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Model Checking Contest @ Petri Nets 2017
7th edition, Zaragoza, Spain, June 27, 2017
Execution of r028-blw3-149440264400540
Last Updated
June 27, 2017

About the Execution of LoLA for GPPP-PT-C0100N0000000100

Execution Summary
Max Memory
Used (MB)		 Time wait (ms) CPU Usage (ms) I/O Wait (ms) Computed Result Execution
Status
15952.710 669654.00 1152466.00 11206.30 TFT?TTTTFTFFFTTF normal

Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......
=====================================================================
Generated by BenchKit 2-3254
Executing tool lola
Input is GPPP-PT-C0100N0000000100, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r028-blw3-149440264400540
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-0
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-1
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-10
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-11
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-12
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-13
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-14
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-15
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-2
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-3
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-4
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-5
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-6
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-7
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-8
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-9

=== Now, execution of the tool begins

BK_START 1494721104290


Time: 3600 - MCC
----- Start make prepare stdout -----
checking for too many tokens
----- Start make result stdout -----
ReachabilityFireability @ GPPP-PT-C0100N0000000100 @ 3540 seconds
----- Start make result stdout -----
lola: LoLA will run for 3540 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 55/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: finding significant places
lola: 33 places, 22 transitions, 21 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 30 transition conflict sets
lola: TASK
lola: reading formula from GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: E (F (FIREABLE(Lactate_dehydrogenase))) : A (G (((NOT FIREABLE(Glutathione_reductose) AND NOT FIREABLE(Hexokinase) AND NOT FIREABLE(Phosphoglycerate_kinase)) OR ((NOT FIREABLE(Lactate_dehydrogenase) OR NOT FIREABLE(Phosphoglycerate_kinase)) AND NOT FIREABLE(Pyruvate_kinase))))) : A (G (NOT FIREABLE(Transketolase2))) : E (F (FIREABLE(Pyruvate_kinase))) : E (F ((NOT FIREABLE(Aldolase) AND FIREABLE(remove)))) : A (G (((FIREABLE(Aldolase)) AND NOT FIREABLE(remove)))) : A (G ((((NOT FIREABLE(Enolase) OR NOT FIREABLE(TIM_forward)) AND FIREABLE(Transketolase1)) OR ((NOT FIREABLE(Aldolase) OR NOT FIREABLE(Phosphoglycerate_mutase)) AND (NOT FIREABLE(TIM_backward) OR NOT FIREABLE(generate)))))) : E (F (FIREABLE(Phosphoglycerate_mutase))) : E (F ((((NOT FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Ru5P_isomerase)) OR ((FIREABLE(Glutathione_oxidation) OR FIREABLE(Transketolase2)) AND NOT FIREABLE(Phosphoglycerate_mutase))) AND ((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Transaldolase)) OR (FIREABLE(remove) AND FIREABLE(Lactate_dehydrogenase)))))) : A (G (((FIREABLE(Transaldolase) AND FIREABLE(remove) AND FIREABLE(Glutathione_reductose) AND FIREABLE(Phosphofructokinase)) OR (NOT FIREABLE(Glutathione_reductose) AND NOT FIREABLE(Phosphoglycerate_mutase)) OR FIREABLE(Glutathione_reductose)))) : E (F ((FIREABLE(Aldolase) AND FIREABLE(Enolase) AND NOT FIREABLE(TIM_backward) AND (NOT FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(GAP_dehydrogenase))))) : E (F ((FIREABLE(Phosphoclucose_isomerase) AND FIREABLE(Transaldolase) AND FIREABLE(Aldolase) AND ((FIREABLE(remove) AND FIREABLE(Phosphoglycerate_kinase)) OR (FIREABLE(Enolase) AND FIREABLE(TIM_forward))) AND (FIREABLE(generate) OR FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Enolase))))) : E (F ((NOT FIREABLE(Hexokinase) AND FIREABLE(Phosphofructokinase)))) : E (F (FIREABLE(Enolase))) : A (G ((NOT FIREABLE(Transaldolase) OR NOT FIREABLE(GAP_dehydrogenase)))) : E (F (FIREABLE(Phosphoglycerate_mutase)))
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Lactate_dehydrogenase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 1 will run for 236 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((NOT FIREABLE(Glutathione_reductose) AND NOT FIREABLE(Hexokinase) AND NOT FIREABLE(Phosphoglycerate_kinase)) OR ((NOT FIREABLE(Lactate_dehydrogenase) OR NOT FIREABLE(Phosphoglycerate_kinase)) AND NOT FIREABLE(Pyruvate_kinase)))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 30 literals and 6 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability.sara
lola: ========================================
lola: subprocess 2 will run for 252 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (NOT FIREABLE(Transketolase2)))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-2.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: lola: ========================================state equation: calling and running sara

lola: subprocess 3 will run for 272 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Pyruvate_kinase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-3.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 4 will run for 295 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((NOT FIREABLE(Aldolase) AND FIREABLE(remove))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 3 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-4.sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-2.sara.
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-4.sara.
sara: place or transition ordering is non-deterministic
sara: place or transition ordering is non-deterministic


lola: state equation: solution impossible
lola: SUBRESULT
lola: result: no
lola: produced by: state equation
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 5 will run for 321 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((FIREABLE(Aldolase)) AND NOT FIREABLE(remove))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 3 literals and 2 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: ========================================
lola: subprocess 6 will run for 354 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((((NOT FIREABLE(Enolase) OR NOT FIREABLE(TIM_forward)) AND FIREABLE(Transketolase1)) OR ((NOT FIREABLE(Aldolase) OR NOT FIREABLE(Phosphoglycerate_mutase)) AND (NOT FIREABLE(TIM_backward) OR NOT FIREABLE(generate))))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 20 literals and 6 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-6.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: ========================================
lola: subprocess 7 will run for 393 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Phosphoglycerate_mutase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-7.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 8 will run for 442 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((((NOT FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Ru5P_isomerase)) OR ((FIREABLE(Glutathione_oxidation) OR FIREABLE(Transketolase2)) AND NOT FIREABLE(Phosphoglycerate_mutase))) AND ((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Transaldolase)) OR (FIREABLE(remove) AND FIREABLE(Lactate_dehydrogenase))))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 100 literals and 16 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-8.sara
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 9 will run for 505 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((FIREABLE(Transaldolase) AND FIREABLE(remove) AND FIREABLE(Glutathione_reductose) AND FIREABLE(Phosphofructokinase)) OR (NOT FIREABLE(Glutathione_reductose) AND NOT FIREABLE(Phosphoglycerate_mutase)) OR FIREABLE(Glutathione_reductose))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 54 literals and 18 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-9.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-9.sara.
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: ========================================
lola: subprocess 10 will run for 590 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Aldolase) AND FIREABLE(Enolase) AND NOT FIREABLE(TIM_backward) AND (NOT FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(GAP_dehydrogenase)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 20 literals and 5 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-10.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 11 will run for 708 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Phosphoclucose_isomerase) AND FIREABLE(Transaldolase) AND FIREABLE(Aldolase) AND ((FIREABLE(remove) AND FIREABLE(Phosphoglycerate_kinase)) OR (FIREABLE(Enolase) AND FIREABLE(TIM_forward))) AND (FIREABLE(generate) OR FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Enolase)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 53 literals and 5 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-11.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-11.sara.
sara: place or transition ordering is non-deterministic
lola: sara is running 0 secs || 3039723 markings, 7988644 edges, 607945 markings/sec, 0 secs
lola: sara is running 5 secs || 5775797 markings, 15244473 edges, 547215 markings/sec, 5 secs
lola: sara is running 10 secs || 8773044 markings, 23183315 edges, 599449 markings/sec, 10 secs
lola: sara is running 15 secs || 10755091 markings, 28680174 edges, 396409 markings/sec, 15 secs
lola: sara is running 20 secs || 12840208 markings, 34525033 edges, 417023 markings/sec, 20 secs
lola: sara is running 25 secs || 14807616 markings, 40267077 edges, 393482 markings/sec, 25 secs
lola: sara is running 30 secs || 16833343 markings, 46126013 edges, 405145 markings/sec, 30 secs
lola: sara is running 35 secs || 18574130 markings, 51179151 edges, 348157 markings/sec, 35 secs
lola: sara is running 40 secs || 20435269 markings, 56493681 edges, 372228 markings/sec, 40 secs
lola: sara is running 45 secs || 22567948 markings, 61959664 edges, 426536 markings/sec, 45 secs
lola: sara is running 50 secs || 24935316 markings, 68063312 edges, 473474 markings/sec, 50 secs
lola: sara is running 55 secs || 26911430 markings, 73440919 edges, 395223 markings/sec, 55 secs
lola: sara is running 60 secs || 28589991 markings, 78030718 edges, 335712 markings/sec, 60 secs
lola: sara is running 65 secs || 30533892 markings, 83529011 edges, 388780 markings/sec, 65 secs
lola: sara is running 70 secs || 32205549 markings, 88462461 edges, 334331 markings/sec, 70 secs
lola: sara is running 75 secs || 34265916 markings, 94353377 edges, 412073 markings/sec, 75 secs
lola: sara is running 80 secs || 36364520 markings, 100244825 edges, 419721 markings/sec, 80 secs
lola: sara is running 85 secs || 38487631 markings, 106148044 edges, 424622 markings/sec, 85 secs
lola: sara is running 90 secs || 40506952 markings, 111844191 edges, 403864 markings/sec, 90 secs
lola: sara is running 95 secs || 42416272 markings, 117747790 edges, 381864 markings/sec, 95 secs
lola: sara is running 100 secs || 44632169 markings, 124019248 edges, 443179 markings/sec, 100 secs
lola: sara is running 105 secs || 46641437 markings, 129634774 edges, 401854 markings/sec, 105 secs
lola: sara is running 110 secs || 48578190 markings, 135144926 edges, 387351 markings/sec, 110 secs
lola: sara is running 115 secs || 49931009 markings, 139810888 edges, 270564 markings/sec, 115 secs
lola: sara is running 120 secs || 51318509 markings, 144372195 edges, 277500 markings/sec, 120 secs
lola: sara is running 125 secs || 53505256 markings, 150132769 edges, 437349 markings/sec, 125 secs
lola: sara is running 130 secs || 56093336 markings, 156686607 edges, 517616 markings/sec, 130 secs
lola: sara is running 135 secs || 58149822 markings, 162364270 edges, 411297 markings/sec, 135 secs
lola: sara is running 140 secs || 59948476 markings, 167190776 edges, 359731 markings/sec, 140 secs
lola: sara is running 145 secs || 61532175 markings, 171766564 edges, 316740 markings/sec, 145 secs
lola: sara is running 150 secs || 63232800 markings, 176344501 edges, 340125 markings/sec, 150 secs
lola: sara is running 155 secs || 64870851 markings, 181054899 edges, 327610 markings/sec, 155 secs
lola: sara is running 160 secs || 66509928 markings, 185770893 edges, 327815 markings/sec, 160 secs
lola: sara is running 165 secs || 68064728 markings, 190461943 edges, 310960 markings/sec, 165 secs
lola: sara is running 170 secs || 69996472 markings, 196045517 edges, 386349 markings/sec, 170 secs
lola: sara is running 175 secs || 71997967 markings, 201687659 edges, 400299 markings/sec, 175 secs
lola: sara is running 180 secs || 74021503 markings, 207433222 edges, 404707 markings/sec, 180 secs
lola: sara is running 185 secs || 76052378 markings, 213186308 edges, 406175 markings/sec, 185 secs
lola: sara is running 190 secs || 78094842 markings, 218813210 edges, 408493 markings/sec, 190 secs
lola: sara is running 195 secs || 80115513 markings, 224494646 edges, 404134 markings/sec, 195 secs
lola: sara is running 200 secs || 81640441 markings, 229415138 edges, 304986 markings/sec, 200 secs
lola: sara is running 205 secs || 83841385 markings, 235446669 edges, 440189 markings/sec, 205 secs
lola: sara is running 210 secs || 85839695 markings, 241188719 edges, 399662 markings/sec, 210 secs
lola: sara is running 215 secs || 87652789 markings, 246445795 edges, 362619 markings/sec, 215 secs
lola: sara is running 220 secs || 89749823 markings, 251996491 edges, 419407 markings/sec, 220 secs
lola: sara is running 225 secs || 91503879 markings, 257005725 edges, 350811 markings/sec, 225 secs
lola: sara is running 230 secs || 92749478 markings, 261401055 edges, 249120 markings/sec, 230 secs
lola: sara is running 235 secs || 93971783 markings, 265825382 edges, 244461 markings/sec, 235 secs
lola: sara is running 240 secs || 95197875 markings, 270114618 edges, 245218 markings/sec, 240 secs
lola: sara is running 245 secs || 96494103 markings, 274437272 edges, 259246 markings/sec, 245 secs
lola: sara is running 250 secs || 98099875 markings, 278735658 edges, 321154 markings/sec, 250 secs
lola: sara is running 255 secs || 99269273 markings, 282441417 edges, 233880 markings/sec, 255 secs
lola: sara is running 260 secs || 100556016 markings, 286096506 edges, 257349 markings/sec, 260 secs
lola: sara is running 265 secs || 101806064 markings, 289666254 edges, 250010 markings/sec, 265 secs
lola: sara is running 270 secs || 103087739 markings, 293311744 edges, 256335 markings/sec, 270 secs
lola: sara is running 275 secs || 104425146 markings, 297107471 edges, 267481 markings/sec, 275 secs
lola: sara is running 280 secs || 106802760 markings, 303269638 edges, 475523 markings/sec, 280 secs
lola: sara is running 285 secs || 109139520 markings, 309351135 edges, 467352 markings/sec, 285 secs
lola: sara is running 290 secs || 111335093 markings, 315410166 edges, 439115 markings/sec, 290 secs
lola: sara is running 295 secs || 113386299 markings, 321005968 edges, 410241 markings/sec, 295 secs
lola: sara is running 300 secs || 115214985 markings, 326358749 edges, 365737 markings/sec, 300 secs
lola: sara is running 305 secs || 116935777 markings, 330977664 edges, 344158 markings/sec, 305 secs
lola: sara is running 310 secs || 118461813 markings, 335442825 edges, 305207 markings/sec, 310 secs
lola: sara is running 315 secs || 120061322 markings, 339703449 edges, 319902 markings/sec, 315 secs
lola: sara is running 320 secs || 121581380 markings, 344110035 edges, 304012 markings/sec, 320 secs
lola: sara is running 325 secs || 123150931 markings, 348628791 edges, 313910 markings/sec, 325 secs
lola: sara is running 330 secs || 124637091 markings, 353077334 edges, 297232 markings/sec, 330 secs
lola: sara is running 335 secs || 126132396 markings, 357528640 edges, 299061 markings/sec, 335 secs
lola: sara is running 340 secs || 128071276 markings, 363164391 edges, 387776 markings/sec, 340 secs
lola: sara is running 345 secs || 129962510 markings, 368602470 edges, 378247 markings/sec, 345 secs
lola: sara is running 350 secs || 131879990 markings, 374105964 edges, 383496 markings/sec, 350 secs
lola: sara is running 355 secs || 133857695 markings, 379543171 edges, 395541 markings/sec, 355 secs
lola: sara is running 360 secs || 135822010 markings, 385141866 edges, 392863 markings/sec, 360 secs
lola: sara is running 365 secs || 137850442 markings, 390708247 edges, 405686 markings/sec, 365 secs
lola: sara is running 370 secs || 139765927 markings, 396104596 edges, 383097 markings/sec, 370 secs
lola: sara is running 375 secs || 141599946 markings, 401235150 edges, 366804 markings/sec, 375 secs
lola: sara is running 380 secs || 142975663 markings, 405859522 edges, 275143 markings/sec, 380 secs
lola: sara is running 385 secs || 145011982 markings, 411581022 edges, 407264 markings/sec, 385 secs
lola: sara is running 390 secs || 147238981 markings, 417289411 edges, 445400 markings/sec, 390 secs
lola: sara is running 395 secs || 148951062 markings, 422569044 edges, 342416 markings/sec, 395 secs
lola: sara is running 400 secs || 150503798 markings, 427110207 edges, 310547 markings/sec, 400 secs
lola: sara is running 405 secs || 152545626 markings, 432581024 edges, 408366 markings/sec, 405 secs
lola: sara is running 410 secs || 154525673 markings, 437892097 edges, 396009 markings/sec, 410 secs
lola: sara is running 415 secs || 155936862 markings, 442311184 edges, 282238 markings/sec, 415 secs
lola: sara is running 420 secs || 156975225 markings, 446097293 edges, 207673 markings/sec, 420 secs
lola: sara is running 425 secs || 158169630 markings, 450401117 edges, 238881 markings/sec, 425 secs
lola: sara is running 430 secs || 159305183 markings, 454605996 edges, 227111 markings/sec, 430 secs
lola: sara is running 435 secs || 160467606 markings, 458709614 edges, 232485 markings/sec, 435 secs
lola: sara is running 440 secs || 161733022 markings, 462966311 edges, 253083 markings/sec, 440 secs
lola: sara is running 445 secs || 162999265 markings, 466983268 edges, 253249 markings/sec, 445 secs
lola: sara is running 450 secs || 164483161 markings, 470903065 edges, 296779 markings/sec, 450 secs
lola: sara is running 455 secs || 165574232 markings, 474376712 edges, 218214 markings/sec, 455 secs
lola: sara is running 460 secs || 167057287 markings, 478673756 edges, 296611 markings/sec, 460 secs
lola: sara is running 465 secs || 168867683 markings, 483775582 edges, 362079 markings/sec, 465 secs
lola: sara is running 470 secs || 170511647 markings, 488535495 edges, 328793 markings/sec, 470 secs
lola: sara is running 475 secs || 172391398 markings, 493878152 edges, 375950 markings/sec, 475 secs
lola: sara is running 480 secs || 174441587 markings, 499444942 edges, 410038 markings/sec, 480 secs
lola: sara is running 485 secs || 177032027 markings, 506034680 edges, 518088 markings/sec, 485 secs
lola: sara is running 490 secs || 179258795 markings, 512052355 edges, 445354 markings/sec, 490 secs
lola: sara is running 495 secs || 181212904 markings, 517374891 edges, 390822 markings/sec, 495 secs
lola: sara is running 500 secs || 182828942 markings, 521890105 edges, 323208 markings/sec, 500 secs
lola: sara is running 505 secs || 184402878 markings, 526443857 edges, 314787 markings/sec, 505 secs
lola: sara is running 510 secs || 185999378 markings, 530735089 edges, 319300 markings/sec, 510 secs
lola: sara is running 515 secs || 187478556 markings, 535090092 edges, 295836 markings/sec, 515 secs
lola: sara is running 520 secs || 189113504 markings, 539562645 edges, 326990 markings/sec, 520 secs
lola: sara is running 525 secs || 190551309 markings, 543656277 edges, 287561 markings/sec, 525 secs
lola: sara is running 530 secs || 192204843 markings, 548183347 edges, 330707 markings/sec, 530 secs
lola: sara is running 535 secs || 193618363 markings, 552201080 edges, 282704 markings/sec, 535 secs
lola: sara is running 540 secs || 195264159 markings, 556843105 edges, 329159 markings/sec, 540 secs
lola: sara is running 545 secs || 196711201 markings, 561168533 edges, 289408 markings/sec, 545 secs
lola: sara is running 550 secs || 198159062 markings, 565554110 edges, 289572 markings/sec, 550 secs
lola: sara is running 555 secs || 199498508 markings, 569555388 edges, 267889 markings/sec, 555 secs
lola: sara is running 560 secs || 199518660 markings, 569613178 edges, 4030 markings/sec, 560 secs
lola: sara is running 565 secs || 199557162 markings, 569723679 edges, 7700 markings/sec, 565 secs
lola: sara is running 570 secs || 199563486 markings, 569741826 edges, 1265 markings/sec, 570 secs
lola: sara is running 575 secs || 199563558 markings, 569742011 edges, 14 markings/sec, 575 secs
lola: sara is running 580 secs || 199582658 markings, 569796876 edges, 3820 markings/sec, 580 secs
lola: sara is running 585 secs || 199584235 markings, 569801343 edges, 315 markings/sec, 585 secs
lola: sara is running 590 secs || 199584315 markings, 569801598 edges, 16 markings/sec, 590 secs
lola: sara is running 595 secs || 199587153 markings, 569809756 edges, 568 markings/sec, 595 secs
lola: sara is running 600 secs || 199587217 markings, 569809960 edges, 13 markings/sec, 600 secs
lola: sara is running 605 secs || 199597773 markings, 569840271 edges, 2111 markings/sec, 605 secs
lola: sara is running 610 secs || 199597857 markings, 569840473 edges, 17 markings/sec, 610 secs
lola: sara is running 615 secs || 199599393 markings, 569844859 edges, 307 markings/sec, 615 secs
lola: sara is running 620 secs || 199624830 markings, 569917906 edges, 5087 markings/sec, 620 secs
lola: sara is running 625 secs || 199635846 markings, 569949454 edges, 2203 markings/sec, 625 secs
lola: sara is running 630 secs || 199635906 markings, 569949640 edges, 12 markings/sec, 630 secs
lola: sara is running 635 secs || 199639625 markings, 569960330 edges, 744 markings/sec, 635 secs
lola: sara is running 640 secs || 199651374 markings, 569994039 edges, 2350 markings/sec, 640 secs
lola: sara is running 645 secs || 199665596 markings, 570034863 edges, 2844 markings/sec, 645 secs
lola: sara is running 650 secs || 199681375 markings, 570080150 edges, 3156 markings/sec, 650 secs
lola: sara is running 655 secs || 199687917 markings, 570098914 edges, 1308 markings/sec, 655 secs
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 12 will run for 717 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((NOT FIREABLE(Hexokinase) AND FIREABLE(Phosphofructokinase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 3 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: subprocess 13 will run for 957 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Enolase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: lola: using 84 bytes per marking, with 0 unused bits
========================================lola:
using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 14 will run for 1435 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Transaldolase) OR NOT FIREABLE(GAP_dehydrogenase))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 7 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-14.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-14.sara.
sara: place or transition ordering is non-deterministic

lola: state equation: solution impossible
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is invariant.
lola: ========================================
lola: subprocess 15 will run for 2871 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Phosphoglycerate_mutase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-15.sara
lola: RESULT
lola:
SUMMARY: yes no no yes no no no yes yes no yes unknown yes yes yes yes
lola: state equation: calling and running sara
lola: ========================================
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-15.sara.
sara: place or transition ordering is non-deterministic

FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-0 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-1 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-2 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-3 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-4 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-5 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-6 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-7 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-8 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-9 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-10 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-11 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-12 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-13 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-14 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-15 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
----- Kill lola and sara stdout -----
----- Finished stdout -----

BK_STOP 1494721773944

--------------------
content from stderr:

----- Start make prepare stderr -----
----- Start make result stderr -----
----- Start make result stderr -----
----- Kill lola and sara stderr -----
----- Finished stderr -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0100N0000000100"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="lola"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0100N0000000100.tgz
mv GPPP-PT-C0100N0000000100 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-3254"
echo " Executing tool lola"
echo " Input is GPPP-PT-C0100N0000000100, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r028-blw3-149440264400540"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;