fond
Model Checking Contest @ Petri Nets 2016
6th edition, Toruń, Poland, June 21, 2016
Execution of r173kn-ebro-146433144700034
Last Updated
June 30, 2016

About the Execution of Marcie for S_Angiogenesis-PT-10

Execution Summary
Max Memory
Used (MB)
Time wait (ms) CPU Usage (ms) I/O Wait (ms) Computed Result Execution
Status
11534.160 2124267.00 2124286.00 20.00 TTTFFTFFFTFFTTTT normal

Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..............
=====================================================================
Generated by BenchKit 2-2979
Executing tool marcie
Input is S_Angiogenesis-PT-10, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r173kn-ebro-146433144700034
=====================================================================


--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-0
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-1
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-10
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-11
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-12
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-13
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-14
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-15
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-2
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-3
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-4
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-5
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-6
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-7
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-8
FORMULA_NAME Angiogenesis-PT-10-ReachabilityCardinality-9

=== Now, execution of the tool begins

BK_START 1464784852729


Marcie rev. 8535M (built: crohr on 2016-04-27)
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: marcie --net-file=model.pnml --mcc-file=ReachabilityCardinality.xml --mcc-mode --memory=6 --suppress

parse successfull
net created successfully

Net: Angiogenesis_PT_10
(NrP: 39 NrTr: 64 NrArc: 185)

net check time: 0m 0.000sec

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.000sec

init dd package: 0m 6.294sec


RS generation: 0m16.748sec


-> reachability set: #nodes 128274 (1.3e+05) #states 822,645,885,495 (11)



starting MCC model checker
--------------------------

checking: EF [3<=AktP3]
normalized: E [true U 3<=AktP3]

abstracting: (3<=AktP3) states: 41,865,712,260 (10)
-> the formula is TRUE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-6 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 1m 4.096sec

checking: EF [~ [3<=P3k]]
normalized: E [true U ~ [3<=P3k]]

abstracting: (3<=P3k) states: 817,995,718,972 (11)
-> the formula is TRUE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-10 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 1m11.881sec

checking: EF [~ [KdStarGP3<=KdStarGStarPg]]
normalized: E [true U ~ [KdStarGP3<=KdStarGStarPg]]

abstracting: (KdStarGP3<=KdStarGStarPg) states: 716,674,205,390 (11)
-> the formula is TRUE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-8 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 1m 2.943sec

checking: AG [KdStarGStarP3kStarP2<=Akt]
normalized: ~ [E [true U ~ [KdStarGStarP3kStarP2<=Akt]]]

abstracting: (KdStarGStarP3kStarP2<=Akt) states: 802,901,242,105 (11)
-> the formula is FALSE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-11 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 3m50.109sec

checking: AG [[1<=Pip2 | ~ [1<=KdStarGStar]]]
normalized: ~ [E [true U ~ [[1<=Pip2 | ~ [1<=KdStarGStar]]]]]

abstracting: (1<=KdStarGStar) states: 365,203,299,954 (11)
abstracting: (1<=Pip2) states: 368,924,277,954 (11)
-> the formula is FALSE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-12 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 1m 0.836sec

checking: AG [~ [Akt<=KdStarGStarP3kStarP2]]
normalized: ~ [E [true U Akt<=KdStarGStarP3kStarP2]]

abstracting: (Akt<=KdStarGStarP3kStarP2) states: 99,855,569,892 (10)
-> the formula is FALSE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-14 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 3m30.056sec

checking: AG [KdStarGStarPgStarP3<=AktP3]
normalized: ~ [E [true U ~ [KdStarGStarPgStarP3<=AktP3]]]

abstracting: (KdStarGStarPgStarP3<=AktP3) states: 712,377,876,030 (11)
-> the formula is FALSE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-15 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 1m 1.787sec

checking: AG [[[3<=GStarPgP3 | 2<=P3k] | 2<=Pg]]
normalized: ~ [E [true U ~ [[2<=Pg | [3<=GStarPgP3 | 2<=P3k]]]]]

abstracting: (2<=P3k) states: 821,813,315,242 (11)
abstracting: (3<=GStarPgP3) states: 16,954,682,307 (10)
abstracting: (2<=Pg) states: 776,642,401,686 (11)
-> the formula is FALSE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-5 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m57.970sec

checking: EF [[2<=KdStarGStarPgP3 | P3k<=KdStarGStarPgStar]]
normalized: E [true U [2<=KdStarGStarPgP3 | P3k<=KdStarGStarPgStar]]

abstracting: (P3k<=KdStarGStarPgStar) states: 311,218,557 (8)
abstracting: (2<=KdStarGStarPgP3) states: 30,441,494,561 (10)
-> the formula is TRUE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-7 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 3m 8.600sec

checking: AG [[KdStarGStarP3kStarP3<=KdStarGStarP3kP3 | Enz<=KdStarGStarPgStarP2]]
normalized: ~ [E [true U ~ [[KdStarGStarP3kStarP3<=KdStarGStarP3kP3 | Enz<=KdStarGStarPgStarP2]]]]

abstracting: (Enz<=KdStarGStarPgStarP2) states: 1,013,298 (6)
abstracting: (KdStarGStarP3kStarP3<=KdStarGStarP3kP3) states: 681,258,533,230 (11)
-> the formula is FALSE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-2 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m50.604sec

checking: EF [[~ [[3<=Pg | AktP3<=P3k]] & [~ [1<=P3k] | 2<=GStarP3kP3]]]
normalized: E [true U [[2<=GStarP3kP3 | ~ [1<=P3k]] & ~ [[3<=Pg | AktP3<=P3k]]]]

abstracting: (AktP3<=P3k) states: 821,916,937,658 (11)
abstracting: (3<=Pg) states: 711,274,715,013 (11)
abstracting: (1<=P3k) states: 822,568,558,183 (11)
abstracting: (2<=GStarP3kP3) states: 80,160,051,429 (10)
-> the formula is TRUE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-9 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 2m23.042sec

checking: EF [~ [[[KdStarGStarP3<=KdStarPg | 3<=DAG] | [KdStarGStar<=Pg & KdStarGStar<=KdStarGStarPgStar]]]]
normalized: E [true U ~ [[[KdStarGStarP3<=KdStarPg | 3<=DAG] | [KdStarGStar<=Pg & KdStarGStar<=KdStarGStarPgStar]]]]

abstracting: (KdStarGStar<=KdStarGStarPgStar) states: 564,819,179,989 (11)
abstracting: (KdStarGStar<=Pg) states: 817,589,955,787 (11)
abstracting: (3<=DAG) states: 58,569,619,476 (10)
abstracting: (KdStarGStarP3<=KdStarPg) states: 736,836,626,446 (11)
-> the formula is TRUE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-3 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 3m 0.376sec

checking: EF [[[~ [1<=DAG] & ~ [KdStarGStarP3k<=Pg]] & [[Gab1<=KdStarGStarPgStar & 3<=DAGE] & KdStarGStarPgStarP3<=GStarP3kP3]]]
normalized: E [true U [[KdStarGStarPgStarP3<=GStarP3kP3 & [Gab1<=KdStarGStarPgStar & 3<=DAGE]] & [~ [KdStarGStarP3k<=Pg] & ~ [1<=DAG]]]]

abstracting: (1<=DAG) states: 368,924,277,954 (11)
abstracting: (KdStarGStarP3k<=Pg) states: 817,589,955,787 (11)
abstracting: (3<=DAGE) states: 58,569,619,476 (10)
abstracting: (Gab1<=KdStarGStarPgStar) states: 356,466,615,377 (11)
abstracting: (KdStarGStarPgStarP3<=GStarP3kP3) states: 700,896,256,637 (11)
-> the formula is TRUE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-0 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 2m58.230sec

checking: EF [[[~ [AktP3<=KdStarGStarP3] | [1<=Pten | 1<=KdStarGStarPgStar]] & [~ [1<=KdStar] & [2<=P3k | KdStarGStarP3<=DAG]]]]
normalized: E [true U [[~ [1<=KdStar] & [2<=P3k | KdStarGStarP3<=DAG]] & [[1<=Pten | 1<=KdStarGStarPgStar] | ~ [AktP3<=KdStarGStarP3]]]]

abstracting: (AktP3<=KdStarGStarP3) states: 534,070,276,523 (11)
abstracting: (1<=KdStarGStarPgStar) states: 362,685,744,032 (11)
abstracting: (1<=Pten) states: 822,640,625,097 (11)
abstracting: (KdStarGStarP3<=DAG) states: 718,094,056,771 (11)
abstracting: (2<=P3k) states: 821,813,315,242 (11)
abstracting: (1<=KdStar) states: 469,977,654,509 (11)
-> the formula is TRUE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-1 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m24.418sec

checking: EF [[[[Enz<=KdStarGStarP3kP3 | KdStarGStarP3kP3<=KdStarGStarPgStar] | ~ [KdStarGStarPgStar<=KdStarGStarP3k]] & Pg<=KdStarGStarP3]]
normalized: E [true U [Pg<=KdStarGStarP3 & [~ [KdStarGStarPgStar<=KdStarGStarP3k] | [Enz<=KdStarGStarP3kP3 | KdStarGStarP3kP3<=KdStarGStarPgStar]]]]

abstracting: (KdStarGStarP3kP3<=KdStarGStarPgStar) states: 716,585,488,131 (11)
abstracting: (Enz<=KdStarGStarP3kP3) states: 1,013,298 (6)
abstracting: (KdStarGStarPgStar<=KdStarGStarP3k) states: 567,524,406,986 (11)
abstracting: (Pg<=KdStarGStarP3) states: 17,513,224,440 (10)
-> the formula is TRUE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-13 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 2m29.254sec

checking: AG [[[[1<=KdStarGStarP3kStarP2 | KdStarGStarPgStar<=KdStarPg] | 3<=KdStar] | [[GStarP3kP3<=DAGE & KdStarGP3<=DAG] & ~ [PtP2<=KdStarPgStar]]]]
normalized: ~ [E [true U ~ [[[[GStarP3kP3<=DAGE & KdStarGP3<=DAG] & ~ [PtP2<=KdStarPgStar]] | [3<=KdStar | [1<=KdStarGStarP3kStarP2 | KdStarGStarPgStar<=KdStarPg]]]]]]

abstracting: (KdStarGStarPgStar<=KdStarPg) states: 607,352,342,306 (11)
abstracting: (1<=KdStarGStarP3kStarP2) states: 167,755,076,831 (11)
abstracting: (3<=KdStar) states: 110,144,637,122 (11)
abstracting: (PtP2<=KdStarPgStar) states: 609,123,970,566 (11)
abstracting: (KdStarGP3<=DAG) states: 718,147,499,456 (11)
abstracting: (GStarP3kP3<=DAGE) states: 642,683,648,655 (11)
-> the formula is FALSE

FORMULA Angiogenesis-PT-10-ReachabilityCardinality-4 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 5m43.982sec


Total processing time: 35m23.753sec


BK_STOP 1464786976996

--------------------
content from stderr:

check for maximal unmarked siphon
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m 0.000sec

3968 3382 5295 11703 17108 31307 124827 133681 131288 129623 128662
iterations count:11953 (186), effective:901 (14)

initing FirstDep: 0m 0.000sec

180762 175008 135500
iterations count:3361 (52), effective:248 (3)
61870 96818 93903 93406 126127 127033 132939 131715 139106 141563
iterations count:10711 (167), effective:865 (13)
166571
iterations count:1863 (29), effective:131 (2)
132190 106995 169231 158551
iterations count:4955 (77), effective:425 (6)
137653 131345 141917
iterations count:3399 (53), effective:261 (4)
202588 165552
iterations count:2985 (46), effective:250 (3)

iterations count:961 (15), effective:70 (1)
16127 50860 69614 74713 74934 124465 114951 130556 129749 133009
iterations count:10666 (166), effective:881 (13)
122022 131836 170192 154511 166869 159458 157566
iterations count:7425 (116), effective:623 (9)
146618
iterations count:1261 (19), effective:81 (1)
41936 53463 81964 128299 114528 106873 104355 127750 158423 177246 165832 157301 150459
iterations count:13353 (208), effective:1101 (17)
106327 112948 152679 133565 130239 132752 133343 163099 157366
iterations count:9921 (155), effective:840 (13)
77048 65175 96438 106831 97948 99861 101667 123144 117186 130139 152537 132427
iterations count:12822 (200), effective:1094 (17)

iterations count:225 (3), effective:42 (0)
107873 149899 140763
iterations count:3971 (62), effective:354 (5)
215186 195034 171235 140168
iterations count:4073 (63), effective:394 (6)

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="S_Angiogenesis-PT-10"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="marcie"
export BK_RESULT_DIR="/users/gast00/fkordon/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/S_Angiogenesis-PT-10.tgz
mv S_Angiogenesis-PT-10 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool marcie"
echo " Input is S_Angiogenesis-PT-10, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r173kn-ebro-146433144700034"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;