Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..............
=====================================================================
Generated by BenchKit 2-3254
Executing tool lola
Input is GPPP-PT-C0001N0000000001, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r028-blw3-149440264400513
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-0
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-1
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-10
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-11
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-12
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-13
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-14
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-15
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-2
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-3
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-4
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-5
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-6
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-7
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-8
FORMULA_NAME GPPP-PT-C0001N0000000001-ReachabilityFireability-9

=== Now, execution of the tool begins

BK_START 1494719896009


Time: 3600 - MCC
----- Start make prepare stdout -----
checking for too many tokens
----- Start make result stdout -----
ReachabilityFireability @ GPPP-PT-C0001N0000000001 @ 3540 seconds
----- Start make result stdout -----
lola: LoLA will run for 3540 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 55/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: finding significant places
lola: 33 places, 22 transitions, 20 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 30 transition conflict sets
lola: TASK
lola: reading formula from GPPP-PT-C0001N0000000001-ReachabilityFireability.task
lola: A (G (())) : E (F ((FIREABLE(Transketolase1) AND (FIREABLE(Transaldolase) OR FIREABLE(generate) OR FIREABLE(G6P_dehydrogenase) OR FIREABLE(Transaldolase)) AND (FIREABLE(remove) OR FIREABLE(generate))))) : A (G ((NOT FIREABLE(Transaldolase) OR NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Phosphoclucose_isomerase) OR (NOT FIREABLE(Phosphoclucose_isomerase) AND NOT FIREABLE(Lactate_dehydrogenase))))) : E (F ((FIREABLE(Aldolase) AND FIREABLE(Transketolase1) AND (FIREABLE(Ru5P_epimerase) OR FIREABLE(GAP_dehydrogenase))))) : E (F (FIREABLE(remove))) : A (G ((NOT FIREABLE(Enolase) OR NOT FIREABLE(Lactate_dehydrogenase) OR (NOT FIREABLE(Transaldolase) AND NOT FIREABLE(Phosphoglycerate_kinase)) OR (NOT FIREABLE(Transketolase2) AND NOT FIREABLE(Phosphoclucose_isomerase) AND (NOT FIREABLE(Enolase) OR NOT FIREABLE(Aldolase)))))) : E (F ((FIREABLE(Ru5P_isomerase) AND FIREABLE(Transaldolase)))) : E (F (())) : E (F (((FIREABLE(GAP_dehydrogenase) OR FIREABLE(Phosphoglycerate_kinase)) AND (NOT FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Aldolase)) AND FIREABLE(Transketolase1)))) : A (G ((FIREABLE(TIM_backward) OR FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Phosphoglycerate_mutase) OR (NOT FIREABLE(Transaldolase) AND NOT FIREABLE(Transketolase1)) OR FIREABLE(GAP_dehydrogenase)))) : A (G ((NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Aldolase) OR (NOT FIREABLE(Pyruvate_kinase) AND NOT FIREABLE(Glutathione_reductose)) OR (NOT FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(TIM_backward) AND (NOT FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(Transketolase1)))))) : E (F ((FIREABLE(Transketolase1) AND FIREABLE(Pyruvate_kinase) AND (FIREABLE(Enolase) OR FIREABLE(Phosphoclucose_isomerase))))) : E (F ((FIREABLE(Glutathione_oxidation) AND FIREABLE(Glutathione_reductose) AND (FIREABLE(Glutathione_reductose) OR FIREABLE(TIM_forward)) AND FIREABLE(Ru5P_isomerase) AND FIREABLE(Hexokinase) AND FIREABLE(TIM_forward)))) : E (F ((FIREABLE(Pyruvate_kinase) AND FIREABLE(Transaldolase) AND FIREABLE(Ru5P_epimerase) AND FIREABLE(Pyruvate_kinase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Enolase) AND (NOT FIREABLE(Transaldolase) OR NOT FIREABLE(Phosphofructokinase) OR (NOT FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Enolase)))))) : A (G ((FIREABLE(Phosphoclucose_isomerase) OR FIREABLE(Lactate_dehydrogenase) OR NOT FIREABLE(Transaldolase) OR (NOT FIREABLE(Glutathione_reductose) AND NOT FIREABLE(GAP_dehydrogenase)) OR NOT FIREABLE(Pyruvate_kinase)))) : E (F ((NOT FIREABLE(Lactate_dehydrogenase) AND NOT FIREABLE(GAP_dehydrogenase) AND (FIREABLE(Enolase) OR FIREABLE(Ru5P_epimerase)) AND NOT FIREABLE(Pyruvate_kinase) AND ((FIREABLE(generate) AND FIREABLE(Transketolase1)) OR (FIREABLE(Aldolase) AND FIREABLE(G6P_dehydrogenase)) OR (FIREABLE(Phosphofructokinase) AND FIREABLE(G6P_dehydrogenase) AND FIREABLE(Phosphoglycerate_kinase))))))
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G (()))
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: TRUE
lola: processed formula length: 4
lola: 3 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C0001N0000000001-ReachabilityFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: preprocessing
lola: The net satisfies the property already in its initial state.
lola: ========================================
lola: subprocess 1 will run for 236 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Transketolase1) AND (FIREABLE(Transaldolase) OR FIREABLE(generate) OR FIREABLE(G6P_dehydrogenase) OR FIREABLE(Transaldolase)) AND (FIREABLE(remove) OR FIREABLE(generate)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 35 literals and 6 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 2 will run for 252 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Transaldolase) OR NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Phosphoclucose_isomerase) OR (NOT FIREABLE(Phosphoclucose_isomerase) AND NOT FIREABLE(Lactate_dehydrogenase)))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 20 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-2.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is invariant.
lola: ========================================
lola: subprocess 3 will run for 272 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Aldolase) AND FIREABLE(Transketolase1) AND (FIREABLE(Ru5P_epimerase) OR FIREABLE(GAP_dehydrogenase)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 12 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-3.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 4 will run for 295 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(remove)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-4.sara
lola: ========================================
lola: subprocess 5 will run for 321 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Enolase) OR NOT FIREABLE(Lactate_dehydrogenase) OR (NOT FIREABLE(Transaldolase) AND NOT FIREABLE(Phosphoglycerate_kinase)) OR (NOT FIREABLE(Transketolase2) AND NOT FIREABLE(Phosphoclucose_isomerase) AND (NOT FIREABLE(Enolase) OR NOT FIREABLE(Aldolase))))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 45 literals and 6 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-5.sara
lola: state equation: calling and running sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is invariant.
lola: ========================================
lola: subprocess 6 will run for 354 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Ru5P_isomerase) AND FIREABLE(Transaldolase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 5 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-6.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 7 will run for 393 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (()))
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: FALSE
lola: processed formula length: 5
lola: 3 rewrites
lola: formula mentions 0 of 33 places; total mentions: 0
lola: closed formula file GPPP-PT-C0001N0000000001-ReachabilityFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: preprocessing
lola: The net violates the given property already in its initial state.
lola: ========================================
lola: subprocess 8 will run for 442 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((FIREABLE(GAP_dehydrogenase) OR FIREABLE(Phosphoglycerate_kinase)) AND (NOT FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Aldolase)) AND FIREABLE(Transketolase1))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 31 literals and 5 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-8.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 9 will run for 505 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((FIREABLE(TIM_backward) OR FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Phosphoglycerate_mutase) OR (NOT FIREABLE(Transaldolase) AND NOT FIREABLE(Transketolase1)) OR FIREABLE(GAP_dehydrogenase))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 48 literals and 8 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-9.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is invariant.
lola: ========================================
lola: subprocess 10 will run for 590 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Aldolase) OR (NOT FIREABLE(Pyruvate_kinase) AND NOT FIREABLE(Glutathione_reductose)) OR (NOT FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(TIM_backward) AND (NOT FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(Transketolase1))))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 46 literals and 6 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-10.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: ========================================
lola: subprocess 11 will run for 708 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Transketolase1) AND FIREABLE(Pyruvate_kinase) AND (FIREABLE(Enolase) OR FIREABLE(Phosphoclucose_isomerase)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 11 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-11.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 12 will run for 885 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Glutathione_oxidation) AND FIREABLE(Glutathione_reductose) AND (FIREABLE(Glutathione_reductose) OR FIREABLE(TIM_forward)) AND FIREABLE(Ru5P_isomerase) AND FIREABLE(Hexokinase) AND FIREABLE(TIM_forward))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 19 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-12.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 13 will run for 1180 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Pyruvate_kinase) AND FIREABLE(Transaldolase) AND FIREABLE(Ru5P_epimerase) AND FIREABLE(Pyruvate_kinase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Enolase) AND (NOT FIREABLE(Transaldolase) OR NOT FIREABLE(Phosphofructokinase) OR (NOT FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Enolase))))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 49 literals and 4 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-13.sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 14 will run for 1770 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((FIREABLE(Phosphoclucose_isomerase) OR FIREABLE(Lactate_dehydrogenase) OR NOT FIREABLE(Transaldolase) OR (NOT FIREABLE(Glutathione_reductose) AND NOT FIREABLE(GAP_dehydrogenase)) OR NOT FIREABLE(Pyruvate_kinase))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 80 literals and 8 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0001N0000000001-ReachabilityFireability-14.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is invariant.
lola: ========================================
lola: subprocess 15 will run for 3540 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((NOT FIREABLE(Lactate_dehydrogenase) AND NOT FIREABLE(GAP_dehydrogenase) AND (FIREABLE(Enolase) OR FIREABLE(Ru5P_epimerase)) AND NOT FIREABLE(Pyruvate_kinase) AND ((FIREABLE(generate) AND FIREABLE(Transketolase1)) OR (FIREABLE(Aldolase) AND FIREABLE(G6P_dehydrogenase)) OR (FIREABLE(Phosphofructokinase) AND FIREABLE(G6P_dehydrogenase) AND FIREABLE(Phosphoglycerate_kinase))))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 80 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: ========================================
lola: RESULT
lola:
SUMMARY: yes no yes no yes yes no no no yes no no no no yes yes
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-0 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-1 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-2 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-3 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-4 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-5 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-6 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-7 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-8 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-9 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-10 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-11 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-12 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-13 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-14 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0001N0000000001-ReachabilityFireability-15 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
----- Kill lola and sara stdout -----
----- Finished stdout -----

BK_STOP 1494719896188

--------------------
content from stderr:

----- Start make prepare stderr -----
----- Start make result stderr -----
----- Start make result stderr -----
----- Kill lola and sara stderr -----
----- Finished stderr -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0001N0000000001"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="lola"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0001N0000000001.tgz
mv GPPP-PT-C0001N0000000001 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-3254"
echo " Executing tool lola"
echo " Input is GPPP-PT-C0001N0000000001, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r028-blw3-149440264400513"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;