Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.......
=====================================================================
Generated by BenchKit 2-3254
Executing tool itstools
Input is S_Angiogenesis-PT-15, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r090-csrt-149441076400121
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-0
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-1
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-10
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-11
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-12
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-13
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-14
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-15
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-2
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-3
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-4
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-5
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-6
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-7
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-8
FORMULA_NAME Angiogenesis-PT-15-CTLFireability-9

=== Now, execution of the tool begins

BK_START 1496384382172


its-ctl command run as :

/home/mcc/BenchKit/eclipse/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201705302212/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,1.11554e+15,292.039,2428196,2,617019,5,1.35027e+07,6,0,220,1.34791e+07,0


Converting to forward existential form...Done !
original formula: !(E(!(KdStarGStarPgP3>=1) U EF(KdStarGStarPgP3>=1)))
=> equivalent forward existential formula: [(FwdU(FwdU(Init,!(KdStarGStarPgP3>=1)),TRUE) * KdStarGStarPgP3>=1)] = FALSE
Hit Full ! (commute/partial/dont) 58/0/6
(forward)formula 0,0,876.157,6914060,1,0,9,3.9097e+07,9,1,910,3.80792e+07,2
FORMULA Angiogenesis-PT-15-CTLFireability-0 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !

***************************************

original formula: ((!(KdStarGStarPg>=1) + KdStarGStarP3>=1) * (AG(EF(AktP3>=1)) * !((GStarP3kP3>=1 * KdStar>=1))))
=> equivalent forward existential formula: ([(Init * !((!(KdStarGStarPg>=1) + KdStarGStarP3>=1)))] = FALSE * ([(FwdU(Init,TRUE) * !(E(TRUE U AktP3>=1)))] = FALSE * [(Init * (GStarP3kP3>=1 * KdStar>=1))] = FALSE))
(forward)formula 1,0,2241.2,13642784,1,0,80,7.4709e+07,14,52,1235,6.28168e+07,6
FORMULA Angiogenesis-PT-15-CTLFireability-1 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Formula is FALSE !
Exit code :137

BK_STOP 1496387329572

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ CTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt
+ ulimit -s 65536
+ java -Dosgi.requiredJavaVersion=1.6 -Xss8m -Xms40m -Xmx8192m -Declipse.pde.launch=true -Dfile.encoding=UTF-8 -classpath /home/mcc/BenchKit//eclipse/plugins/org.eclipse.equinox.launcher_1.3.201.v20161025-1711.jar org.eclipse.equinox.launcher.Main -application fr.lip6.move.gal.application.pnmcc -data /home/mcc/BenchKit//workspace -os linux -ws gtk -arch x86_64 -nl en_US -consoleLog -pnfolder /home/mcc/execution -examination CTLFireability -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt
Jun 02, 2017 6:19:43 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 02, 2017 6:19:43 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 49 ms
Jun 02, 2017 6:19:43 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 39 places.
Jun 02, 2017 6:19:43 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 64 transitions.
Jun 02, 2017 6:19:44 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 31 ms
Jun 02, 2017 6:19:44 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 9 ms
Jun 02, 2017 6:19:44 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 1 ms
Jun 02, 2017 7:08:49 AM fr.lip6.move.gal.itstools.Runner runTool
INFO: Standard error output from running tool CommandLine [args=[/home/mcc/BenchKit/eclipse/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201705302212/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]
Reverse transition relation is NOT exact ! Due to transitions k2, k55, k60, k7, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :0/60/4/64

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="S_Angiogenesis-PT-15"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/S_Angiogenesis-PT-15.tgz
mv S_Angiogenesis-PT-15 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-3254"
echo " Executing tool itstools"
echo " Input is S_Angiogenesis-PT-15, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r090-csrt-149441076400121"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;