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Model Checking Contest @ Petri Nets 2016
6th edition, Toruń, Poland, June 21, 2016
Execution%20of%20r173kn-ebro-146433144700025
Last Updated
June 30, 2016

About the Execution of Marcie for S_Angiogenesis-PT-05

Execution Summary
Max Memory
Used (MB)
Time wait (ms) CPU Usage (ms) I/O Wait (ms) Computed Result Execution
Status
5611.880 39826.00 39890.00 20.00 FTFFTTFFFTFTFTTF normal

Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
=====================================================================
Generated by BenchKit 2-2979
Executing tool marcie
Input is S_Angiogenesis-PT-05, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r173kn-ebro-146433144700025
=====================================================================


--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-0
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-1
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-10
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-11
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-12
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-13
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-14
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-15
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-2
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-3
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-4
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-5
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-6
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-7
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-8
FORMULA_NAME Angiogenesis-PT-05-ReachabilityCardinality-9

=== Now, execution of the tool begins

BK_START 1464784845308


Marcie rev. 8535M (built: crohr on 2016-04-27)
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: marcie --net-file=model.pnml --mcc-file=ReachabilityCardinality.xml --mcc-mode --memory=6 --suppress

parse successfull
net created successfully

Net: Angiogenesis_PT_05
(NrP: 39 NrTr: 64 NrArc: 185)

net check time: 0m 0.000sec

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.000sec

init dd package: 0m 6.038sec


RS generation: 0m 0.903sec


-> reachability set: #nodes 10921 (1.1e+04) #states 42,734,935 (7)



starting MCC model checker
--------------------------

checking: AG [~ [~ [KdStarGStarP3kStarP3P2<=Pg]]]
normalized: ~ [E [true U ~ [KdStarGStarP3kStarP3P2<=Pg]]]

abstracting: (KdStarGStarP3kStarP3P2<=Pg) states: 42,718,733 (7)
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-2 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 2.654sec

checking: EF [~ [~ [[KdStarPgStarP2<=KdStarGStarP3kP3 & 3<=DAGE]]]]
normalized: E [true U [KdStarPgStarP2<=KdStarGStarP3kP3 & 3<=DAGE]]

abstracting: (3<=DAGE) states: 719,420 (5)
abstracting: (KdStarPgStarP2<=KdStarGStarP3kP3) states: 37,674,103 (7)
-> the formula is TRUE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-8 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.706sec

checking: EF [[~ [[GStarP3<=AktP3 | 1<=Pg]] & 2<=KdStarGStarPgStarP3]]
normalized: E [true U [2<=KdStarGStarPgStarP3 & ~ [[GStarP3<=AktP3 | 1<=Pg]]]]

abstracting: (1<=Pg) states: 39,776,484 (7)
abstracting: (GStarP3<=AktP3) states: 35,909,296 (7)
abstracting: (2<=KdStarGStarPgStarP3) states: 307,322 (5)
-> the formula is TRUE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-3 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 1.307sec

checking: AG [~ [[~ [GStarP3<=Pg] & [1<=AktP3 & 1<=KdStarGStarP3kStarP2]]]]
normalized: ~ [E [true U [[1<=AktP3 & 1<=KdStarGStarP3kStarP2] & ~ [GStarP3<=Pg]]]]

abstracting: (GStarP3<=Pg) states: 41,824,877 (7)
abstracting: (1<=KdStarGStarP3kStarP2) states: 4,240,836 (6)
abstracting: (1<=AktP3) states: 11,130,991 (7)
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-4 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 1.504sec

checking: AG [[KdStar<=Akt | ~ [KdStarGStarP3kP3<=PtP3]]]
normalized: ~ [E [true U ~ [[KdStar<=Akt | ~ [KdStarGStarP3kP3<=PtP3]]]]]

abstracting: (KdStarGStarP3kP3<=PtP3) states: 39,610,297 (7)
abstracting: (KdStar<=Akt) states: 38,275,067 (7)
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-6 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 3.697sec

checking: AG [~ [[1<=KdStarGStarPgP3 & [KdStarGStarP3kStarP2<=KdStarGStarPgStar | 3<=GStarP3kP3]]]]
normalized: ~ [E [true U [1<=KdStarGStarPgP3 & [KdStarGStarP3kStarP2<=KdStarGStarPgStar | 3<=GStarP3kP3]]]]

abstracting: (3<=GStarP3kP3) states: 115,195 (5)
abstracting: (KdStarGStarP3kStarP2<=KdStarGStarPgStar) states: 39,491,837 (7)
abstracting: (1<=KdStarGStarPgP3) states: 4,166,196 (6)
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-10 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.575sec

checking: AG [~ [[~ [2<=AktP3] & [2<=KdStarGStarP3kStarP3 & Pip3<=GP3]]]]
normalized: ~ [E [true U [~ [2<=AktP3] & [2<=KdStarGStarP3kStarP3 & Pip3<=GP3]]]]

abstracting: (Pip3<=GP3) states: 31,101,658 (7)
abstracting: (2<=KdStarGStarP3kStarP3) states: 314,760 (5)
abstracting: (2<=AktP3) states: 2,310,356 (6)
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-11 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 1.189sec

checking: AG [~ [[~ [KdStarGP3<=KdStarGStarPgStar] & [1<=PtP3 | 2<=DAGE]]]]
normalized: ~ [E [true U [~ [KdStarGP3<=KdStarGStarPgStar] & [1<=PtP3 | 2<=DAGE]]]]

abstracting: (2<=DAGE) states: 3,537,642 (6)
abstracting: (1<=PtP3) states: 13,507,981 (7)
abstracting: (KdStarGP3<=KdStarGStarPgStar) states: 39,596,634 (7)
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-15 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 2.674sec

checking: EF [[[[1<=KdStarGP3 & 1<=KdStarGStarP3kStarP2] | 3<=GStarP3] & ~ [[1<=KdStarGStarPgP3 & 2<=KdStarGStarP3kStarP2]]]]
normalized: E [true U [~ [[1<=KdStarGStarPgP3 & 2<=KdStarGStarP3kStarP2]] & [3<=GStarP3 | [1<=KdStarGP3 & 1<=KdStarGStarP3kStarP2]]]]

abstracting: (1<=KdStarGStarP3kStarP2) states: 4,240,836 (6)
abstracting: (1<=KdStarGP3) states: 4,136,039 (6)
abstracting: (3<=GStarP3) states: 115,195 (5)
abstracting: (2<=KdStarGStarP3kStarP2) states: 314,760 (5)
abstracting: (1<=KdStarGStarPgP3) states: 4,166,196 (6)
-> the formula is TRUE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-1 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 1.861sec

checking: AG [[KdStarGStarP3<=KdStarGStarP3kStarP3 | ~ [[2<=KdStarGP3 & Pg<=KdStarPgStarP2]]]]
normalized: ~ [E [true U ~ [[KdStarGStarP3<=KdStarGStarP3kStarP3 | ~ [[2<=KdStarGP3 & Pg<=KdStarPgStarP2]]]]]]

abstracting: (Pg<=KdStarPgStarP2) states: 4,399,847 (6)
abstracting: (2<=KdStarGP3) states: 295,939 (5)
abstracting: (KdStarGStarP3<=KdStarGStarP3kStarP3) states: 38,793,091 (7)
-> the formula is TRUE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-13 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.130sec

checking: EF [~ [[KdStarGStarP3kStarP2<=Pten | [KdStarGStarP3kStar<=KdStarGStarP3kStarP2 | KdStarGStarP3kStarP3P2<=AktP3]]]]
normalized: E [true U ~ [[KdStarGStarP3kStarP2<=Pten | [KdStarGStarP3kStar<=KdStarGStarP3kStarP2 | KdStarGStarP3kStarP3P2<=AktP3]]]]

abstracting: (KdStarGStarP3kStarP3P2<=AktP3) states: 41,767,108 (7)
abstracting: (KdStarGStarP3kStar<=KdStarGStarP3kStarP2) states: 30,915,027 (7)
abstracting: (KdStarGStarP3kStarP2<=Pten) states: 42,734,935 (7)
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-0 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.056sec

checking: EF [[[~ [KdStarGStarPgStarP3<=KdStarGStar] & ~ [PtP3<=Pip2]] & KdStarGStarPgStarP3P2<=Pip2]]
normalized: E [true U [KdStarGStarPgStarP3P2<=Pip2 & [~ [KdStarGStarPgStarP3<=KdStarGStar] & ~ [PtP3<=Pip2]]]]

abstracting: (PtP3<=Pip2) states: 32,137,941 (7)
abstracting: (KdStarGStarPgStarP3<=KdStarGStar) states: 39,566,612 (7)
abstracting: (KdStarGStarPgStarP3P2<=Pip2) states: 41,824,252 (7)
-> the formula is TRUE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-5 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.942sec

checking: AG [[~ [[KdStarGStarP3kStarP2<=KdStarGP3 & 1<=Enz]] | ~ [[Akt<=Pten & 3<=Pip3]]]]
normalized: ~ [E [true U ~ [[~ [[Akt<=Pten & 3<=Pip3]] | ~ [[KdStarGStarP3kStarP2<=KdStarGP3 & 1<=Enz]]]]]]

abstracting: (1<=Enz) states: 42,727,493 (7)
abstracting: (KdStarGStarP3kStarP2<=KdStarGP3) states: 38,793,091 (7)
abstracting: (3<=Pip3) states: 718,700 (5)
abstracting: (Akt<=Pten) states: 37,084,227 (7)
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-9 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 2.109sec

checking: EF [[[3<=KdStarGStarPgP3 & [2<=DAGE & P3k<=KdStarPgStar]] & ~ [[PtP2<=GStarPgP3 & 3<=GStarP3kP3]]]]
normalized: E [true U [~ [[PtP2<=GStarPgP3 & 3<=GStarP3kP3]] & [3<=KdStarGStarPgP3 & [2<=DAGE & P3k<=KdStarPgStar]]]]

abstracting: (P3k<=KdStarPgStar) states: 1,208,571 (6)
abstracting: (2<=DAGE) states: 3,537,642 (6)
abstracting: (3<=KdStarGStarPgP3) states: 15,826 (4)
abstracting: (3<=GStarP3kP3) states: 115,195 (5)
abstracting: (PtP2<=GStarPgP3) states: 31,003,985 (7)
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-14 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 0.113sec

checking: EF [[[~ [KdStarGP3<=Pip2] & [2<=KdStarGStarP3k | Akt<=DAG]] & [~ [KdStarPgStarP2<=PtP2] | ~ [2<=KdStarGStarPg]]]]
normalized: E [true U [[~ [2<=KdStarGStarPg] | ~ [KdStarPgStarP2<=PtP2]] & [[2<=KdStarGStarP3k | Akt<=DAG] & ~ [KdStarGP3<=Pip2]]]]

abstracting: (KdStarGP3<=Pip2) states: 39,684,472 (7)
abstracting: (Akt<=DAG) states: 10,774,506 (7)
abstracting: (2<=KdStarGStarP3k) states: 2,965,900 (6)
abstracting: (KdStarPgStarP2<=PtP2) states: 38,613,642 (7)
abstracting: (2<=KdStarGStarPg) states: 2,863,251 (6)
-> the formula is TRUE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-7 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 4.899sec

checking: EF [[~ [[3<=P3k & KdStarGStarPgP3<=DAGE]] & [[2<=Pg & KdStar<=KdStarGStarPgP3] | [2<=KdStarPgStar | 3<=KdStarGStar]]]]
normalized: E [true U [[[2<=KdStarPgStar | 3<=KdStarGStar] | [2<=Pg & KdStar<=KdStarGStarPgP3]] & ~ [[3<=P3k & KdStarGStarPgP3<=DAGE]]]]

abstracting: (KdStarGStarPgP3<=DAGE) states: 39,669,931 (7)
abstracting: (3<=P3k) states: 36,573,622 (7)
abstracting: (KdStar<=KdStarGStarPgP3) states: 26,080,643 (7)
abstracting: (2<=Pg) states: 32,306,252 (7)
abstracting: (3<=KdStarGStar) states: 512,541 (5)
abstracting: (2<=KdStarPgStar) states: 5,349,501 (6)
-> the formula is TRUE

FORMULA Angiogenesis-PT-05-ReachabilityCardinality-12 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m 3.613sec


Total processing time: 0m39.759sec


BK_STOP 1464784885134

--------------------
content from stderr:

check for maximal unmarked siphon
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m 0.000sec

1096 1888 3952 10799 10915
iterations count:5829 (91), effective:437 (6)

initing FirstDep: 0m 0.000sec

8056 10889 12657 11964
iterations count:4609 (72), effective:367 (5)
8793 11706 14163 12329
iterations count:4085 (63), effective:306 (4)
2505 5662 12519 12570
iterations count:4572 (71), effective:367 (5)
6914 9032 9454 10482 11140
iterations count:5326 (83), effective:422 (6)
11851 13422
iterations count:2404 (37), effective:184 (2)
11067
iterations count:1571 (24), effective:116 (1)
7896 12363 13924
iterations count:3623 (56), effective:269 (4)
12277 12621 13288 13748
iterations count:4485 (70), effective:353 (5)
10246 13027 14659 13096
iterations count:4588 (71), effective:350 (5)
6485 13860
iterations count:2728 (42), effective:209 (3)
16530 14011 14560
iterations count:3772 (58), effective:291 (4)
14893 13568 10874
iterations count:3807 (59), effective:305 (4)
9300 9454 11160 11483
iterations count:4868 (76), effective:422 (6)

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="S_Angiogenesis-PT-05"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="marcie"
export BK_RESULT_DIR="/users/gast00/fkordon/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/S_Angiogenesis-PT-05.tgz
mv S_Angiogenesis-PT-05 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool marcie"
echo " Input is S_Angiogenesis-PT-05, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r173kn-ebro-146433144700025"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;