 409628 markings/sec, 245 secs
lola: local time limit reached - aborting
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 4 will run for 252 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: (NOT(E (G (NOT FIREABLE(TIM_backward)))) AND ((NOT(A (F (FIREABLE(Glutathione_oxidation)))) AND NOT(E (G (FIREABLE(GAP_dehydrogenase))))) OR (E (G (NOT FIREABLE(remove))) OR FIREABLE(Phosphoclucose_isomerase))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 4 will run for 252 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (F (FIREABLE(TIM_backward)))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: A(TRUE U FIREABLE(TIM_backward))
lola: processed formula length: 32
lola: 10 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 4838087 markings, 8444837 edges, 3689348869717491712 markings/sec, 0 secs
lola: 9166596 markings, 16448945 edges, 865702 markings/sec, 5 secs
lola: 13374095 markings, 24326433 edges, 841500 markings/sec, 10 secs
lola: 17539907 markings, 32179023 edges, 833162 markings/sec, 15 secs
lola: 21554908 markings, 39792547 edges, 803000 markings/sec, 20 secs
lola: 25568546 markings, 47470380 edges, 802728 markings/sec, 25 secs
lola: 29672247 markings, 55255898 edges, 820740 markings/sec, 30 secs
lola: 33668411 markings, 62886542 edges, 799233 markings/sec, 35 secs
lola: 37542222 markings, 70365628 edges, 774762 markings/sec, 40 secs
lola: 41635447 markings, 78151146 edges, 818645 markings/sec, 45 secs
lola: 44886137 markings, 84466858 edges, 650138 markings/sec, 50 secs
lola: 48805853 markings, 91937633 edges, 783943 markings/sec, 55 secs
lola: 52526854 markings, 99167233 edges, 744200 markings/sec, 60 secs
lola: 56521296 markings, 106803549 edges, 798888 markings/sec, 65 secs
lola: 60291847 markings, 114116950 edges, 754110 markings/sec, 70 secs
lola: 64138311 markings, 121508664 edges, 769293 markings/sec, 75 secs
lola: 68065564 markings, 129093862 edges, 785451 markings/sec, 80 secs
lola: 71665070 markings, 136121380 edges, 719901 markings/sec, 85 secs
lola: 75591434 markings, 143644056 edges, 785273 markings/sec, 90 secs
lola: 79392524 markings, 151017655 edges, 760218 markings/sec, 95 secs
lola: 82940055 markings, 157913524 edges, 709506 markings/sec, 100 secs
lola: 86841082 markings, 165429156 edges, 780205 markings/sec, 105 secs
lola: 90606286 markings, 172738638 edges, 753041 markings/sec, 110 secs
lola: 94111493 markings, 179596911 edges, 701041 markings/sec, 115 secs
lola: 97907025 markings, 186892526 edges, 759106 markings/sec, 120 secs
lola: 101729891 markings, 194296711 edges, 764573 markings/sec, 125 secs
lola: 105227592 markings, 201142648 edges, 699540 markings/sec, 130 secs
lola: 108735773 markings, 207922796 edges, 701636 markings/sec, 135 secs
lola: 112610971 markings, 215442821 edges, 775040 markings/sec, 140 secs
lola: 116354431 markings, 222720281 edges, 748692 markings/sec, 145 secs
lola: 119828161 markings, 229526804 edges, 694746 markings/sec, 150 secs
lola: 123322141 markings, 236275606 edges, 698796 markings/sec, 155 secs
lola: 127126099 markings, 243667120 edges, 760792 markings/sec, 160 secs
lola: 130828111 markings, 250866261 edges, 740402 markings/sec, 165 secs
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 5 will run for 260 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (G (NOT FIREABLE(Glutathione_oxidation)))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: NOT(A(TRUE U FIREABLE(Glutathione_oxidation)))
lola: processed formula length: 46
lola: 11 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: subprocess 6 will run for 286 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (F (NOT FIREABLE(GAP_dehydrogenase)))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: A(TRUE U NOT FIREABLE(GAP_dehydrogenase))
lola: processed formula length: 41
lola: 10 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: SUBRESULT
lola: result: unknown
lola: The Boolean predicate may be true or false.
lola: subprocess 5 will run for 260 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ========================================
lola: ========================================
lola: ...considering subproblem: E (F (A (G (FIREABLE(Phosphofructokinase)))))
lola: ========================================
lola: SUBTASK
lola: lola: ======================================== checking possible invariance
lola: possible invariance not yet implemented, converting to CTL...

lola: processed formula: E(TRUE U NOT(E(TRUE U NOT FIREABLE(Phosphofructokinase))))
lola: processed formula length: 58
lola: 3 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 1227192 markings, 9160220 edges, 3689348869717491712 markings/sec, 0 secs
lola: 2421713 markings, 18435829 edges, 238904 markings/sec, 5 secs
lola: 3576011 markings, 27502983 edges, 230860 markings/sec, 10 secs
lola: 4749658 markings, 36607417 edges, 234729 markings/sec, 15 secs
lola: 5913724 markings, 45751742 edges, 232813 markings/sec, 20 secs
lola: 7080729 markings, 54801175 edges, 233401 markings/sec, 25 secs
lola: 8215566 markings, 63710514 edges, 226967 markings/sec, 30 secs
lola: 9386681 markings, 72805535 edges, 234223 markings/sec, 35 secs
lola: 10565109 markings, 82058130 edges, 235686 markings/sec, 40 secs
lola: 11749627 markings, 91249916 edges, 236904 markings/sec, 45 secs
lola: 12926653 markings, 100455825 edges, 235405 markings/sec, 50 secs
lola: 14092673 markings, 109537452 edges, 233204 markings/sec, 55 secs
lola: 15266633 markings, 118713863 edges, 234792 markings/sec, 60 secs
lola: 16430394 markings, 127792697 edges, 232752 markings/sec, 65 secs
lola: 17615530 markings, 137035803 edges, 237027 markings/sec, 70 secs
lola: 18796986 markings, 146304186 edges, 236291 markings/sec, 75 secs
lola: 19977195 markings, 155468419 edges, 236042 markings/sec, 80 secs
lola: 21142404 markings, 164612249 edges, 233042 markings/sec, 85 secs
lola: 22321612 markings, 173771205 edges, 235842 markings/sec, 90 secs
lola: 23477356 markings, 182845027 edges, 231149 markings/sec, 95 secs
lola: 24644690 markings, 191906628 edges, 233467 markings/sec, 100 secs
lola: 25804126 markings, 201005865 edges, 231887 markings/sec, 105 secs
lola: 26986539 markings, 210185181 edges, 236483 markings/sec, 110 secs
lola: 28139028 markings, 219233750 edges, 230498 markings/sec, 115 secs
lola: 29314152 markings, 228353932 edges, 235025 markings/sec, 120 secs
lola: 30467009 markings, 237405100 edges, 230571 markings/sec, 125 secs
lola: 31631935 markings, 246445437 edges, 232985 markings/sec, 130 secs
lola: 32772000 markings, 255398756 edges, 228013 markings/sec, 135 secs
lola: 33958338 markings, 264604776 edges, 237268 markings/sec, 140 secs
lola: 35123421 markings, 273752205 edges, 233017 markings/sec, 145 secs
lola: 36322607 markings, 283061608 edges, 239837 markings/sec, 150 secs
lola: 37504621 markings, 292298763 edges, 236403 markings/sec, 155 secs
lola: 38678328 markings, 301459101 edges, 234741 markings/sec, 160 secs
lola: 39851256 markings, 310606534 edges, 234586 markings/sec, 165 secs
lola: 41019357 markings, 319749220 edges, 233620 markings/sec, 170 secs
lola: 42196805 markings, 328907084 edges, 235490 markings/sec, 175 secs
lola: 43359477 markings, 338023479 edges, 232534 markings/sec, 180 secs
lola: 44545653 markings, 347244567 edges, 237235 markings/sec, 185 secs
lola: 45703154 markings, 356336142 edges, 231500 markings/sec, 190 secs
lola: 46878510 markings, 365454657 edges, 235071 markings/sec, 195 secs
lola: 48030978 markings, 374506691 edges, 230494 markings/sec, 200 secs
lola: 49185707 markings, 383461792 edges, 230946 markings/sec, 205 secs
lola: 50340373 markings, 392512824 edges, 230933 markings/sec, 210 secs
lola: 51511052 markings, 401611660 edges, 234136 markings/sec, 215 secs
lola: 52662143 markings, 410631986 edges, 230218 markings/sec, 220 secs
lola: 53812071 markings, 419584994 edges, 229986 markings/sec, 225 secs
lola: 54906084 markings, 428117792 edges, 218803 markings/sec, 230 secs
lola: 55900457 markings, 435874727 edges, 198875 markings/sec, 235 secs
lola: 57006795 markings, 444516909 edges, 221268 markings/sec, 240 secs
lola: 58107520 markings, 453152227 edges, 220145 markings/sec, 245 secs
lola: 59231472 markings, 461893164 edges, 224790 markings/sec, 250 secs
lola: local time limit reached - aborting
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 6 will run for 260 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: NOT(A (((NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(remove)) U A (G (FIREABLE(Hexokinase))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: NOT(A((NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(remove)) U NOT(E(TRUE U NOT FIREABLE(Hexokinase)))))
lola: processed formula length: 108
lola: 9 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: ========================================
lola: subprocess 7 will run for 288 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (E ((NOT FIREABLE(Pyruvate_kinase) U (FIREABLE(Ru5P_isomerase) AND FIREABLE(Lactate_dehydrogenase))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: NOT(E(TRUE U NOT(E(NOT FIREABLE(Pyruvate_kinase) U (FIREABLE(Ru5P_isomerase) AND FIREABLE(Lactate_dehydrogenase))))))
lola: processed formula length: 117
lola: 2 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 3154648 markings, 9531191 edges, 3689348869717491712 markings/sec, 0 secs
lola: 6217027 markings, 18848201 edges, 612476 markings/sec, 5 secs
lola: 9269167 markings, 28132821 edges, 610428 markings/sec, 10 secs
lola: 12295751 markings, 37341381 edges, 605317 markings/sec, 15 secs
lola: 15328445 markings, 46567750 edges, 606539 markings/sec, 20 secs
lola: 18351566 markings, 55765547 edges, 604624 markings/sec, 25 secs
lola: 21406887 markings, 65062153 edges, 611064 markings/sec, 30 secs
lola: 24369515 markings, 74074460 edges, 592526 markings/sec, 35 secs
lola: 27255704 markings, 83172596 edges, 577238 markings/sec, 40 secs
lola: 29926834 markings, 92080696 edges, 534226 markings/sec, 45 secs
lola: 32586414 markings, 100951741 edges, 531916 markings/sec, 50 secs
lola: 35300036 markings, 110001407 edges, 542724 markings/sec, 55 secs
lola: 37985858 markings, 118959306 edges, 537164 markings/sec, 60 secs
lola: 40728460 markings, 127840850 edges, 548520 markings/sec, 65 secs
lola: 44039609 markings, 137235835 edges, 662230 markings/sec, 70 secs
lola: 47455216 markings, 147071424 edges, 683121 markings/sec, 75 secs
lola: 50792203 markings, 156680991 edges, 667397 markings/sec, 80 secs
lola: 54083881 markings, 166160348 edges, 658336 markings/sec, 85 secs
lola: 56939355 markings, 174480702 edges, 571095 markings/sec, 90 secs
lola: 59430061 markings, 181945556 edges, 498141 markings/sec, 95 secs
lola: 62007567 markings, 189812109 edges, 515501 markings/sec, 100 secs
lola: 64732160 markings, 197622450 edges, 544919 markings/sec, 105 secs
lola: 67628352 markings, 207041962 edges, 579238 markings/sec, 110 secs
lola: 70347451 markings, 216269554 edges, 543820 markings/sec, 115 secs
lola: 72999851 markings, 225271012 edges, 530480 markings/sec, 120 secs
lola: 75419562 markings, 233950722 edges, 483942 markings/sec, 125 secs
lola: 77701237 markings, 242518006 edges, 456335 markings/sec, 130 secs
lola: 79959121 markings, 251253972 edges, 451577 markings/sec, 135 secs
lola: 82155175 markings, 260564438 edges, 439211 markings/sec, 140 secs
lola: 84312611 markings, 269709706 edges, 431487 markings/sec, 145 secs
lola: 86444066 markings, 278744495 edges, 426291 markings/sec, 150 secs
lola: 88639668 markings, 288051807 edges, 439120 markings/sec, 155 secs
lola: 90781783 markings, 297134549 edges, 428423 markings/sec, 160 secs
lola: 92953276 markings, 306338798 edges, 434299 markings/sec, 165 secs
lola: 95037317 markings, 315177583 edges, 416808 markings/sec, 170 secs
lola: 97139759 markings, 324086846 edges, 420488 markings/sec, 175 secs
lola: 99242497 markings, 332998100 edges, 420548 markings/sec, 180 secs
lola: 101339273 markings, 341886929 edges, 419355 markings/sec, 185 secs
lola: 103424527 markings, 350724712 edges, 417051 markings/sec, 190 secs
lola: 105518441 markings, 359602905 edges, 418783 markings/sec, 195 secs
lola: 107611658 markings, 368478470 edges, 418643 markings/sec, 200 secs
lola: 109655277 markings, 377142207 edges, 408724 markings/sec, 205 secs
lola: 111709214 markings, 385848584 edges, 410787 markings/sec, 210 secs
lola: 113588744 markings, 394578470 edges, 375906 markings/sec, 215 secs
lola: 115423782 markings, 403163435 edges, 367008 markings/sec, 220 secs
lola: 117237586 markings, 411649082 edges, 362761 markings/sec, 225 secs
lola: 119059645 markings, 420178496 edges, 364412 markings/sec, 230 secs
lola: 120862549 markings, 428613150 edges, 360581 markings/sec, 235 secs
lola: 122674281 markings, 437089617 edges, 362346 markings/sec, 240 secs
lola: 124519903 markings, 445724938 edges, 369124 markings/sec, 245 secs
lola: 126358433 markings, 454326550 edges, 367706 markings/sec, 250 secs
lola: 128203271 markings, 462956981 edges, 368968 markings/sec, 255 secs
lola: 130028114 markings, 471498357 edges, 364969 markings/sec, 260 secs
lola: 132421137 markings, 480084789 edges, 478605 markings/sec, 265 secs
lola: 134980908 markings, 488206236 edges, 511954 markings/sec, 270 secs
lola: 137508353 markings, 496224542 edges, 505489 markings/sec, 275 secs
lola: 139971922 markings, 504040964 edges, 492714 markings/sec, 280 secs
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 8 will run for 289 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: NOT(A (G (E (X ((FIREABLE(Ru5P_epimerase) OR FIREABLE(Hexokinase)))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: E(TRUE U AX((NOT FIREABLE(Ru5P_epimerase) AND NOT FIREABLE(Hexokinase))))
lola: processed formula length: 73
lola: 7 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Formula contains EX or AX operators, stubborn sets not applicable
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: subprocess 9 will run for 330 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((A (X (FIREABLE(Hexokinase))) AND A (X ((FIREABLE(Pyruvate_kinase) AND FIREABLE(Enolase)))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: E(TRUE U (AX(FIREABLE(Hexokinase)) AND AX((FIREABLE(Pyruvate_kinase) AND FIREABLE(Enolase)))))
lola: processed formula length: 94
lola: 3 rewrites
lola: ========================================
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Formula contains EX or AX operators, stubborn sets not applicable
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: ========================================
lola: subprocess 10 will run for 385 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A ((((NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Transketolase1)) AND FIREABLE(Lactate_dehydrogenase)) U E (F ((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Enolase))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: A(((NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Transketolase1)) AND FIREABLE(Lactate_dehydrogenase)) U E(TRUE U (FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Enolase))))
lola: processed formula length: 175
lola: 2 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: ========================================
lola: subprocess 11 will run for 462 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(remove)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: 4499049 markings, 8968043 edges, 899810 markings/sec, 0 secs
lola: 8701022 markings, 17371989 edges, 840395 markings/sec, 5 secs
lola: 13844567 markings, 25711104 edges, 1028709 markings/sec, 10 secs
lola: 18713989 markings, 33502178 edges, 973884 markings/sec, 15 secs
lola: 23555829 markings, 41249125 edges, 968368 markings/sec, 20 secs
lola: 27220970 markings, 48413904 edges, 733028 markings/sec, 25 secs
lola: 30585232 markings, 55135442 edges, 672852 markings/sec, 30 secs
lola: 34852760 markings, 63670496 edges, 853506 markings/sec, 35 secs
lola: 38927158 markings, 71819295 edges, 814880 markings/sec, 40 secs
lola: 42963245 markings, 79891468 edges, 807217 markings/sec, 45 secs
lola: 47009978 markings, 87984932 edges, 809347 markings/sec, 50 secs
lola: 51765322 markings, 95937767 edges, 951069 markings/sec, 55 secs
lola: 56437771 markings, 103413686 edges, 934490 markings/sec, 60 secs
lola: 60927277 markings, 110596895 edges, 897901 markings/sec, 65 secs
lola: 65202221 markings, 117871152 edges, 854989 markings/sec, 70 secs
lola: 69114184 markings, 124920189 edges, 782393 markings/sec, 75 secs
lola: 73023752 markings, 131969729 edges, 781914 markings/sec, 80 secs
lola: 76944216 markings, 139051169 edges, 784093 markings/sec, 85 secs
lola: 80881986 markings, 146158714 edges, 787554 markings/sec, 90 secs
lola: 84782338 markings, 153184933 edges, 780070 markings/sec, 95 secs
lola: 88700400 markings, 160268428 edges, 783612 markings/sec, 100 secs
lola: 92620288 markings, 167328020 edges, 783978 markings/sec, 105 secs
lola: 96541227 markings, 174400452 edges, 784188 markings/sec, 110 secs
lola: 100410982 markings, 181409947 edges, 773951 markings/sec, 115 secs
lola: 104282832 markings, 188393291 edges, 774370 markings/sec, 120 secs
lola: 108166805 markings, 195402034 edges, 776795 markings/sec, 125 secs
lola: 112070827 markings, 202435177 edges, 780804 markings/sec, 130 secs
lola: 115897584 markings, 209359427 edges, 765351 markings/sec, 135 secs
lola: 119808536 markings, 216417673 edges, 782190 markings/sec, 140 secs
lola: 123691361 markings, 223393720 edges, 776565 markings/sec, 145 secs
lola: 127587170 markings, 230457914 edges, 779162 markings/sec, 150 secs
lola: 131455253 markings, 237449969 edges, 773617 markings/sec, 155 secs
lola: 135335843 markings, 244439278 edges, 776118 markings/sec, 160 secs
lola: 139222640 markings, 251458303 edges, 777359 markings/sec, 165 secs
lola: 143122420 markings, 258520025 edges, 779956 markings/sec, 170 secs
lola: 146973683 markings, 265509444 edges, 770253 markings/sec, 175 secs
lola: 150869552 markings, 272519163 edges, 779174 markings/sec, 180 secs
lola: 154721159 markings, 279516633 edges, 770321 markings/sec, 185 secs
lola: 158607143 markings, 286512474 edges, 777197 markings/sec, 190 secs
lola: 162481796 markings, 293463518 edges, 774931 markings/sec, 195 secs
lola: 166358202 markings, 300560290 edges, 775281 markings/sec, 200 secs
lola: 170319094 markings, 307643922 edges, 792178 markings/sec, 205 secs
lola: 174175307 markings, 314636360 edges, 771243 markings/sec, 210 secs
lola: 178071373 markings, 321623237 edges, 779213 markings/sec, 215 secs
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 12 will run for 522 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (X (A (F (((FIREABLE(Aldolase) OR FIREABLE(Phosphofructokinase)) AND NOT FIREABLE(Transaldolase))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: EX(A(TRUE U ((FIREABLE(Aldolase) OR FIREABLE(Phosphofructokinase)) AND NOT FIREABLE(Transaldolase))))
lola: processed formula length: 102
lola: 2 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Formula contains EX or AX operators, stubborn sets not applicable
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: no
lola: produced by: CTL model checker
lola: The net does not satisfy the given formula.
lola: subprocess 13 will run for 696 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: (E (F (FIREABLE(Glutathione_reductose))) AND (E ((NOT FIREABLE(Transketolase2) U (FIREABLE(Phosphoclucose_isomerase) AND FIREABLE(GAP_dehydrogenase)))) OR ((FIREABLE(TIM_forward) OR FIREABLE(Pyruvate_kinase)) AND (FIREABLE(Transketolase1) OR E (F (FIREABLE(Ru5P_epimerase)))))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: ========================================
lola: subprocess 13 will run for 696 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Glutathione_reductose)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 14 will run for 1044 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E ((NOT FIREABLE(Transketolase2) U (FIREABLE(Phosphoclucose_isomerase) AND FIREABLE(GAP_dehydrogenase))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: E(NOT FIREABLE(Transketolase2) U (FIREABLE(Phosphoclucose_isomerase) AND FIREABLE(GAP_dehydrogenase)))
lola: processed formula length: 102
lola: 1 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 2994309 markings, 9419401 edges, 3689348869717491712 markings/sec, 0 secs
lola: 5533392 markings, 18458036 edges, 507817 markings/sec, 5 secs
lola: 7700045 markings, 26868650 edges, 433331 markings/sec, 10 secs
lola: 10352904 markings, 36199314 edges, 530572 markings/sec, 15 secs
lola: 12344835 markings, 44394732 edges, 398386 markings/sec, 20 secs
lola: 14962848 markings, 53493124 edges, 523603 markings/sec, 25 secs
lola: 17081756 markings, 63016644 edges, 423782 markings/sec, 30 secs
lola: 19125377 markings, 70359622 edges, 408724 markings/sec, 35 secs
lola: 21685733 markings, 79316650 edges, 512071 markings/sec, 40 secs
lola: 24056886 markings, 88253759 edges, 474231 markings/sec, 45 secs
lola: 25830133 markings, 96930745 edges, 354649 markings/sec, 50 secs
lola: 27780855 markings, 103930431 edges, 390144 markings/sec, 55 secs
lola: 30273681 markings, 112479625 edges, 498565 markings/sec, 60 secs
lola: 32917583 markings, 121843790 edges, 528780 markings/sec, 65 secs
lola: 34672815 markings, 130588414 edges, 351046 markings/sec, 70 secs
lola: 36452745 markings, 138600112 edges, 355986 markings/sec, 75 secs
lola: 38406147 markings, 145647962 edges, 390680 markings/sec, 80 secs
lola: 40522804 markings, 153144532 edges, 423331 markings/sec, 85 secs
lola: 43081265 markings, 162436509 edges, 511692 markings/sec, 90 secs
lola: 45821804 markings, 171669390 edges, 548108 markings/sec, 95 secs
lola: 47152472 markings, 179559379 edges, 266134 markings/sec, 100 secs
lola: 48807804 markings, 187695542 edges, 331066 markings/sec, 105 secs
lola: 50613060 markings, 194212514 edges, 361051 markings/sec, 110 secs
lola: 52359523 markings, 200616468 edges, 349293 markings/sec, 115 secs
lola: 54605786 markings, 208469669 edges, 449253 markings/sec, 120 secs
lola: 57154861 markings, 217777090 edges, 509815 markings/sec, 125 secs
lola: 59844670 markings, 227015217 edges, 537962 markings/sec, 130 secs
lola: 61418194 markings, 234116343 edges, 314705 markings/sec, 135 secs
lola: 63044607 markings, 243741130 edges, 325283 markings/sec, 140 secs
lola: 64812947 markings, 251310036 edges, 353668 markings/sec, 145 secs
lola: 66719558 markings, 258262237 edges, 381322 markings/sec, 150 secs
lola: 68457544 markings, 264667365 edges, 347597 markings/sec, 155 secs
lola: 70400200 markings, 271684042 edges, 388531 markings/sec, 160 secs
lola: 73189936 markings, 281339860 edges, 557947 markings/sec, 165 secs
lola: 75685703 markings, 290632437 edges, 499153 markings/sec, 170 secs
lola: 78473219 markings, 300046654 edges, 557503 markings/sec, 175 secs
lola: 79647983 markings, 306711528 edges, 234953 markings/sec, 180 secs
lola: 81248113 markings, 316240572 edges, 320026 markings/sec, 185 secs
lola: 82940488 markings, 324104351 edges, 338475 markings/sec, 190 secs
lola: 84660283 markings, 330485053 edges, 343959 markings/sec, 195 secs
lola: 86450388 markings, 336905503 edges, 358021 markings/sec, 200 secs
lola: 88095401 markings, 343016133 edges, 329003 markings/sec, 205 secs
lola: 89867103 markings, 349472867 edges, 354340 markings/sec, 210 secs
lola: 92687303 markings, 358942897 edges, 564040 markings/sec, 215 secs
lola: 94987100 markings, 367994729 edges, 459959 markings/sec, 220 secs
lola: 97715788 markings, 377365961 edges, 545738 markings/sec, 225 secs
lola: 99968054 markings, 385626589 edges, 450453 markings/sec, 230 secs
lola: 101080596 markings, 392378656 edges, 222508 markings/sec, 235 secs
lola: 102618492 markings, 401584317 edges, 307579 markings/sec, 240 secs
lola: 104213899 markings, 409773472 edges, 319081 markings/sec, 245 secs
lola: 105965944 markings, 416370412 edges, 350409 markings/sec, 250 secs
lola: 107826917 markings, 423128451 edges, 372195 markings/sec, 255 secs
lola: 109476903 markings, 429236287 edges, 329997 markings/sec, 260 secs
lola: 111089983 markings, 435245238 edges, 322616 markings/sec, 265 secs
lola: 112982884 markings, 442095447 edges, 378580 markings/sec, 270 secs
lola: 115823714 markings, 451676222 edges, 568166 markings/sec, 275 secs
lola: 118186396 markings, 460843884 edges, 472536 markings/sec, 280 secs
lola: 120751782 markings, 470033887 edges, 513077 markings/sec, 285 secs
lola: 123472465 markings, 479299333 edges, 544137 markings/sec, 290 secs
lola: 124914963 markings, 485840190 edges, 288500 markings/sec, 295 secs
lola: 126231219 markings, 493806459 edges, 263251 markings/sec, 300 secs
lola: 127795146 markings, 503218721 edges, 312785 markings/sec, 305 secs
lola: 129407822 markings, 511570221 edges, 322535 markings/sec, 310 secs
lola: 131181580 markings, 518267461 edges, 354752 markings/sec, 315 secs
lola: 132900130 markings, 524562818 edges, 343710 markings/sec, 320 secs
lola: 134631141 markings, 530893601 edges, 346202 markings/sec, 325 secs
lola: 136235154 markings, 536847585 edges, 320803 markings/sec, 330 secs
lola: 137823140 markings, 542793420 edges, 317597 markings/sec, 335 secs
lola: 139834427 markings, 549983944 edges, 402257 markings/sec, 340 secs
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 15 will run for 1740 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: (FIREABLE(TIM_forward) OR FIREABLE(Pyruvate_kinase))
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: (FIREABLE(TIM_forward) OR FIREABLE(Pyruvate_kinase))
lola: processed formula length: 53
lola: 0 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: preprocessing
lola: The net violates the given property already in its initial state.
lola: SUBRESULT
lola: result: unknown
lola: The Boolean predicate may be true or false.
lola: subprocess 14 will run for 870 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ========================================
lola: ...considering subproblem: A (G ((E (F ((FIREABLE(GAP_dehydrogenase) OR FIREABLE(TIM_forward)))) OR E (G ((FIREABLE(Phosphoglycerate_mutase) AND FIREABLE(Ru5P_isomerase)))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: ========================================
lola: processed formula: NOT(E(TRUE U (NOT(E(TRUE U (FIREABLE(GAP_dehydrogenase) OR FIREABLE(TIM_forward)))) AND A(TRUE U (NOT FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(Ru5P_isomerase))))))
lola: processed formula length: 174
lola: 6 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 3 significant temporal operators and needs 13 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: no
lola: produced by: CTL model checker
lola: The net does not satisfy the given formula.
lola: ========================================
lola: subprocess 15 will run for 1740 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (E (G (FIREABLE(Transketolase2)))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: E(TRUE U NOT(A(TRUE U NOT FIREABLE(Transketolase2))))
lola: processed formula length: 53
lola: 3 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C1000N0000001000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: ========================================
lola: RESULT
lola:
SUMMARY: no yes unknown unknown unknown unknown yes unknown yes yes yes unknown no unknown no yes
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-0 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-1 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-2 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-3 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-4 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-5 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-6 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-7 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-8 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-9 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-10 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-11 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-12 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-13 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-14 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C1000N0000001000-CTLFireability-15 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
----- Kill lola and sara stdout -----
----- Finished stdout -----

BK_STOP 1496401810581

--------------------
content from stderr:

----- Start make prepare stderr -----
----- Start make result stderr -----
----- Start make result stderr -----
----- Kill lola and sara stderr -----
----- Finished stderr -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="S_GPPP-PT-C1000N0000001000"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="lola"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/S_GPPP-PT-C1000N0000001000.tgz
mv S_GPPP-PT-C1000N0000001000 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-3254"
echo " Executing tool lola"
echo " Input is S_GPPP-PT-C1000N0000001000, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r108-blw3-149441612600589"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;