fond

jQuery Multi Level CSS Menu Css3Menu.com

Model Checking Contest @ Petri Nets 2017
7th edition, Zaragoza, Spain, June 27, 2017
Execution of r028-blw3-149440264500558
Last Updated
June 27, 2017

About the Execution of LoLA for GPPP-PT-C0100N0000010000

Execution Summary
Max Memory
Used (MB)		 Time wait (ms) CPU Usage (ms) I/O Wait (ms) Computed Result Execution
Status
15951.380 680891.00 1122480.00 15757.70 FTTFF?TTTTTTT?TT normal

Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......
=====================================================================
Generated by BenchKit 2-3254
Executing tool lola
Input is GPPP-PT-C0100N0000010000, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r028-blw3-149440264500558
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-0
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-1
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-10
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-11
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-12
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-13
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-14
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-15
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-2
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-3
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-4
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-5
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-6
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-7
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-8
FORMULA_NAME GPPP-PT-C0100N0000010000-ReachabilityFireability-9

=== Now, execution of the tool begins

BK_START 1494723397332


Time: 3600 - MCC
----- Start make prepare stdout -----
checking for too many tokens
----- Start make result stdout -----
ReachabilityFireability @ GPPP-PT-C0100N0000010000 @ 3540 seconds
----- Start make result stdout -----
lola: LoLA will run for 3540 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 55/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: finding significant places
lola: 33 places, 22 transitions, 21 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 30 transition conflict sets
lola: TASK
lola: reading formula from GPPP-PT-C0100N0000010000-ReachabilityFireability.task
lola: A (G (((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Phosphofructokinase)) OR (FIREABLE(Transketolase2) AND FIREABLE(Phosphoglucose_isomerase)) OR NOT FIREABLE(Hexokinase) OR NOT FIREABLE(Phosphoglycerate_mutase) OR (FIREABLE(TIM_backward) AND FIREABLE(remove) AND (FIREABLE(Phosphoglucose_isomerase) OR FIREABLE(Ru5P_epimerase)) AND FIREABLE(Aldolase) AND FIREABLE(Transketolase2) AND NOT FIREABLE(G6P_dehydrogenase))))) : E (F (((FIREABLE(Hexokinase) OR FIREABLE(Phosphoglucose_isomerase) OR FIREABLE(Hexokinase)) AND ((FIREABLE(Transketolase2) AND FIREABLE(Pyruvate_kinase)) OR (FIREABLE(TIM_backward) AND FIREABLE(Phosphoglucose_isomerase))) AND NOT FIREABLE(Hexokinase) AND FIREABLE(Phosphofructokinase) AND NOT FIREABLE(Pyruvate_kinase) AND NOT FIREABLE(Aldolase)))) : E (F (FIREABLE(Phosphoglycerate_mutase))) : E (F (FIREABLE(Phosphoglycerate_mutase))) : E (F (FIREABLE(Enolase))) : E (F (FIREABLE(Phosphoglycerate_mutase))) : E (F (FIREABLE(Phosphoglycerate_mutase))) : E (F (((NOT FIREABLE(Phosphoglucose_isomerase) OR NOT FIREABLE(remove) OR (NOT FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(GAP_dehydrogenase))) AND FIREABLE(remove)))) : E (F (FIREABLE(Lactate_dehydrogenase))) : E (F ((FIREABLE(Aldolase) AND NOT FIREABLE(Lactate_dehydrogenase) AND (FIREABLE(Phosphoglucose_isomerase) OR (NOT FIREABLE(Aldolase) AND NOT FIREABLE(Phosphoglucose_isomerase)))))) : E (F (FIREABLE(Enolase))) : A (G ((NOT FIREABLE(Glutathione_reductose) OR FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Enolase)))) : A (G ((NOT FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Transketolase1) OR NOT FIREABLE(Transketolase1) OR NOT FIREABLE(Phosphoglucose_isomerase) OR (FIREABLE(TIM_backward) AND NOT FIREABLE(Transketolase2))))) : E (F (((FIREABLE(Phosphoglycerate_kinase) OR FIREABLE(Transketolase2)) AND FIREABLE(Ru5P_epimerase) AND FIREABLE(Phosphoglycerate_mutase) AND ((FIREABLE(G6P_dehydrogenase) AND FIREABLE(remove) AND (FIREABLE(Lactate_dehydrogenase))) OR (FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(Transaldolase) AND FIREABLE(Glutathione_oxidation)))))) : E (F ((FIREABLE(Transaldolase) AND NOT FIREABLE(Glutathione_reductose)))) : A (G (()))
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Phosphofructokinase)) OR (FIREABLE(Transketolase2) AND FIREABLE(Phosphoglucose_isomerase)) OR NOT FIREABLE(Hexokinase) OR NOT FIREABLE(Phosphoglycerate_mutase) OR (FIREABLE(TIM_backward) AND FIREABLE(remove) AND (FIREABLE(Phosphoglucose_isomerase) OR FIREABLE(Ru5P_epimerase)) AND FIREABLE(Aldolase) AND FIREABLE(Transketolase2) AND NOT FIREA... (shortened)
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: ========================================
lola: subprocess 1 will run for 236 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((FIREABLE(Hexokinase) OR FIREABLE(Phosphoglucose_isomerase) OR FIREABLE(Hexokinase)) AND ((FIREABLE(Transketolase2) AND FIREABLE(Pyruvate_kinase)) OR (FIREABLE(TIM_backward) AND FIREABLE(Phosphoglucose_isomerase))) AND NOT FIREABLE(Hexokinase) AND FIREABLE(Phosphofructokinase) AND NOT FIREABLE(Pyruvate_kinase) AND NOT FIREABLE(Aldolase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 20 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 2 will run for 252 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Phosphoglycerate_mutase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-2.sara
lola: ========================================
lola: subprocess 3 will run for 272 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Phosphoglycerate_mutase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-3.sara
lola: ========================================
lola: subprocess 4 will run for 295 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Enolase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-4.sara
lola: ========================================
lola: subprocess 5 will run for 321 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Phosphoglycerate_mutase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-5.sara
lola: ========================================
lola: subprocess 6 will run for 354 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Phosphoglycerate_mutase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-6.sara
lola: ========================================
lola: subprocess 7 will run for 393 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((NOT FIREABLE(Phosphoglucose_isomerase) OR NOT FIREABLE(remove) OR (NOT FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(GAP_dehydrogenase))) AND FIREABLE(remove))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 44 literals and 12 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-7.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000010000-ReachabilityFireability-7.sara.
sara: place or transition ordering is non-deterministic
lola: sara is running 0 secs || 4288106 markings, 7742627 edges, 857621 markings/sec, 0 secs
lola: sara is running 5 secs || 8410145 markings, 15207031 edges, 824408 markings/sec, 5 secs
lola: sara is running 10 secs || 12567549 markings, 22736258 edges, 831481 markings/sec, 10 secs
lola: sara is running 15 secs || 16705150 markings, 29887033 edges, 827520 markings/sec, 15 secs
lola: sara is running 20 secs || 20724622 markings, 36747701 edges, 803894 markings/sec, 20 secs
lola: sara is running 25 secs || 24635116 markings, 43406690 edges, 782099 markings/sec, 25 secs
lola: sara is running 30 secs || 28742462 markings, 50216658 edges, 821469 markings/sec, 30 secs
lola: sara is running 35 secs || 32614031 markings, 56890590 edges, 774314 markings/sec, 35 secs
lola: sara is running 40 secs || 36589192 markings, 64090736 edges, 795032 markings/sec, 40 secs
lola: sara is running 45 secs || 40725859 markings, 71583993 edges, 827333 markings/sec, 45 secs
lola: sara is running 50 secs || 44915990 markings, 79174686 edges, 838026 markings/sec, 50 secs
lola: sara is running 55 secs || 49015438 markings, 86601682 edges, 819890 markings/sec, 55 secs
lola: sara is running 60 secs || 53215328 markings, 93677233 edges, 839978 markings/sec, 60 secs
lola: sara is running 65 secs || 57469238 markings, 100243179 edges, 850782 markings/sec, 65 secs
lola: sara is running 70 secs || 61614503 markings, 106631307 edges, 829053 markings/sec, 70 secs
lola: sara is running 75 secs || 65775862 markings, 113046088 edges, 832272 markings/sec, 75 secs
lola: sara is running 80 secs || 69691650 markings, 119714495 edges, 783158 markings/sec, 80 secs
lola: sara is running 85 secs || 72886354 markings, 126006796 edges, 638941 markings/sec, 85 secs
lola: sara is running 90 secs || 76614030 markings, 132357158 edges, 745535 markings/sec, 90 secs
lola: sara is running 95 secs || 80461606 markings, 138913747 edges, 769515 markings/sec, 95 secs
lola: sara is running 100 secs || 84363543 markings, 145564569 edges, 780387 markings/sec, 100 secs
lola: sara is running 105 secs || 88045444 markings, 151841984 edges, 736380 markings/sec, 105 secs
lola: sara is running 110 secs || 91807141 markings, 158257115 edges, 752339 markings/sec, 110 secs
lola: sara is running 115 secs || 95500860 markings, 164258098 edges, 738744 markings/sec, 115 secs
lola: sara is running 120 secs || 98724802 markings, 169428065 edges, 644788 markings/sec, 120 secs
lola: sara is running 125 secs || 102328173 markings, 175127887 edges, 720674 markings/sec, 125 secs
lola: sara is running 130 secs || 106506725 markings, 181394090 edges, 835710 markings/sec, 130 secs
lola: sara is running 135 secs || 110547775 markings, 187458441 edges, 808210 markings/sec, 135 secs
lola: sara is running 140 secs || 114617718 markings, 193566170 edges, 813989 markings/sec, 140 secs
lola: sara is running 145 secs || 118599410 markings, 199541435 edges, 796338 markings/sec, 145 secs
lola: sara is running 150 secs || 122342459 markings, 205390193 edges, 748610 markings/sec, 150 secs
lola: sara is running 155 secs || 125783730 markings, 210902670 edges, 688254 markings/sec, 155 secs
lola: sara is running 160 secs || 129458126 markings, 216645831 edges, 734879 markings/sec, 160 secs
lola: sara is running 165 secs || 133222049 markings, 222451564 edges, 752785 markings/sec, 165 secs
lola: sara is running 170 secs || 137084995 markings, 228411706 edges, 772589 markings/sec, 170 secs
lola: sara is running 175 secs || 140995426 markings, 234446681 edges, 782086 markings/sec, 175 secs
lola: sara is running 180 secs || 144959889 markings, 240566468 edges, 792893 markings/sec, 180 secs
lola: sara is running 185 secs || 149059049 markings, 246896565 edges, 819832 markings/sec, 185 secs
lola: sara is running 190 secs || 153155223 markings, 253272268 edges, 819235 markings/sec, 190 secs
lola: sara is running 195 secs || 156388307 markings, 259750707 edges, 646617 markings/sec, 195 secs
lola: sara is running 200 secs || 159323882 markings, 265630770 edges, 587115 markings/sec, 200 secs
lola: sara is running 205 secs || 162285573 markings, 271562861 edges, 592338 markings/sec, 205 secs
lola: sara is running 210 secs || 165834784 markings, 277899927 edges, 709842 markings/sec, 210 secs
lola: sara is running 215 secs || 169398627 markings, 283615111 edges, 712769 markings/sec, 215 secs
lola: sara is running 220 secs || 173158370 markings, 289682614 edges, 751949 markings/sec, 220 secs
lola: sara is running 225 secs || 177036715 markings, 296676939 edges, 775669 markings/sec, 225 secs
lola: sara is running 230 secs || 180601686 markings, 303113663 edges, 712994 markings/sec, 230 secs
lola: sara is running 235 secs || 181881483 markings, 305419915 edges, 255959 markings/sec, 235 secs
lola: sara is running 240 secs || 181886929 markings, 305430825 edges, 1089 markings/sec, 240 secs
lola: sara is running 245 secs || 181893831 markings, 305444645 edges, 1380 markings/sec, 245 secs
lola: sara is running 250 secs || 181910515 markings, 305478041 edges, 3337 markings/sec, 250 secs
lola: sara is running 255 secs || 181910622 markings, 305478257 edges, 21 markings/sec, 255 secs
lola: sara is running 260 secs || 181910711 markings, 305478436 edges, 18 markings/sec, 260 secs
lola: sara is running 265 secs || 181942109 markings, 305535652 edges, 6280 markings/sec, 265 secs
lola: sara is running 270 secs || 181973275 markings, 305585579 edges, 6233 markings/sec, 270 secs
lola: sara is running 275 secs || 181980290 markings, 305598665 edges, 1403 markings/sec, 275 secs
lola: sara is running 280 secs || 181993809 markings, 305625563 edges, 2704 markings/sec, 280 secs
lola: sara is running 285 secs || 182010064 markings, 305655390 edges, 3251 markings/sec, 285 secs
lola: sara is running 290 secs || 182011830 markings, 305658225 edges, 353 markings/sec, 290 secs
lola: sara is running 295 secs || 182079473 markings, 305777540 edges, 13529 markings/sec, 295 secs
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 8 will run for 404 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Lactate_dehydrogenase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: subprocess 9 will run for 462 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Aldolase) AND NOT FIREABLE(Lactate_dehydrogenase) AND (FIREABLE(Phosphoglucose_isomerase) OR (NOT FIREABLE(Aldolase) AND NOT FIREABLE(Phosphoglucose_isomerase))))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 8 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-9.sara
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-8.sara
lola: state equation: calling and running sara
lola: state equation: calling and running sara
lola: ========================================
sara: try reading problem file GPPP-PT-C0100N0000010000-ReachabilityFireability-9.sara.
sara: try reading problem file GPPP-PT-C0100N0000010000-ReachabilityFireability-8.sara.
sara: place or transition ordering is non-deterministic
sara: place or transition ordering is non-deterministic


lola: state equation: solution produced
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 10 will run for 539 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Enolase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-10.sara
lola: The predicate is reachable.
lola: lola: ========================================
lola: subprocess 11 will run for 646 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Glutathione_reductose) OR FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Enolase))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: state equation: calling and running sara
Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 12 literals and 3 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-11.sara
lola: subprocess 12 will run for 808 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: lola: ...considering subproblem: A (G ((NOT FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Transketolase1) OR NOT FIREABLE(Transketolase1) OR NOT FIREABLE(Phosphoglucose_isomerase) OR (FIREABLE(TIM_backward) AND NOT FIREABLE(Transketolase2)))))========================================

lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: state equation: calling and running sara
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: sara: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)try reading problem file GPPP-PT-C0100N0000010000-ReachabilityFireability-10.sara.

lola: RUNNING
lola: state equation: Generated DNF with 19 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-12.sara
sara: try reading problem file GPPP-PT-C0100N0000010000-ReachabilityFireability-11.sara.
sara: place or transition ordering is non-deterministic
sara: place or transition ordering is non-deterministic

lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000010000-ReachabilityFireability-12.sara.
sara: place or transition ordering is non-deterministic

lola: state equation: solution produced
lola: SUBRESULT
lola: result: no
lola: produced by: state equation
lola: The predicate is not invariant.
lola: ========================================
lola: subprocess 13 will run for 1078 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((FIREABLE(Phosphoglycerate_kinase) OR FIREABLE(Transketolase2)) AND FIREABLE(Ru5P_epimerase) AND FIREABLE(Phosphoglycerate_mutase) AND ((FIREABLE(G6P_dehydrogenase) AND FIREABLE(remove) AND (FIREABLE(Lactate_dehydrogenase))) OR (FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(Transaldolase) AND FIREABLE(Glutathione_oxidation))))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 46 literals and 4 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-ReachabilityFireability-13.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000010000-ReachabilityFireability-13.sara.
sara: place or transition ordering is non-deterministic

lola: sara is running 0 secs || 3073905 markings, 8177467 edges, 614781 markings/sec, 0 secs
lola: sara is running 5 secs || 6062772 markings, 16028786 edges, 597773 markings/sec, 5 secs
lola: sara is running 10 secs || 9074282 markings, 23860753 edges, 602302 markings/sec, 10 secs
lola: sara is running 15 secs || 12088719 markings, 31674133 edges, 602887 markings/sec, 15 secs
lola: sara is running 20 secs || 15147286 markings, 39533561 edges, 611713 markings/sec, 20 secs
lola: sara is running 25 secs || 18217472 markings, 47413313 edges, 614037 markings/sec, 25 secs
lola: sara is running 30 secs || 21291217 markings, 55288875 edges, 614749 markings/sec, 30 secs
lola: sara is running 35 secs || 24406475 markings, 63216358 edges, 623052 markings/sec, 35 secs
lola: sara is running 40 secs || 27518762 markings, 71143083 edges, 622457 markings/sec, 40 secs
lola: sara is running 45 secs || 30608872 markings, 78998231 edges, 618022 markings/sec, 45 secs
lola: sara is running 50 secs || 33720485 markings, 86893097 edges, 622323 markings/sec, 50 secs
lola: sara is running 55 secs || 36789481 markings, 94670773 edges, 613799 markings/sec, 55 secs
lola: sara is running 60 secs || 39864459 markings, 102409247 edges, 614996 markings/sec, 60 secs
lola: sara is running 65 secs || 42921934 markings, 110078283 edges, 611495 markings/sec, 65 secs
lola: sara is running 70 secs || 45997686 markings, 117718211 edges, 615150 markings/sec, 70 secs
lola: sara is running 75 secs || 49262870 markings, 126090407 edges, 653037 markings/sec, 75 secs
lola: sara is running 80 secs || 52537311 markings, 134473649 edges, 654888 markings/sec, 80 secs
lola: sara is running 85 secs || 55762944 markings, 142747067 edges, 645127 markings/sec, 85 secs
lola: sara is running 90 secs || 58966356 markings, 150947091 edges, 640682 markings/sec, 90 secs
lola: sara is running 95 secs || 62179323 markings, 159188786 edges, 642593 markings/sec, 95 secs
lola: sara is running 100 secs || 65383106 markings, 167392254 edges, 640757 markings/sec, 100 secs
lola: sara is running 105 secs || 68591693 markings, 175620200 edges, 641717 markings/sec, 105 secs
lola: sara is running 110 secs || 71791289 markings, 183816412 edges, 639919 markings/sec, 110 secs
lola: sara is running 115 secs || 74983438 markings, 191998519 edges, 638430 markings/sec, 115 secs
lola: sara is running 120 secs || 78158660 markings, 200132889 edges, 635044 markings/sec, 120 secs
lola: sara is running 125 secs || 81320588 markings, 208237549 edges, 632386 markings/sec, 125 secs
lola: sara is running 130 secs || 84466932 markings, 216294384 edges, 629269 markings/sec, 130 secs
lola: sara is running 135 secs || 87620028 markings, 224379905 edges, 630619 markings/sec, 135 secs
lola: sara is running 140 secs || 90894945 markings, 232768677 edges, 654983 markings/sec, 140 secs
lola: sara is running 145 secs || 94142685 markings, 241091942 edges, 649548 markings/sec, 145 secs
lola: sara is running 150 secs || 97348613 markings, 249306930 edges, 641186 markings/sec, 150 secs
lola: sara is running 155 secs || 100579009 markings, 257583273 edges, 646079 markings/sec, 155 secs
lola: sara is running 160 secs || 103752453 markings, 265715833 edges, 634689 markings/sec, 160 secs
lola: sara is running 165 secs || 106888647 markings, 273751298 edges, 627239 markings/sec, 165 secs
lola: sara is running 170 secs || 110097560 markings, 281972652 edges, 641783 markings/sec, 170 secs
lola: sara is running 175 secs || 113288168 markings, 290148330 edges, 638122 markings/sec, 175 secs
lola: sara is running 180 secs || 116451349 markings, 298250838 edges, 632636 markings/sec, 180 secs
lola: sara is running 185 secs || 119596124 markings, 306311667 edges, 628955 markings/sec, 185 secs
lola: sara is running 190 secs || 122723752 markings, 314317261 edges, 625526 markings/sec, 190 secs
lola: sara is running 195 secs || 125874891 markings, 322399706 edges, 630228 markings/sec, 195 secs
lola: sara is running 200 secs || 129022365 markings, 330457515 edges, 629495 markings/sec, 200 secs
lola: sara is running 205 secs || 132252375 markings, 338739814 edges, 646002 markings/sec, 205 secs
lola: sara is running 210 secs || 135428881 markings, 346871272 edges, 635301 markings/sec, 210 secs
lola: sara is running 215 secs || 138587177 markings, 354970405 edges, 631659 markings/sec, 215 secs
lola: sara is running 220 secs || 141756423 markings, 363084503 edges, 633849 markings/sec, 220 secs
lola: sara is running 225 secs || 144899509 markings, 371142462 edges, 628617 markings/sec, 225 secs
lola: sara is running 230 secs || 147996966 markings, 379075761 edges, 619491 markings/sec, 230 secs
lola: sara is running 235 secs || 151162422 markings, 387185162 edges, 633091 markings/sec, 235 secs
lola: sara is running 240 secs || 154310029 markings, 395250871 edges, 629521 markings/sec, 240 secs
lola: sara is running 245 secs || 157415903 markings, 403200567 edges, 621175 markings/sec, 245 secs
lola: sara is running 250 secs || 160533063 markings, 411195498 edges, 623432 markings/sec, 250 secs
lola: sara is running 255 secs || 163620267 markings, 419099698 edges, 617441 markings/sec, 255 secs
lola: sara is running 260 secs || 166727922 markings, 427065059 edges, 621531 markings/sec, 260 secs
lola: sara is running 265 secs || 169776814 markings, 434940530 edges, 609778 markings/sec, 265 secs
lola: sara is running 270 secs || 172544236 markings, 442494070 edges, 553484 markings/sec, 270 secs
lola: sara is running 275 secs || 175348055 markings, 449986642 edges, 560764 markings/sec, 275 secs
lola: sara is running 280 secs || 178163948 markings, 457471688 edges, 563179 markings/sec, 280 secs
lola: sara is running 285 secs || 180975025 markings, 464927755 edges, 562215 markings/sec, 285 secs
lola: sara is running 290 secs || 183794618 markings, 472390762 edges, 563919 markings/sec, 290 secs
lola: sara is running 295 secs || 186595419 markings, 479828108 edges, 560160 markings/sec, 295 secs
lola: sara is running 300 secs || 188232939 markings, 484107984 edges, 327504 markings/sec, 300 secs
lola: sara is running 305 secs || 188235799 markings, 484115619 edges, 572 markings/sec, 305 secs
lola: sara is running 310 secs || 188246950 markings, 484145278 edges, 2230 markings/sec, 310 secs
lola: sara is running 315 secs || 188256127 markings, 484168827 edges, 1835 markings/sec, 315 secs
lola: sara is running 320 secs || 188256225 markings, 484169056 edges, 20 markings/sec, 320 secs
lola: sara is running 325 secs || 188256302 markings, 484169241 edges, 15 markings/sec, 325 secs
lola: sara is running 330 secs || 188256412 markings, 484169512 edges, 22 markings/sec, 330 secs
lola: sara is running 335 secs || 188261343 markings, 484182546 edges, 986 markings/sec, 335 secs
lola: sara is running 340 secs || 188315792 markings, 484326334 edges, 10890 markings/sec, 340 secs
lola: sara is running 345 secs || 188315870 markings, 484326560 edges, 16 markings/sec, 345 secs
lola: sara is running 350 secs || 188335431 markings, 484378194 edges, 3912 markings/sec, 350 secs
lola: sara is running 355 secs || 188335525 markings, 484378420 edges, 19 markings/sec, 355 secs
lola: sara is running 360 secs || 188381248 markings, 484499167 edges, 9145 markings/sec, 360 secs
lola: sara is running 365 secs || 188394124 markings, 484533193 edges, 2575 markings/sec, 365 secs
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 14 will run for 1429 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Transaldolase) AND NOT FIREABLE(Glutathione_reductose))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 8 literals and 2 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 15 will run for 2859 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (()))
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: TRUE
lola: processed formula length: 4
lola: 3 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C0100N0000010000-ReachabilityFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: preprocessing
lola: The net satisfies the property already in its initial state.
lola: ========================================
lola: RESULT
lola:
SUMMARY: no yes yes yes yes yes yes unknown yes yes yes no no unknown yes yes
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-0 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-1 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-2 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-3 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-4 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-5 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-6 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-7 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-8 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-9 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-10 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-11 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-12 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-13 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-14 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000010000-ReachabilityFireability-15 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
----- Kill lola and sara stdout -----
----- Finished stdout -----

BK_STOP 1494724078223

--------------------
content from stderr:

----- Start make prepare stderr -----
----- Start make result stderr -----
----- Start make result stderr -----
----- Kill lola and sara stderr -----
----- Finished stderr -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0100N0000010000"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="lola"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0100N0000010000.tgz
mv GPPP-PT-C0100N0000010000 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-3254"
echo " Executing tool lola"
echo " Input is GPPP-PT-C0100N0000010000, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r028-blw3-149440264500558"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;