Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..........
=====================================================================
Generated by BenchKit 2-2979
Executing tool tapaalPAR
Input is GPPP-PT-C1000N0000001000, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r220su-smll-146468025500583
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-0
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-1
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-10
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-11
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-12
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-13
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-14
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-15
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-2
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-3
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-4
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-5
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-6
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-7
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-8
FORMULA_NAME GPPP-PT-C1000N0000001000-ReachabilityCardinality-9

=== Now, execution of the tool begins

BK_START 1464943142701


*****************************************
TAPAAL onthefly-PAR performing ReachabilityCardinality search
*****************************************

verifypn -o mc -c 4 -n model.pnml ReachabilityCardinality.xml
GPPP-PT-C1000N0000001000-ReachabilityCardinality-0: not EF not ( (((("ADP" <= "_2PG") and ("GSH" <= "Ru5P")) or (1 <= "Lac")) or ("Lac" <= "_3PG")) )

query: EF not ( (((("ADP" <= "_2PG") and ("GSH" <= "Ru5P")) or (1 <= "Lac")) or ("Lac" <= "_3PG")) )
GPPP-PT-C1000N0000001000-ReachabilityCardinality-1: not EF not ( not(not(("GSH" <= "NADplus"))) )

query: EF not ( not(not(("GSH" <= "NADplus"))) )
GPPP-PT-C1000N0000001000-ReachabilityCardinality-2: not EF not ( ((((3 <= "G6P") or ("Pyr" <= "ATP")) and (("Gluc" <= "GSH") or ("_2PG" <= "E4P"))) or (((2 <= "GAP") and ("PEP" <= "Gluc")) and ((2 <= "b1") and ("NADH" <= "R5P")))) )

query: EF not ( ((((3 <= "G6P") or ("Pyr" <= "ATP")) and (("Gluc" <= "GSH") or ("_2PG" <= "E4P"))) or (((2 <= "GAP") and ("PEP" <= "Gluc")) and ((2 <= "b1") and ("NADH" <= "R5P")))) )
FORMULA GPPP-PT-C1000N0000001000-ReachabilityCardinality-2 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C1000N0000001000-ReachabilityCardinality-3: not EF not ( not(((("NADplus" <= "c1") and ("a2" <= "b1")) and not((2 <= "ATP")))) )

query: EF not ( not(((("NADplus" <= "c1") and ("a2" <= "b1")) and not((2 <= "ATP")))) )
GPPP-PT-C1000N0000001000-ReachabilityCardinality-4: not EF not ( (not(((1 <= "F6P") and ("a1" <= "_1_3_BPG"))) or ("Pyr" <= "a1")) )

query: EF not ( (not(((1 <= "F6P") and ("a1" <= "_1_3_BPG"))) or ("Pyr" <= "a1")) )
GPPP-PT-C1000N0000001000-ReachabilityCardinality-5: not EF not ( ((1 <= "PEP") or (not(("NADplus" <= "NADH")) or ((2 <= "a1") and ("Ru5P" <= "b2")))) )

query: EF not ( ((1 <= "PEP") or (not(("NADplus" <= "NADH")) or ((2 <= "a1") and ("Ru5P" <= "b2")))) )
GPPP-PT-C1000N0000001000-ReachabilityCardinality-6: not EF not ( (((1 <= "S7P") or (2 <= "b1")) or (((2 <= "Gluc") or ("ADP" <= "a1")) and (("_3PG" <= "S7P") or ("PEP" <= "NADplus")))) )

query: EF not ( (((1 <= "S7P") or (2 <= "b1")) or (((2 <= "Gluc") or ("ADP" <= "a1")) and (("_3PG" <= "S7P") or ("PEP" <= "NADplus")))) )
FORMULA GPPP-PT-C1000N0000001000-ReachabilityCardinality-6 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C1000N0000001000-ReachabilityCardinality-7: EF ( ((((1 <= "a1") or (2 <= "R5P")) and (("Pyr" <= "Pyr") and (3 <= "Pi"))) and (not((3 <= "NADPplus")) and (2 <= "a2"))) )

query: EF ( ((((1 <= "a1") or (2 <= "R5P")) and (("Pyr" <= "Pyr") and (3 <= "Pi"))) and (not((3 <= "NADPplus")) and (2 <= "a2"))) )
GPPP-PT-C1000N0000001000-ReachabilityCardinality-8: not EF not ( ("E4P" <= "c2") )

query: EF not ( ("E4P" <= "c2") )
GPPP-PT-C1000N0000001000-ReachabilityCardinality-9: not EF not ( not((1 <= "Lac")) )

query: EF not ( not((1 <= "Lac")) )
FORMULA GPPP-PT-C1000N0000001000-ReachabilityCardinality-9 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C1000N0000001000-ReachabilityCardinality-10: EF ( ((((3 <= "G6P") and (2 <= "DHAP")) and ((2 <= "a1") or (2 <= "NADPH"))) and (not((1 <= "NADPH")) and not(("GAP" <= "FBP")))) )

query: EF ( ((((3 <= "G6P") and (2 <= "DHAP")) and ((2 <= "a1") or (2 <= "NADPH"))) and (not((1 <= "NADPH")) and not(("GAP" <= "FBP")))) )
FORMULA GPPP-PT-C1000N0000001000-ReachabilityCardinality-10 TRUE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is satisfied.

GPPP-PT-C1000N0000001000-ReachabilityCardinality-11: not EF not ( (((("start" <= "b1") or (1 <= "FBP")) or not((3 <= "FBP"))) and ((2 <= "_3PG") or (2 <= "NADPplus"))) )

query: EF not ( (((("start" <= "b1") or (1 <= "FBP")) or not((3 <= "FBP"))) and ((2 <= "_3PG") or (2 <= "NADPplus"))) )
FORMULA GPPP-PT-C1000N0000001000-ReachabilityCardinality-11 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C1000N0000001000-ReachabilityCardinality-12: not EF not ( ("Ru5P" <= "Ru5P") )

query: EF not ( ("Ru5P" <= "Ru5P") )
GPPP-PT-C1000N0000001000-ReachabilityCardinality-13: not EF not ( (((3 <= "c1") or ((1 <= "Ru5P") or (1 <= "_2PG"))) or (3 <= "b2")) )

query: EF not ( (((3 <= "c1") or ((1 <= "Ru5P") or (1 <= "_2PG"))) or (3 <= "b2")) )
FORMULA GPPP-PT-C1000N0000001000-ReachabilityCardinality-13 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C1000N0000001000-ReachabilityCardinality-14: EF ( (2 <= "R5P") )

query: EF ( (2 <= "R5P") )
GPPP-PT-C1000N0000001000-ReachabilityCardinality-15: not EF not ( not(not((("Xu5P" <= "FBP") or (2 <= "ADP")))) )

query: EF not ( not(not((("Xu5P" <= "FBP") or (2 <= "ADP")))) )
GPPP-PT-C1000N0000001000-ReachabilityCardinality-0: not EF not ( (((("ADP" <= "_2PG") and ("GSH" <= "Ru5P")) or (1 <= "Lac")) or ("Lac" <= "_3PG")) )


BK_STOP 1464943686532

--------------------
content from stderr:

terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
/home/mcc/BenchKit/bin/onthefly.sh: line 24: 663 Aborted $VERIFYPN/verifypn-linux64 $1 -d "model.pnml" $2

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C1000N0000001000"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="tapaalPAR"
export BK_RESULT_DIR="/root/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C1000N0000001000.tgz
mv GPPP-PT-C1000N0000001000 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool tapaalPAR"
echo " Input is GPPP-PT-C1000N0000001000, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r220su-smll-146468025500583"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;