About the Execution of LoLA for GPPP-PT-C0100N0000000100
Execution Summary | |||||
Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
15952.710 | 669654.00 | 1152466.00 | 11206.30 | TFT?TTTTFTFFFTTF | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Waiting for the VM to be ready (probing ssh)
......
=====================================================================
Generated by BenchKit 2-3254
Executing tool lola
Input is GPPP-PT-C0100N0000000100, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r028-blw3-149440264400540
=====================================================================
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-0
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-1
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-10
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-11
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-12
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-13
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-14
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-15
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-2
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-3
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-4
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-5
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-6
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-7
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-8
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-9
=== Now, execution of the tool begins
BK_START 1494721104290
Time: 3600 - MCC
----- Start make prepare stdout -----
checking for too many tokens
----- Start make result stdout -----
ReachabilityFireability @ GPPP-PT-C0100N0000000100 @ 3540 seconds
----- Start make result stdout -----
lola: LoLA will run for 3540 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 55/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: finding significant places
lola: 33 places, 22 transitions, 21 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 30 transition conflict sets
lola: TASK
lola: reading formula from GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: E (F (FIREABLE(Lactate_dehydrogenase))) : A (G (((NOT FIREABLE(Glutathione_reductose) AND NOT FIREABLE(Hexokinase) AND NOT FIREABLE(Phosphoglycerate_kinase)) OR ((NOT FIREABLE(Lactate_dehydrogenase) OR NOT FIREABLE(Phosphoglycerate_kinase)) AND NOT FIREABLE(Pyruvate_kinase))))) : A (G (NOT FIREABLE(Transketolase2))) : E (F (FIREABLE(Pyruvate_kinase))) : E (F ((NOT FIREABLE(Aldolase) AND FIREABLE(remove)))) : A (G (((FIREABLE(Aldolase)) AND NOT FIREABLE(remove)))) : A (G ((((NOT FIREABLE(Enolase) OR NOT FIREABLE(TIM_forward)) AND FIREABLE(Transketolase1)) OR ((NOT FIREABLE(Aldolase) OR NOT FIREABLE(Phosphoglycerate_mutase)) AND (NOT FIREABLE(TIM_backward) OR NOT FIREABLE(generate)))))) : E (F (FIREABLE(Phosphoglycerate_mutase))) : E (F ((((NOT FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Ru5P_isomerase)) OR ((FIREABLE(Glutathione_oxidation) OR FIREABLE(Transketolase2)) AND NOT FIREABLE(Phosphoglycerate_mutase))) AND ((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Transaldolase)) OR (FIREABLE(remove) AND FIREABLE(Lactate_dehydrogenase)))))) : A (G (((FIREABLE(Transaldolase) AND FIREABLE(remove) AND FIREABLE(Glutathione_reductose) AND FIREABLE(Phosphofructokinase)) OR (NOT FIREABLE(Glutathione_reductose) AND NOT FIREABLE(Phosphoglycerate_mutase)) OR FIREABLE(Glutathione_reductose)))) : E (F ((FIREABLE(Aldolase) AND FIREABLE(Enolase) AND NOT FIREABLE(TIM_backward) AND (NOT FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(GAP_dehydrogenase))))) : E (F ((FIREABLE(Phosphoclucose_isomerase) AND FIREABLE(Transaldolase) AND FIREABLE(Aldolase) AND ((FIREABLE(remove) AND FIREABLE(Phosphoglycerate_kinase)) OR (FIREABLE(Enolase) AND FIREABLE(TIM_forward))) AND (FIREABLE(generate) OR FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Enolase))))) : E (F ((NOT FIREABLE(Hexokinase) AND FIREABLE(Phosphofructokinase)))) : E (F (FIREABLE(Enolase))) : A (G ((NOT FIREABLE(Transaldolase) OR NOT FIREABLE(GAP_dehydrogenase)))) : E (F (FIREABLE(Phosphoglycerate_mutase)))
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Lactate_dehydrogenase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 1 will run for 236 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((NOT FIREABLE(Glutathione_reductose) AND NOT FIREABLE(Hexokinase) AND NOT FIREABLE(Phosphoglycerate_kinase)) OR ((NOT FIREABLE(Lactate_dehydrogenase) OR NOT FIREABLE(Phosphoglycerate_kinase)) AND NOT FIREABLE(Pyruvate_kinase)))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 30 literals and 6 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability.sara
lola: ========================================
lola: subprocess 2 will run for 252 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (NOT FIREABLE(Transketolase2)))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-2.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: lola: ========================================state equation: calling and running sara
lola: subprocess 3 will run for 272 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Pyruvate_kinase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-3.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 4 will run for 295 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((NOT FIREABLE(Aldolase) AND FIREABLE(remove))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 3 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-4.sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-2.sara.
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-4.sara.
sara: place or transition ordering is non-deterministic
sara: place or transition ordering is non-deterministic
lola: state equation: solution impossible
lola: SUBRESULT
lola: result: no
lola: produced by: state equation
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 5 will run for 321 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((FIREABLE(Aldolase)) AND NOT FIREABLE(remove))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 3 literals and 2 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: ========================================
lola: subprocess 6 will run for 354 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((((NOT FIREABLE(Enolase) OR NOT FIREABLE(TIM_forward)) AND FIREABLE(Transketolase1)) OR ((NOT FIREABLE(Aldolase) OR NOT FIREABLE(Phosphoglycerate_mutase)) AND (NOT FIREABLE(TIM_backward) OR NOT FIREABLE(generate))))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 20 literals and 6 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-6.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: ========================================
lola: subprocess 7 will run for 393 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Phosphoglycerate_mutase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-7.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 8 will run for 442 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((((NOT FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Ru5P_isomerase)) OR ((FIREABLE(Glutathione_oxidation) OR FIREABLE(Transketolase2)) AND NOT FIREABLE(Phosphoglycerate_mutase))) AND ((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Transaldolase)) OR (FIREABLE(remove) AND FIREABLE(Lactate_dehydrogenase))))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 100 literals and 16 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-8.sara
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 9 will run for 505 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (((FIREABLE(Transaldolase) AND FIREABLE(remove) AND FIREABLE(Glutathione_reductose) AND FIREABLE(Phosphofructokinase)) OR (NOT FIREABLE(Glutathione_reductose) AND NOT FIREABLE(Phosphoglycerate_mutase)) OR FIREABLE(Glutathione_reductose))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 54 literals and 18 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-9.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-9.sara.
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: ========================================
lola: subprocess 10 will run for 590 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Aldolase) AND FIREABLE(Enolase) AND NOT FIREABLE(TIM_backward) AND (NOT FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(GAP_dehydrogenase)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 20 literals and 5 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-10.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 11 will run for 708 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Phosphoclucose_isomerase) AND FIREABLE(Transaldolase) AND FIREABLE(Aldolase) AND ((FIREABLE(remove) AND FIREABLE(Phosphoglycerate_kinase)) OR (FIREABLE(Enolase) AND FIREABLE(TIM_forward))) AND (FIREABLE(generate) OR FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Enolase)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 53 literals and 5 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-11.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-11.sara.
sara: place or transition ordering is non-deterministic
lola: sara is running 0 secs || 3039723 markings, 7988644 edges, 607945 markings/sec, 0 secs
lola: sara is running 5 secs || 5775797 markings, 15244473 edges, 547215 markings/sec, 5 secs
lola: sara is running 10 secs || 8773044 markings, 23183315 edges, 599449 markings/sec, 10 secs
lola: sara is running 15 secs || 10755091 markings, 28680174 edges, 396409 markings/sec, 15 secs
lola: sara is running 20 secs || 12840208 markings, 34525033 edges, 417023 markings/sec, 20 secs
lola: sara is running 25 secs || 14807616 markings, 40267077 edges, 393482 markings/sec, 25 secs
lola: sara is running 30 secs || 16833343 markings, 46126013 edges, 405145 markings/sec, 30 secs
lola: sara is running 35 secs || 18574130 markings, 51179151 edges, 348157 markings/sec, 35 secs
lola: sara is running 40 secs || 20435269 markings, 56493681 edges, 372228 markings/sec, 40 secs
lola: sara is running 45 secs || 22567948 markings, 61959664 edges, 426536 markings/sec, 45 secs
lola: sara is running 50 secs || 24935316 markings, 68063312 edges, 473474 markings/sec, 50 secs
lola: sara is running 55 secs || 26911430 markings, 73440919 edges, 395223 markings/sec, 55 secs
lola: sara is running 60 secs || 28589991 markings, 78030718 edges, 335712 markings/sec, 60 secs
lola: sara is running 65 secs || 30533892 markings, 83529011 edges, 388780 markings/sec, 65 secs
lola: sara is running 70 secs || 32205549 markings, 88462461 edges, 334331 markings/sec, 70 secs
lola: sara is running 75 secs || 34265916 markings, 94353377 edges, 412073 markings/sec, 75 secs
lola: sara is running 80 secs || 36364520 markings, 100244825 edges, 419721 markings/sec, 80 secs
lola: sara is running 85 secs || 38487631 markings, 106148044 edges, 424622 markings/sec, 85 secs
lola: sara is running 90 secs || 40506952 markings, 111844191 edges, 403864 markings/sec, 90 secs
lola: sara is running 95 secs || 42416272 markings, 117747790 edges, 381864 markings/sec, 95 secs
lola: sara is running 100 secs || 44632169 markings, 124019248 edges, 443179 markings/sec, 100 secs
lola: sara is running 105 secs || 46641437 markings, 129634774 edges, 401854 markings/sec, 105 secs
lola: sara is running 110 secs || 48578190 markings, 135144926 edges, 387351 markings/sec, 110 secs
lola: sara is running 115 secs || 49931009 markings, 139810888 edges, 270564 markings/sec, 115 secs
lola: sara is running 120 secs || 51318509 markings, 144372195 edges, 277500 markings/sec, 120 secs
lola: sara is running 125 secs || 53505256 markings, 150132769 edges, 437349 markings/sec, 125 secs
lola: sara is running 130 secs || 56093336 markings, 156686607 edges, 517616 markings/sec, 130 secs
lola: sara is running 135 secs || 58149822 markings, 162364270 edges, 411297 markings/sec, 135 secs
lola: sara is running 140 secs || 59948476 markings, 167190776 edges, 359731 markings/sec, 140 secs
lola: sara is running 145 secs || 61532175 markings, 171766564 edges, 316740 markings/sec, 145 secs
lola: sara is running 150 secs || 63232800 markings, 176344501 edges, 340125 markings/sec, 150 secs
lola: sara is running 155 secs || 64870851 markings, 181054899 edges, 327610 markings/sec, 155 secs
lola: sara is running 160 secs || 66509928 markings, 185770893 edges, 327815 markings/sec, 160 secs
lola: sara is running 165 secs || 68064728 markings, 190461943 edges, 310960 markings/sec, 165 secs
lola: sara is running 170 secs || 69996472 markings, 196045517 edges, 386349 markings/sec, 170 secs
lola: sara is running 175 secs || 71997967 markings, 201687659 edges, 400299 markings/sec, 175 secs
lola: sara is running 180 secs || 74021503 markings, 207433222 edges, 404707 markings/sec, 180 secs
lola: sara is running 185 secs || 76052378 markings, 213186308 edges, 406175 markings/sec, 185 secs
lola: sara is running 190 secs || 78094842 markings, 218813210 edges, 408493 markings/sec, 190 secs
lola: sara is running 195 secs || 80115513 markings, 224494646 edges, 404134 markings/sec, 195 secs
lola: sara is running 200 secs || 81640441 markings, 229415138 edges, 304986 markings/sec, 200 secs
lola: sara is running 205 secs || 83841385 markings, 235446669 edges, 440189 markings/sec, 205 secs
lola: sara is running 210 secs || 85839695 markings, 241188719 edges, 399662 markings/sec, 210 secs
lola: sara is running 215 secs || 87652789 markings, 246445795 edges, 362619 markings/sec, 215 secs
lola: sara is running 220 secs || 89749823 markings, 251996491 edges, 419407 markings/sec, 220 secs
lola: sara is running 225 secs || 91503879 markings, 257005725 edges, 350811 markings/sec, 225 secs
lola: sara is running 230 secs || 92749478 markings, 261401055 edges, 249120 markings/sec, 230 secs
lola: sara is running 235 secs || 93971783 markings, 265825382 edges, 244461 markings/sec, 235 secs
lola: sara is running 240 secs || 95197875 markings, 270114618 edges, 245218 markings/sec, 240 secs
lola: sara is running 245 secs || 96494103 markings, 274437272 edges, 259246 markings/sec, 245 secs
lola: sara is running 250 secs || 98099875 markings, 278735658 edges, 321154 markings/sec, 250 secs
lola: sara is running 255 secs || 99269273 markings, 282441417 edges, 233880 markings/sec, 255 secs
lola: sara is running 260 secs || 100556016 markings, 286096506 edges, 257349 markings/sec, 260 secs
lola: sara is running 265 secs || 101806064 markings, 289666254 edges, 250010 markings/sec, 265 secs
lola: sara is running 270 secs || 103087739 markings, 293311744 edges, 256335 markings/sec, 270 secs
lola: sara is running 275 secs || 104425146 markings, 297107471 edges, 267481 markings/sec, 275 secs
lola: sara is running 280 secs || 106802760 markings, 303269638 edges, 475523 markings/sec, 280 secs
lola: sara is running 285 secs || 109139520 markings, 309351135 edges, 467352 markings/sec, 285 secs
lola: sara is running 290 secs || 111335093 markings, 315410166 edges, 439115 markings/sec, 290 secs
lola: sara is running 295 secs || 113386299 markings, 321005968 edges, 410241 markings/sec, 295 secs
lola: sara is running 300 secs || 115214985 markings, 326358749 edges, 365737 markings/sec, 300 secs
lola: sara is running 305 secs || 116935777 markings, 330977664 edges, 344158 markings/sec, 305 secs
lola: sara is running 310 secs || 118461813 markings, 335442825 edges, 305207 markings/sec, 310 secs
lola: sara is running 315 secs || 120061322 markings, 339703449 edges, 319902 markings/sec, 315 secs
lola: sara is running 320 secs || 121581380 markings, 344110035 edges, 304012 markings/sec, 320 secs
lola: sara is running 325 secs || 123150931 markings, 348628791 edges, 313910 markings/sec, 325 secs
lola: sara is running 330 secs || 124637091 markings, 353077334 edges, 297232 markings/sec, 330 secs
lola: sara is running 335 secs || 126132396 markings, 357528640 edges, 299061 markings/sec, 335 secs
lola: sara is running 340 secs || 128071276 markings, 363164391 edges, 387776 markings/sec, 340 secs
lola: sara is running 345 secs || 129962510 markings, 368602470 edges, 378247 markings/sec, 345 secs
lola: sara is running 350 secs || 131879990 markings, 374105964 edges, 383496 markings/sec, 350 secs
lola: sara is running 355 secs || 133857695 markings, 379543171 edges, 395541 markings/sec, 355 secs
lola: sara is running 360 secs || 135822010 markings, 385141866 edges, 392863 markings/sec, 360 secs
lola: sara is running 365 secs || 137850442 markings, 390708247 edges, 405686 markings/sec, 365 secs
lola: sara is running 370 secs || 139765927 markings, 396104596 edges, 383097 markings/sec, 370 secs
lola: sara is running 375 secs || 141599946 markings, 401235150 edges, 366804 markings/sec, 375 secs
lola: sara is running 380 secs || 142975663 markings, 405859522 edges, 275143 markings/sec, 380 secs
lola: sara is running 385 secs || 145011982 markings, 411581022 edges, 407264 markings/sec, 385 secs
lola: sara is running 390 secs || 147238981 markings, 417289411 edges, 445400 markings/sec, 390 secs
lola: sara is running 395 secs || 148951062 markings, 422569044 edges, 342416 markings/sec, 395 secs
lola: sara is running 400 secs || 150503798 markings, 427110207 edges, 310547 markings/sec, 400 secs
lola: sara is running 405 secs || 152545626 markings, 432581024 edges, 408366 markings/sec, 405 secs
lola: sara is running 410 secs || 154525673 markings, 437892097 edges, 396009 markings/sec, 410 secs
lola: sara is running 415 secs || 155936862 markings, 442311184 edges, 282238 markings/sec, 415 secs
lola: sara is running 420 secs || 156975225 markings, 446097293 edges, 207673 markings/sec, 420 secs
lola: sara is running 425 secs || 158169630 markings, 450401117 edges, 238881 markings/sec, 425 secs
lola: sara is running 430 secs || 159305183 markings, 454605996 edges, 227111 markings/sec, 430 secs
lola: sara is running 435 secs || 160467606 markings, 458709614 edges, 232485 markings/sec, 435 secs
lola: sara is running 440 secs || 161733022 markings, 462966311 edges, 253083 markings/sec, 440 secs
lola: sara is running 445 secs || 162999265 markings, 466983268 edges, 253249 markings/sec, 445 secs
lola: sara is running 450 secs || 164483161 markings, 470903065 edges, 296779 markings/sec, 450 secs
lola: sara is running 455 secs || 165574232 markings, 474376712 edges, 218214 markings/sec, 455 secs
lola: sara is running 460 secs || 167057287 markings, 478673756 edges, 296611 markings/sec, 460 secs
lola: sara is running 465 secs || 168867683 markings, 483775582 edges, 362079 markings/sec, 465 secs
lola: sara is running 470 secs || 170511647 markings, 488535495 edges, 328793 markings/sec, 470 secs
lola: sara is running 475 secs || 172391398 markings, 493878152 edges, 375950 markings/sec, 475 secs
lola: sara is running 480 secs || 174441587 markings, 499444942 edges, 410038 markings/sec, 480 secs
lola: sara is running 485 secs || 177032027 markings, 506034680 edges, 518088 markings/sec, 485 secs
lola: sara is running 490 secs || 179258795 markings, 512052355 edges, 445354 markings/sec, 490 secs
lola: sara is running 495 secs || 181212904 markings, 517374891 edges, 390822 markings/sec, 495 secs
lola: sara is running 500 secs || 182828942 markings, 521890105 edges, 323208 markings/sec, 500 secs
lola: sara is running 505 secs || 184402878 markings, 526443857 edges, 314787 markings/sec, 505 secs
lola: sara is running 510 secs || 185999378 markings, 530735089 edges, 319300 markings/sec, 510 secs
lola: sara is running 515 secs || 187478556 markings, 535090092 edges, 295836 markings/sec, 515 secs
lola: sara is running 520 secs || 189113504 markings, 539562645 edges, 326990 markings/sec, 520 secs
lola: sara is running 525 secs || 190551309 markings, 543656277 edges, 287561 markings/sec, 525 secs
lola: sara is running 530 secs || 192204843 markings, 548183347 edges, 330707 markings/sec, 530 secs
lola: sara is running 535 secs || 193618363 markings, 552201080 edges, 282704 markings/sec, 535 secs
lola: sara is running 540 secs || 195264159 markings, 556843105 edges, 329159 markings/sec, 540 secs
lola: sara is running 545 secs || 196711201 markings, 561168533 edges, 289408 markings/sec, 545 secs
lola: sara is running 550 secs || 198159062 markings, 565554110 edges, 289572 markings/sec, 550 secs
lola: sara is running 555 secs || 199498508 markings, 569555388 edges, 267889 markings/sec, 555 secs
lola: sara is running 560 secs || 199518660 markings, 569613178 edges, 4030 markings/sec, 560 secs
lola: sara is running 565 secs || 199557162 markings, 569723679 edges, 7700 markings/sec, 565 secs
lola: sara is running 570 secs || 199563486 markings, 569741826 edges, 1265 markings/sec, 570 secs
lola: sara is running 575 secs || 199563558 markings, 569742011 edges, 14 markings/sec, 575 secs
lola: sara is running 580 secs || 199582658 markings, 569796876 edges, 3820 markings/sec, 580 secs
lola: sara is running 585 secs || 199584235 markings, 569801343 edges, 315 markings/sec, 585 secs
lola: sara is running 590 secs || 199584315 markings, 569801598 edges, 16 markings/sec, 590 secs
lola: sara is running 595 secs || 199587153 markings, 569809756 edges, 568 markings/sec, 595 secs
lola: sara is running 600 secs || 199587217 markings, 569809960 edges, 13 markings/sec, 600 secs
lola: sara is running 605 secs || 199597773 markings, 569840271 edges, 2111 markings/sec, 605 secs
lola: sara is running 610 secs || 199597857 markings, 569840473 edges, 17 markings/sec, 610 secs
lola: sara is running 615 secs || 199599393 markings, 569844859 edges, 307 markings/sec, 615 secs
lola: sara is running 620 secs || 199624830 markings, 569917906 edges, 5087 markings/sec, 620 secs
lola: sara is running 625 secs || 199635846 markings, 569949454 edges, 2203 markings/sec, 625 secs
lola: sara is running 630 secs || 199635906 markings, 569949640 edges, 12 markings/sec, 630 secs
lola: sara is running 635 secs || 199639625 markings, 569960330 edges, 744 markings/sec, 635 secs
lola: sara is running 640 secs || 199651374 markings, 569994039 edges, 2350 markings/sec, 640 secs
lola: sara is running 645 secs || 199665596 markings, 570034863 edges, 2844 markings/sec, 645 secs
lola: sara is running 650 secs || 199681375 markings, 570080150 edges, 3156 markings/sec, 650 secs
lola: sara is running 655 secs || 199687917 markings, 570098914 edges, 1308 markings/sec, 655 secs
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 12 will run for 717 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((NOT FIREABLE(Hexokinase) AND FIREABLE(Phosphofructokinase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 3 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: subprocess 13 will run for 957 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Enolase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: lola: using 84 bytes per marking, with 0 unused bits
========================================lola:
using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: subprocess 14 will run for 1435 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Transaldolase) OR NOT FIREABLE(GAP_dehydrogenase))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 7 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-14.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-14.sara.
sara: place or transition ordering is non-deterministic
lola: state equation: solution impossible
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is invariant.
lola: ========================================
lola: subprocess 15 will run for 2871 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Phosphoglycerate_mutase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-15.sara
lola: RESULT
lola:
SUMMARY: yes no no yes no no no yes yes no yes unknown yes yes yes yes
lola: state equation: calling and running sara
lola: ========================================
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-15.sara.
sara: place or transition ordering is non-deterministic
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-0 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-1 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-2 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-3 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-4 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-5 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-6 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-7 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-8 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-9 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-10 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-11 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-12 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-13 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-14 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-15 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
----- Kill lola and sara stdout -----
----- Finished stdout -----
BK_STOP 1494721773944
--------------------
content from stderr:
----- Start make prepare stderr -----
----- Start make result stderr -----
----- Start make result stderr -----
----- Kill lola and sara stderr -----
----- Finished stderr -----
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0100N0000000100"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="lola"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0100N0000000100.tgz
mv GPPP-PT-C0100N0000000100 execution
# this is for BenchKit: explicit launching of the test
cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-3254"
echo " Executing tool lola"
echo " Input is GPPP-PT-C0100N0000000100, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r028-blw3-149440264400540"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;