Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......
=====================================================================
Generated by BenchKit 2-3254
Executing tool marcie
Input is MAPK-PT-320, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r031-blw7-149440473900214
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-0
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-1
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-10
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-11
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-12
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-13
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-14
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-15
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-2
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-3
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-4
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-5
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-6
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-7
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-8
FORMULA_NAME MAPK-PT-320-ReachabilityCardinality-9

=== Now, execution of the tool begins

BK_START 1494458050232

timeout --kill-after=10s --signal=SIGINT 1m for testing only

Marcie rev. 8852M (built: crohr on 2017-05-03)
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: marcie --net-file=model.pnml --mcc-file=ReachabilityCardinality.xml --memory=6

parse successfull
net created successfully

Net: MAPK_PT_320
(NrP: 22 NrTr: 30 NrArc: 90)

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.000sec

net check time: 0m 0.000sec

init dd package: 0m 1.090sec

parse successfull
net created successfully

Net: MAPK_PT_320
(NrP: 22 NrTr: 30 NrArc: 90)

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.000sec

net check time: 0m 0.000sec

init dd package: 0m 3.475sec


RS generation: 1m21.157sec


-> reachability set: #nodes 174862 (1.7e+05) #states 2,616,258,717,809,759,012,724,668,961 (27)



starting MCC model checker
--------------------------

checking: AG [1<=RasGTP]
normalized: ~ [E [true U ~ [1<=RasGTP]]]

abstracting: (1<=RasGTP)
states: 2,593,600,845,118,981,060,248,548,280 (27)
MC time: 3m40.629sec

checking: AG [3<=RasGTP]
normalized: ~ [E [true U ~ [3<=RasGTP]]]

abstracting: (3<=RasGTP)
states: 2,547,623,106,008,789,392,928,722,563 (27)

FORMULA MAPK-PT-320-ReachabilityCardinality-2 CANNOT_COMPUTE

MC time: 0m44.215sec

checking: EF [2<=MEKPP_Phase2]
normalized: E [true U 2<=MEKPP_Phase2]

abstracting: (2<=MEKPP_Phase2)

FORMULA MAPK-PT-320-ReachabilityCardinality-9 CANNOT_COMPUTE

MC time: 0m 0.003sec

checking: AG [~ [3<=ERKPP_Phase3]]
normalized: ~ [E [true U 3<=ERKPP_Phase3]]

abstracting: (3<=ERKPP_Phase3)

FORMULA MAPK-PT-320-ReachabilityCardinality-10 CANNOT_COMPUTE

MC time: 0m 0.000sec

checking: EF [~ [Raf_RasGTP<=Raf]]
normalized: E [true U ~ [Raf_RasGTP<=Raf]]

abstracting: (Raf_RasGTP<=Raf)

before gc: list nodes free: 22

after gc: idd nodes used:477328, unused:63522672; list nodes free:531931553
states: 1,918,069,882,854,910,782,452,072,316 (27)
MC time: 4m10.287sec

checking: EF [[3<=MEKPP & 1<=Phase3]]
normalized: E [true U [3<=MEKPP & 1<=Phase3]]

abstracting: (1<=Phase3)
states: 2,616,258,703,212,951,710,091,561,468 (27)
abstracting: (3<=MEKPP)
states: 2,294,300,091,866,106,179,606,705,820 (27)

BK_STOP 1494458924564

--------------------
content from stderr:

check for maximal unmarked siphon
ok
check for constant places
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok

ptnet_zbdd.cc:255: Boundedness exception: net is not 1-bounded!

check for maximal unmarked siphon
ok
check for constant places
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m 0.000sec


iterations count:41790 (1393), effective:6880 (229)

initing FirstDep: 0m 0.000sec


sat_reach.icc:155: Timeout: after 219 sec

std::bad_alloc

std::bad_alloc

std::bad_alloc


sat_reach.icc:155: Timeout: after 249 sec


sat_reach.icc:155: Timeout: after 230 sec

/home/mcc/BenchKit/BenchKit_head.sh: line 15: 313 Killed ${MARCIE} --net-file=model.pnml --mcc-file=${BK_EXAMINATION}.xml ${MARCIE_CONFIG}

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPK-PT-320"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="marcie"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/MAPK-PT-320.tgz
mv MAPK-PT-320 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-3254"
echo " Executing tool marcie"
echo " Input is MAPK-PT-320, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r031-blw7-149440473900214"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;