Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
........
=====================================================================
Generated by BenchKit 2-3254
Executing tool marcie
Input is GPPP-PT-C0100N0000000100, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r021-blw3-149440255300538
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-0
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-1
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-10
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-11
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-12
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-13
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-14
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-15
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-2
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-3
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-4
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-5
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-6
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-7
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-8
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityCardinality-9

=== Now, execution of the tool begins

BK_START 1494464597468

timeout --kill-after=10s --signal=SIGINT 1m for testing only

Marcie rev. 8852M (built: crohr on 2017-05-03)
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: marcie --net-file=model.pnml --mcc-file=ReachabilityCardinality.xml --memory=6

parse successfull
net created successfully

Net: GPPP_PT_C0100N0000000100
(NrP: 33 NrTr: 22 NrArc: 83)

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.000sec

net check time: 0m 0.000sec

init dd package: 0m 1.161sec

parse successfull
net created successfully

Net: GPPP_PT_C0100N0000000100
(NrP: 33 NrTr: 22 NrArc: 83)

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.000sec

net check time: 0m 0.000sec

init dd package: 0m 3.847sec


RS generation: 1m27.516sec


-> reachability set: #nodes 562750 (5.6e+05) #states 2,454,033,179,726,092 (15)



starting MCC model checker
--------------------------

checking: EF [2<=PEP]
normalized: E [true U 2<=PEP]

abstracting: (2<=PEP)
states: 560,799,162,711,261 (14)
MC time: 3m40.853sec

checking: EF [1<=_2PG]
normalized: E [true U 1<=_2PG]

abstracting: (1<=_2PG)
states: 1,205,968,044,737,079 (15)
MC time: 3m26.431sec

checking: AG [3<=ATP]
normalized: ~ [E [true U ~ [3<=ATP]]]

abstracting: (3<=ATP)
states: 2,420,093,141,287,864 (15)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-10 CANNOT_COMPUTE

MC time: 2m31.505sec

checking: AG [Pyr<=ATP]
normalized: ~ [E [true U ~ [Pyr<=ATP]]]

abstracting: (Pyr<=ATP)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-8 CANNOT_COMPUTE

MC time: 0m 0.003sec

checking: EF [GSSG<=Pyr]
normalized: E [true U GSSG<=Pyr]

abstracting: (GSSG<=Pyr)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-13 CANNOT_COMPUTE

MC time: 0m 0.000sec

checking: AG [Pyr<=GSSG]
normalized: ~ [E [true U ~ [Pyr<=GSSG]]]

abstracting: (Pyr<=GSSG)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-14 CANNOT_COMPUTE

MC time: 0m 0.000sec

checking: AG [[NADplus<=ATP | 2<=Xu5P]]
normalized: ~ [E [true U ~ [[NADplus<=ATP | 2<=Xu5P]]]]

abstracting: (2<=Xu5P)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-5 CANNOT_COMPUTE

MC time: 0m 0.000sec

checking: AG [[3<=Pyr | ~ [~ [NADPH<=ATP]]]]
normalized: ~ [E [true U ~ [[3<=Pyr | NADPH<=ATP]]]]

abstracting: (NADPH<=ATP)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-6 CANNOT_COMPUTE

MC time: 0m 0.000sec

checking: AG [[~ [[1<=_3PG & F6P<=G6P]] | 2<=a1]]
normalized: ~ [E [true U ~ [[2<=a1 | ~ [[1<=_3PG & F6P<=G6P]]]]]]

abstracting: (F6P<=G6P)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-4 CANNOT_COMPUTE

MC time: 0m 0.000sec

checking: AG [[[1<=ATP & PEP<=Gluc] & 2<=NADPplus]]
normalized: ~ [E [true U ~ [[2<=NADPplus & [1<=ATP & PEP<=Gluc]]]]]

abstracting: (PEP<=Gluc)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-9 CANNOT_COMPUTE

MC time: 0m 0.000sec

checking: EF [[3<=R5P & [~ [2<=Xu5P] & ~ [ADP<=NADplus]]]]
normalized: E [true U [3<=R5P & [~ [ADP<=NADplus] & ~ [2<=Xu5P]]]]

abstracting: (2<=Xu5P)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-12 CANNOT_COMPUTE

MC time: 0m 0.000sec

checking: AG [~ [[[1<=Xu5P & Pi<=Pyr] & ~ [3<=c1]]]]
normalized: ~ [E [true U [~ [3<=c1] & [1<=Xu5P & Pi<=Pyr]]]]

abstracting: (Pi<=Pyr)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-15 CANNOT_COMPUTE

MC time: 0m 0.000sec

checking: AG [~ [[[3<=Xu5P & F6P<=R5P] & [1<=NADPplus & 2<=c1]]]]
normalized: ~ [E [true U [[1<=NADPplus & 2<=c1] & [3<=Xu5P & F6P<=R5P]]]]

abstracting: (F6P<=R5P)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-11 CANNOT_COMPUTE

MC time: 0m 0.000sec

checking: EF [[[~ [1<=GAP] & [2<=S7P | 2<=NADH]] & [~ [1<=ATP] & [2<=FBP | 1<=PEP]]]]
normalized: E [true U [[[2<=FBP | 1<=PEP] & ~ [1<=ATP]] & [[2<=S7P | 2<=NADH] & ~ [1<=GAP]]]]

abstracting: (1<=GAP)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-3 CANNOT_COMPUTE

MC time: 0m 0.000sec

checking: EF [~ [[[F6P<=Gluc & 3<=PEP] | [3<=Ru5P | _2PG<=_2PG]]]]
normalized: E [true U ~ [[[F6P<=Gluc & 3<=PEP] | [3<=Ru5P | _2PG<=_2PG]]]]

abstracting: (_2PG<=_2PG)
states: 2,454,033,179,726,092 (15)
abstracting: (3<=Ru5P)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-7 CANNOT_COMPUTE

MC time: 0m 0.036sec

checking: AG [[[F6P<=start | [PEP<=Pi & NADPplus<=c1]] | [[F6P<=GSSG | Xu5P<=_1_3_BPG] | [2<=Lac & b2<=Ru5P]]]]
normalized: ~ [E [true U ~ [[[[2<=Lac & b2<=Ru5P] | [F6P<=GSSG | Xu5P<=_1_3_BPG]] | [F6P<=start | [PEP<=Pi & NADPplus<=c1]]]]]]

abstracting: (NADPplus<=c1)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-0 CANNOT_COMPUTE

MC time: 0m 0.003sec

checking: EF [2<=PEP]
normalized: E [true U 2<=PEP]

abstracting: (2<=PEP)
states: 560,799,162,711,261 (14)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-1 CANNOT_COMPUTE

MC time: 0m 0.003sec

checking: EF [1<=_2PG]
normalized: E [true U 1<=_2PG]

abstracting: (1<=_2PG)
states: 1,205,968,044,737,079 (15)

FORMULA GPPP-PT-C0100N0000000100-ReachabilityCardinality-2 CANNOT_COMPUTE

MC time: 0m 0.000sec

totally nodes used: 56096472 (5.6e+07)
number of garbage collections: 0
fire ops cache: hits/miss/sum: 868847890 268704670 1137552560
used/not used/entry size/cache size: 66461331 647533 16 1024MB
basic ops cache: hits/miss/sum: 214171555 57062656 271234211
used/not used/entry size/cache size: 16581853 195363 12 192MB
unary ops cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 16777216 8 128MB
abstract ops cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 16777216 12 192MB
state nr cache: hits/miss/sum: 13164133 1931327 15095460
used/not used/entry size/cache size: 1715119 6673489 32 256MB
max state cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 8388608 32 256MB
uniqueHash elements/entry size/size: 67108864 4 256MB
0 30560103
1 23229184
2 9458787
3 2749763
4 707299
5 197922
6 85492
7 62883
8 33938
9 12009
>= 10 11484

Total processing time: 11m23.139sec


BK_STOP 1494465281008

--------------------
content from stderr:

check for maximal unmarked siphon
ok
check for constant places
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok

ptnet_zbdd.cc:255: Boundedness exception: net is not 1-bounded!

check for maximal unmarked siphon
ok
check for constant places
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m 0.000sec


iterations count:11981 (544), effective:2887 (131)

initing FirstDep: 0m 0.000sec


sat_reach.icc:155: Timeout: after 219 sec


sat_reach.icc:155: Timeout: after 205 sec

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0100N0000000100"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="marcie"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0100N0000000100.tgz
mv GPPP-PT-C0100N0000000100 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-3254"
echo " Executing tool marcie"
echo " Input is GPPP-PT-C0100N0000000100, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r021-blw3-149440255300538"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;