Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......
=====================================================================
Generated by BenchKit 2-3254
Executing tool itstools
Input is S_MAPK-PT-320, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r120-blw7-149441651900212
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPK-PT-320-LTLCardinality-0
FORMULA_NAME MAPK-PT-320-LTLCardinality-1
FORMULA_NAME MAPK-PT-320-LTLCardinality-10
FORMULA_NAME MAPK-PT-320-LTLCardinality-11
FORMULA_NAME MAPK-PT-320-LTLCardinality-12
FORMULA_NAME MAPK-PT-320-LTLCardinality-13
FORMULA_NAME MAPK-PT-320-LTLCardinality-14
FORMULA_NAME MAPK-PT-320-LTLCardinality-15
FORMULA_NAME MAPK-PT-320-LTLCardinality-2
FORMULA_NAME MAPK-PT-320-LTLCardinality-3
FORMULA_NAME MAPK-PT-320-LTLCardinality-4
FORMULA_NAME MAPK-PT-320-LTLCardinality-5
FORMULA_NAME MAPK-PT-320-LTLCardinality-6
FORMULA_NAME MAPK-PT-320-LTLCardinality-7
FORMULA_NAME MAPK-PT-320-LTLCardinality-8
FORMULA_NAME MAPK-PT-320-LTLCardinality-9

=== Now, execution of the tool begins

BK_START 1496432466214


Using solver YICES2 to compute partial order matrices.
Built C files in :
/home/mcc/execution
its-ltl command run as :

/home/mcc/BenchKit/eclipse/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201705302212/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock
Read 16 LTL properties
Checking formula 0 : !((X(F(F("RafP_Phase1<=ERKP")))))
Formula 0 simplified : !XF"RafP_Phase1<=ERKP"
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 30 rows 22 cols
invariant : 1'ERKPP_Phase3 + 1'ERKP_Phase3 + 1'Phase3= 240
invariant : 1'ERK_MEKPP + 1'ERKP_MEKPP + 1'MEK + 1'MEKPP + -1'Phase2 + 1'MEKP + 1'MEKP_RafP + 1'MEK_RafP= 0
invariant : 1'Phase1 + 1'RafP_Phase1= 240
invariant : 1'Phase2 + 1'MEKP_Phase2 + 1'MEKPP_Phase2= 160
invariant : 1'ERK_MEKPP + 1'ERKP_MEKPP + 1'ERKPP_Phase3 + 1'ERKP_Phase3 + 1'ERKP + 1'ERKPP + 1'ERK= 240
invariant : -1'ERK_MEKPP + -1'ERKP_MEKPP + -1'Phase1 + -1'MEK + -1'MEKPP + 1'Phase2 + -1'MEKP + 1'RafP + 1'Raf_RasGTP + 1'Raf= 80
invariant : 1'Raf_RasGTP + 1'RasGTP= 80
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
Exit code :0
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Exit code :0
Exit code :0
FORMULA MAPK-PT-320-LTLCardinality-0 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :1
FORMULA MAPK-PT-320-LTLCardinality-1 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :1
FORMULA MAPK-PT-320-LTLCardinality-2 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :0
FORMULA MAPK-PT-320-LTLCardinality-3 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :0
FORMULA MAPK-PT-320-LTLCardinality-4 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :0
FORMULA MAPK-PT-320-LTLCardinality-5 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :1
FORMULA MAPK-PT-320-LTLCardinality-6 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :1
FORMULA MAPK-PT-320-LTLCardinality-7 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :1
FORMULA MAPK-PT-320-LTLCardinality-8 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :0
FORMULA MAPK-PT-320-LTLCardinality-9 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :1
FORMULA MAPK-PT-320-LTLCardinality-10 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :1
FORMULA MAPK-PT-320-LTLCardinality-11 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :1
FORMULA MAPK-PT-320-LTLCardinality-12 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :1
FORMULA MAPK-PT-320-LTLCardinality-13 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :1
FORMULA MAPK-PT-320-LTLCardinality-14 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Exit code :1
FORMULA MAPK-PT-320-LTLCardinality-15 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Detected timeout of ITS tools.

BK_STOP 1496432470030

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt
+ ulimit -s 65536
+ java -Dosgi.requiredJavaVersion=1.6 -Xss8m -Xms40m -Xmx8192m -Declipse.pde.launch=true -Dfile.encoding=UTF-8 -classpath /home/mcc/BenchKit//eclipse/plugins/org.eclipse.equinox.launcher_1.3.201.v20161025-1711.jar org.eclipse.equinox.launcher.Main -application fr.lip6.move.gal.application.pnmcc -data /home/mcc/BenchKit//workspace -os linux -ws gtk -arch x86_64 -nl en_US -consoleLog -pnfolder /home/mcc/execution -examination LTLCardinality -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt
Jun 02, 2017 7:41:07 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 02, 2017 7:41:07 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 33 ms
Jun 02, 2017 7:41:07 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 22 places.
Jun 02, 2017 7:41:07 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 30 transitions.
Jun 02, 2017 7:41:07 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 51 ms
Jun 02, 2017 7:41:07 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 12 ms
Jun 02, 2017 7:41:07 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 2 ms
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 7 place invariants in 11 ms
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 22 variables to be positive in 34 ms
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 30 transitions.
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Completed :0/30 took 2 ms. Total solver calls (SAT/UNSAT): 3(2/1)
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 48 ms. Total solver calls (SAT/UNSAT): 156(66/90)
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 30 transitions.
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 37 ms. Total solver calls (SAT/UNSAT): 156(76/80)
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 30 transitions.
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Finished enabling matrix. took 87 ms. Total solver calls (SAT/UNSAT): 465(465/0)
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeDoNotAccord
INFO: Computing Do-Not-Accords matrix : 30 transitions.
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Completed DNA matrix. took 419 ms. Total solver calls (SAT/UNSAT): 114(0/114)
Jun 02, 2017 7:41:08 PM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 822ms conformant to PINS in folder :/home/mcc/execution
Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, --when, --ltl, X(<>(<>((LTLAP0==true))))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.001: loading model GAL
pins2lts-seq, 0.001: completed loading model GAL
pins2lts-seq, 0.001: LTL layer: formula: X(<>(<>((LTLAP0==true))))
pins2lts-seq, 0.001: Expression is: (X (<> (<> (LTLAP0 == true ))))
pins2lts-seq, 0.001: buchi has 2 states
pins2lts-seq, 0.001: state 0: accepting
pins2lts-seq, 0.001: -> 1, | true
pins2lts-seq, 0.001: state 1: accepting
pins2lts-seq, 0.001: -> 1, | !(LTLAP0 == true )
pins2lts-seq, 0.002: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.002: State length is 23, there are 32 groups
pins2lts-seq, 0.002: Running scc search strategy
pins2lts-seq, 0.002: Using a tree for state storage
pins2lts-seq, 0.003: state space 2 levels, 2 states 1 transitions

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, -p, --pins-guards, --when, --ltl, (LTLAP1==true)], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: Initializing POR dependencies: labels 52, guards 30
pins2lts-seq, 0.001: LTL layer: formula: (LTLAP1==true)
pins2lts-seq, 0.001: Expression is: (LTLAP1 == true )
pins2lts-seq, 0.001: buchi has 2 states
pins2lts-seq, 0.001: state 0: accepting
pins2lts-seq, 0.001: -> 1, | !(LTLAP1 == true )
pins2lts-seq, 0.001: state 1: accepting
pins2lts-seq, 0.001: -> 1, | true
pins2lts-seq, 0.001: Forcing the use of a cycle proviso. For best results use --proviso=color.
pins2lts-seq, 0.001: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.001: State length is 23, there are 32 groups
pins2lts-seq, 0.001: Running scc search strategy
pins2lts-seq, 0.001: Using a tree for state storage
pins2lts-seq, 0.001: Visible groups: 0 / 32, labels: 1 / 53
pins2lts-seq, 0.001: POR cycle proviso: stack (ltl)
pins2lts-seq, 0.003: accepting cycle found!
pins2lts-seq, 0.003: exiting now

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, --when, --ltl, []([]([](X((LTLAP2==true)))))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: LTL layer: formula: []([]([](X((LTLAP2==true)))))
pins2lts-seq, 0.000: Expression is: ([] ([] ([] (X (LTLAP2 == true )))))
pins2lts-seq, 0.000: buchi has 5 states
pins2lts-seq, 0.000: state 0: non-accepting
pins2lts-seq, 0.000: -> 1, | true
pins2lts-seq, 0.000: state 1: non-accepting
pins2lts-seq, 0.000: -> 1, | true
pins2lts-seq, 0.000: -> 2, | true
pins2lts-seq, 0.000: -> 3, | !(LTLAP2 == true )
pins2lts-seq, 0.000: -> 4, | true
pins2lts-seq, 0.000: state 2: non-accepting
pins2lts-seq, 0.000: -> 2, | true
pins2lts-seq, 0.000: -> 3, | !(LTLAP2 == true )
pins2lts-seq, 0.000: state 3: accepting
pins2lts-seq, 0.000: -> 3, | true
pins2lts-seq, 0.000: state 4: non-accepting
pins2lts-seq, 0.000: -> 4, | true
pins2lts-seq, 0.000: -> 3, | !(LTLAP2 == true )
pins2lts-seq, 0.000: -> 2, | true
pins2lts-seq, 0.001: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.001: State length is 23, there are 41 groups
pins2lts-seq, 0.001: Running scc search strategy
pins2lts-seq, 0.001: Using a tree for state storage
pins2lts-seq, 0.002: accepting cycle found!
pins2lts-seq, 0.002: exiting now

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, --when, --ltl, X((<>((LTLAP3==true)))U(<>((LTLAP4==true))))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: LTL layer: formula: X((<>((LTLAP3==true)))U(<>((LTLAP4==true))))
pins2lts-seq, 0.000: Expression is: (X ((<> (LTLAP3 == true )) U (<> (LTLAP4 == true ))))
pins2lts-seq, 0.000: buchi has 2 states
pins2lts-seq, 0.000: state 0: accepting
pins2lts-seq, 0.000: -> 1, | true
pins2lts-seq, 0.000: state 1: accepting
pins2lts-seq, 0.000: -> 1, | !(LTLAP4 == true )
pins2lts-seq, 0.000: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.000: State length is 23, there are 32 groups
pins2lts-seq, 0.000: Running scc search strategy
pins2lts-seq, 0.000: Using a tree for state storage
pins2lts-seq, 0.001: state space 2 levels, 2 states 1 transitions

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, -p, --pins-guards, --when, --ltl, (LTLAP5==true)], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: Initializing POR dependencies: labels 52, guards 30
pins2lts-seq, 0.001: LTL layer: formula: (LTLAP5==true)
pins2lts-seq, 0.001: Expression is: (LTLAP5 == true )
pins2lts-seq, 0.001: buchi has 2 states
pins2lts-seq, 0.001: state 0: accepting
pins2lts-seq, 0.001: -> 1, | !(LTLAP5 == true )
pins2lts-seq, 0.001: state 1: accepting
pins2lts-seq, 0.001: -> 1, | true
pins2lts-seq, 0.002: Forcing the use of a cycle proviso. For best results use --proviso=color.
pins2lts-seq, 0.002: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.002: State length is 23, there are 32 groups
pins2lts-seq, 0.002: Running scc search strategy
pins2lts-seq, 0.002: Using a tree for state storage
pins2lts-seq, 0.002: Visible groups: 0 / 32, labels: 1 / 53
pins2lts-seq, 0.002: POR cycle proviso: stack (ltl)
pins2lts-seq, 0.004: state space 1 levels, 1 states 0 transitions

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, --when, --ltl, <>((X((LTLAP5==true)))U((LTLAP6==true)))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: LTL layer: formula: <>((X((LTLAP5==true)))U((LTLAP6==true)))
pins2lts-seq, 0.000: Expression is: (<> ((X (LTLAP5 == true )) U (LTLAP6 == true )))
pins2lts-seq, 0.000: buchi has 1 states
pins2lts-seq, 0.000: state 0: accepting
pins2lts-seq, 0.000: -> 0, | !(LTLAP6 == true )
pins2lts-seq, 0.000: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.000: State length is 23, there are 31 groups
pins2lts-seq, 0.000: Running scc search strategy
pins2lts-seq, 0.000: Using a tree for state storage
pins2lts-seq, 0.002: state space 1 levels, 1 states 0 transitions

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, -p, --pins-guards, --when, --ltl, []([](((LTLAP7==true))U((LTLAP8==true))))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: Initializing POR dependencies: labels 52, guards 30
pins2lts-seq, 0.000: LTL layer: formula: []([](((LTLAP7==true))U((LTLAP8==true))))
pins2lts-seq, 0.000: Expression is: ([] ([] ((LTLAP7 == true ) U (LTLAP8 == true ))))
pins2lts-seq, 0.001: buchi has 3 states
pins2lts-seq, 0.001: state 0: non-accepting
pins2lts-seq, 0.001: -> 0, | true
pins2lts-seq, 0.001: -> 1, | !(LTLAP8 == true ) && !(LTLAP7 == true )
pins2lts-seq, 0.001: -> 2, | !(LTLAP8 == true )
pins2lts-seq, 0.001: state 1: accepting
pins2lts-seq, 0.001: -> 1, | true
pins2lts-seq, 0.001: state 2: accepting
pins2lts-seq, 0.001: -> 2, | !(LTLAP8 == true )
pins2lts-seq, 0.001: -> 1, | !(LTLAP8 == true ) && !(LTLAP7 == true )
pins2lts-seq, 0.001: Forcing the use of a cycle proviso. For best results use --proviso=color.
pins2lts-seq, 0.001: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.001: State length is 23, there are 36 groups
pins2lts-seq, 0.001: Running scc search strategy
pins2lts-seq, 0.001: Using a tree for state storage
pins2lts-seq, 0.001: Visible groups: 273 / 36, labels: 2 / 53
pins2lts-seq, 0.001: POR cycle proviso: stack (ltl)
pins2lts-seq, 0.002: accepting cycle found!
pins2lts-seq, 0.002: exiting now

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, --when, --ltl, <>(X(((LTLAP9==true))U((LTLAP10==true))))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: LTL layer: formula: <>(X(((LTLAP9==true))U((LTLAP10==true))))
pins2lts-seq, 0.000: Expression is: (<> (X ((LTLAP9 == true ) U (LTLAP10 == true ))))
pins2lts-seq, 0.000: buchi has 2 states
pins2lts-seq, 0.000: state 0: accepting
pins2lts-seq, 0.000: -> 1, | true
pins2lts-seq, 0.000: state 1: accepting
pins2lts-seq, 0.000: -> 1, | !(LTLAP10 == true )
pins2lts-seq, 0.000: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.000: State length is 23, there are 32 groups
pins2lts-seq, 0.000: Running scc search strategy
pins2lts-seq, 0.000: Using a tree for state storage
pins2lts-seq, 0.001: accepting cycle found!
pins2lts-seq, 0.001: exiting now

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, --when, --ltl, (X([]((LTLAP11==true))))U(((LTLAP12==true))U((LTLAP13==true)))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: LTL layer: formula: (X([]((LTLAP11==true))))U(((LTLAP12==true))U((LTLAP13==true)))
pins2lts-seq, 0.000: Expression is: ((X ([] (LTLAP11 == true ))) U ((LTLAP12 == true ) U (LTLAP13 == true )))
pins2lts-seq, 0.000: buchi has 5 states
pins2lts-seq, 0.000: state 0: accepting
pins2lts-seq, 0.000: -> 1, | !(LTLAP13 == true ) && !(LTLAP12 == true )
pins2lts-seq, 0.000: -> 0, | !(LTLAP13 == true )
pins2lts-seq, 0.000: -> 3, | !(LTLAP13 == true )
pins2lts-seq, 0.000: state 1: non-accepting
pins2lts-seq, 0.000: -> 1, | true
pins2lts-seq, 0.000: -> 2, | !(LTLAP11 == true )
pins2lts-seq, 0.000: state 2: accepting
pins2lts-seq, 0.000: -> 2, | true
pins2lts-seq, 0.000: state 3: non-accepting
pins2lts-seq, 0.000: -> 3, | !(LTLAP13 == true )
pins2lts-seq, 0.000: -> 4, | !(LTLAP13 == true ) && !(LTLAP11 == true )
pins2lts-seq, 0.000: -> 1, | !(LTLAP13 == true ) && !(LTLAP12 == true )
pins2lts-seq, 0.000: -> 2, | !(LTLAP13 == true ) && !(LTLAP12 == true ) && !(LTLAP11 == true )
pins2lts-seq, 0.000: state 4: accepting
pins2lts-seq, 0.000: -> 4, | !(LTLAP13 == true )
pins2lts-seq, 0.000: -> 2, | !(LTLAP13 == true ) && !(LTLAP12 == true )
pins2lts-seq, 0.000: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.000: State length is 23, there are 42 groups
pins2lts-seq, 0.000: Running scc search strategy
pins2lts-seq, 0.000: Using a tree for state storage
pins2lts-seq, 0.001: accepting cycle found!
pins2lts-seq, 0.001: exiting now

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, --when, --ltl, X(X(<>(<>((LTLAP14==true)))))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: LTL layer: formula: X(X(<>(<>((LTLAP14==true)))))
pins2lts-seq, 0.000: Expression is: (X (X (<> (<> (LTLAP14 == true )))))
pins2lts-seq, 0.000: buchi has 3 states
pins2lts-seq, 0.000: state 0: accepting
pins2lts-seq, 0.000: -> 1, | true
pins2lts-seq, 0.000: state 1: accepting
pins2lts-seq, 0.000: -> 2, | true
pins2lts-seq, 0.000: state 2: accepting
pins2lts-seq, 0.000: -> 2, | !(LTLAP14 == true )
pins2lts-seq, 0.000: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.000: State length is 23, there are 33 groups
pins2lts-seq, 0.000: Running scc search strategy
pins2lts-seq, 0.000: Using a tree for state storage
pins2lts-seq, 0.001: state space 3 levels, 5 states 4 transitions

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, -p, --pins-guards, --when, --ltl, (LTLAP15==true)], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: Initializing POR dependencies: labels 52, guards 30
pins2lts-seq, 0.000: LTL layer: formula: (LTLAP15==true)
pins2lts-seq, 0.000: Expression is: (LTLAP15 == true )
pins2lts-seq, 0.000: buchi has 2 states
pins2lts-seq, 0.000: state 0: accepting
pins2lts-seq, 0.000: -> 1, | !(LTLAP15 == true )
pins2lts-seq, 0.000: state 1: accepting
pins2lts-seq, 0.000: -> 1, | true
pins2lts-seq, 0.000: Forcing the use of a cycle proviso. For best results use --proviso=color.
pins2lts-seq, 0.000: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.000: State length is 23, there are 32 groups
pins2lts-seq, 0.000: Running scc search strategy
pins2lts-seq, 0.000: Using a tree for state storage
pins2lts-seq, 0.000: Visible groups: 0 / 32, labels: 1 / 53
pins2lts-seq, 0.000: POR cycle proviso: stack (ltl)
pins2lts-seq, 0.001: accepting cycle found!
pins2lts-seq, 0.001: exiting now

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, --when, --ltl, <>(X([](X((LTLAP16==true)))))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: LTL layer: formula: <>(X([](X((LTLAP16==true)))))
pins2lts-seq, 0.000: Expression is: (<> (X ([] (X (LTLAP16 == true )))))
pins2lts-seq, 0.000: buchi has 4 states
pins2lts-seq, 0.000: state 0: non-accepting
pins2lts-seq, 0.000: -> 1, | true
pins2lts-seq, 0.000: state 1: accepting
pins2lts-seq, 0.000: -> 2, | true
pins2lts-seq, 0.000: state 2: non-accepting
pins2lts-seq, 0.000: -> 2, | true
pins2lts-seq, 0.000: -> 3, | !(LTLAP16 == true )
pins2lts-seq, 0.000: state 3: accepting
pins2lts-seq, 0.000: -> 2, | true
pins2lts-seq, 0.000: -> 3, | !(LTLAP16 == true )
pins2lts-seq, 0.000: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.000: State length is 23, there are 36 groups
pins2lts-seq, 0.000: Running scc search strategy
pins2lts-seq, 0.000: Using a tree for state storage
pins2lts-seq, 0.001: accepting cycle found!
pins2lts-seq, 0.001: exiting now

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, -p, --pins-guards, --when, --ltl, [](<>((LTLAP17==true)))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: Initializing POR dependencies: labels 52, guards 30
pins2lts-seq, 0.000: LTL layer: formula: [](<>((LTLAP17==true)))
pins2lts-seq, 0.000: Expression is: ([] (<> (LTLAP17 == true )))
pins2lts-seq, 0.000: buchi has 2 states
pins2lts-seq, 0.000: state 0: non-accepting
pins2lts-seq, 0.000: -> 0, | true
pins2lts-seq, 0.000: -> 1, | !(LTLAP17 == true )
pins2lts-seq, 0.000: state 1: accepting
pins2lts-seq, 0.000: -> 1, | !(LTLAP17 == true )
pins2lts-seq, 0.000: Forcing the use of a cycle proviso. For best results use --proviso=color.
pins2lts-seq, 0.000: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.000: State length is 23, there are 33 groups
pins2lts-seq, 0.000: Running scc search strategy
pins2lts-seq, 0.000: Using a tree for state storage
pins2lts-seq, 0.000: Visible groups: 0 / 33, labels: 1 / 53
pins2lts-seq, 0.000: POR cycle proviso: stack (ltl)
pins2lts-seq, 0.001: accepting cycle found!
pins2lts-seq, 0.001: exiting now

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, --when, --ltl, [](<>(<>(X((LTLAP8==true)))))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: LTL layer: formula: [](<>(<>(X((LTLAP8==true)))))
pins2lts-seq, 0.000: Expression is: ([] (<> (<> (X (LTLAP8 == true )))))
pins2lts-seq, 0.000: buchi has 2 states
pins2lts-seq, 0.000: state 0: non-accepting
pins2lts-seq, 0.000: -> 0, | true
pins2lts-seq, 0.000: -> 1, | !(LTLAP8 == true )
pins2lts-seq, 0.000: state 1: accepting
pins2lts-seq, 0.000: -> 1, | !(LTLAP8 == true )
pins2lts-seq, 0.000: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.000: State length is 23, there are 33 groups
pins2lts-seq, 0.000: Running scc search strategy
pins2lts-seq, 0.000: Using a tree for state storage
pins2lts-seq, 0.001: accepting cycle found!
pins2lts-seq, 0.001: exiting now

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, -p, --pins-guards, --when, --ltl, (<>([]((LTLAP18==true))))U((LTLAP19==true))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: Initializing POR dependencies: labels 52, guards 30
pins2lts-seq, 0.000: LTL layer: formula: (<>([]((LTLAP18==true))))U((LTLAP19==true))
pins2lts-seq, 0.000: Expression is: ((<> ([] (LTLAP18 == true ))) U (LTLAP19 == true ))
pins2lts-seq, 0.000: buchi has 3 states
pins2lts-seq, 0.000: state 0: accepting
pins2lts-seq, 0.000: -> 0, | !(LTLAP19 == true )
pins2lts-seq, 0.000: -> 1, | !(LTLAP19 == true )
pins2lts-seq, 0.000: state 1: non-accepting
pins2lts-seq, 0.000: -> 2, | !(LTLAP18 == true )
pins2lts-seq, 0.000: -> 1, | true
pins2lts-seq, 0.000: state 2: accepting
pins2lts-seq, 0.000: -> 2, | !(LTLAP18 == true )
pins2lts-seq, 0.000: -> 1, | true
pins2lts-seq, 0.000: Forcing the use of a cycle proviso. For best results use --proviso=color.
pins2lts-seq, 0.000: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.000: State length is 23, there are 36 groups
pins2lts-seq, 0.000: Running scc search strategy
pins2lts-seq, 0.000: Using a tree for state storage
pins2lts-seq, 0.000: Visible groups: 273 / 36, labels: 2 / 53
pins2lts-seq, 0.000: POR cycle proviso: stack (ltl)
pins2lts-seq, 0.001: accepting cycle found!
pins2lts-seq, 0.001: exiting now

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-seq, ./gal.so, --when, --ltl, X(((LTLAP20==true))U(X((LTLAP21==true))))], workingDir=/home/mcc/execution]
pins2lts-seq, 0.000: Registering PINS so language module
pins2lts-seq, 0.000: Loading model from ./gal.so
pins2lts-seq, 0.000: library has no initializer
pins2lts-seq, 0.000: loading model GAL
pins2lts-seq, 0.000: completed loading model GAL
pins2lts-seq, 0.000: LTL layer: formula: X(((LTLAP20==true))U(X((LTLAP21==true))))
pins2lts-seq, 0.000: Expression is: (X ((LTLAP20 == true ) U (X (LTLAP21 == true ))))
pins2lts-seq, 0.000: buchi has 5 states
pins2lts-seq, 0.000: state 0: accepting
pins2lts-seq, 0.000: -> 1, | true
pins2lts-seq, 0.000: state 1: accepting
pins2lts-seq, 0.000: -> 2, | true
pins2lts-seq, 0.000: -> 3, | !(LTLAP20 == true )
pins2lts-seq, 0.000: state 2: accepting
pins2lts-seq, 0.000: -> 2, | !(LTLAP21 == true )
pins2lts-seq, 0.000: -> 3, | !(LTLAP21 == true ) && !(LTLAP20 == true )
pins2lts-seq, 0.000: state 3: accepting
pins2lts-seq, 0.000: -> 4, | !(LTLAP21 == true )
pins2lts-seq, 0.000: state 4: accepting
pins2lts-seq, 0.000: -> 4, | true
pins2lts-seq, 0.000: There are 53 state labels and 1 edge labels
pins2lts-seq, 0.000: State length is 23, there are 37 groups
pins2lts-seq, 0.000: Running scc search strategy
pins2lts-seq, 0.000: Using a tree for state storage
pins2lts-seq, 0.001: accepting cycle found!
pins2lts-seq, 0.001: exiting now

Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.ProcessController forwardStream
WARNING: Stream closed
Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.ProcessController forwardStream
WARNING: Stream closed
Jun 02, 2017 7:41:09 PM fr.lip6.move.gal.itstools.ProcessController$1 run
WARNING: null

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="S_MAPK-PT-320"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/S_MAPK-PT-320.tgz
mv S_MAPK-PT-320 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-3254"
echo " Executing tool itstools"
echo " Input is S_MAPK-PT-320, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r120-blw7-149441651900212"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;