Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.....................................
=====================================================================
Generated by BenchKit 2-2979
Executing tool tapaalPAR
Input is GPPP-PT-C1000N0000000100, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r220su-smll-146468025500574
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-0
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-1
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-10
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-11
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-12
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-13
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-14
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-15
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-2
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-3
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-4
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-5
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-6
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-7
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-8
FORMULA_NAME GPPP-PT-C1000N0000000100-ReachabilityCardinality-9

=== Now, execution of the tool begins

BK_START 1464942525931


*****************************************
TAPAAL onthefly-PAR performing ReachabilityCardinality search
*****************************************

verifypn -o mc -c 4 -n model.pnml ReachabilityCardinality.xml
GPPP-PT-C1000N0000000100-ReachabilityCardinality-0: EF ( (((("NADplus" <= "a1") or (2 <= "c1")) or ("NADplus" <= "E4P")) and (("NADPplus" <= "G6P") and not((2 <= "FBP")))) )

query: EF ( (((("NADplus" <= "a1") or (2 <= "c1")) or ("NADplus" <= "E4P")) and (("NADPplus" <= "G6P") and not((2 <= "FBP")))) )
GPPP-PT-C1000N0000000100-ReachabilityCardinality-1: EF ( (not((("_1_3_BPG" <= "b2") or (3 <= "_2PG"))) and ((2 <= "start") or ("Pyr" <= "c2"))) )

query: EF ( (not((("_1_3_BPG" <= "b2") or (3 <= "_2PG"))) and ((2 <= "start") or ("Pyr" <= "c2"))) )
GPPP-PT-C1000N0000000100-ReachabilityCardinality-2: EF ( ((3 <= "Xu5P") or (2 <= "Lac")) )

query: EF ( ((3 <= "Xu5P") or (2 <= "Lac")) )
FORMULA GPPP-PT-C1000N0000000100-ReachabilityCardinality-2 TRUE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is satisfied.

GPPP-PT-C1000N0000000100-ReachabilityCardinality-3: not EF not ( not((2 <= "S7P")) )

query: EF not ( not((2 <= "S7P")) )
GPPP-PT-C1000N0000000100-ReachabilityCardinality-4: not EF not ( not(not(((1 <= "c2") or (1 <= "GSSG")))) )

query: EF not ( not(not(((1 <= "c2") or (1 <= "GSSG")))) )
GPPP-PT-C1000N0000000100-ReachabilityCardinality-5: EF ( ((1 <= "c2") and (((1 <= "c2") and (1 <= "b1")) and (("b1" <= "E4P") and (3 <= "NADPH")))) )

query: EF ( ((1 <= "c2") and (((1 <= "c2") and (1 <= "b1")) and (("b1" <= "E4P") and (3 <= "NADPH")))) )
GPPP-PT-C1000N0000000100-ReachabilityCardinality-6: EF ( ((((1 <= "NADH") and (3 <= "Lac")) and (("GSSG" <= "S7P") and (1 <= "DHAP"))) and ("Ru5P" <= "NADPplus")) )

query: EF ( ((((1 <= "NADH") and (3 <= "Lac")) and (("GSSG" <= "S7P") and (1 <= "DHAP"))) and ("Ru5P" <= "NADPplus")) )
GPPP-PT-C1000N0000000100-ReachabilityCardinality-7: not EF not ( ((not((2 <= "Xu5P")) or not((2 <= "c2"))) or not(not(("ATP" <= "_3PG")))) )

query: EF not ( ((not((2 <= "Xu5P")) or not((2 <= "c2"))) or not(not(("ATP" <= "_3PG")))) )
FORMULA GPPP-PT-C1000N0000000100-ReachabilityCardinality-7 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C1000N0000000100-ReachabilityCardinality-8: EF ( (3 <= "start") )

query: EF ( (3 <= "start") )
GPPP-PT-C1000N0000000100-ReachabilityCardinality-9: EF ( (("NADPplus" <= "c1") and (("GSSG" <= "F6P") and ((1 <= "Pyr") or ("NADPplus" <= "_3PG")))) )

query: EF ( (("NADPplus" <= "c1") and (("GSSG" <= "F6P") and ((1 <= "Pyr") or ("NADPplus" <= "_3PG")))) )
GPPP-PT-C1000N0000000100-ReachabilityCardinality-10: EF ( ("ATP" <= "_1_3_BPG") )

query: EF ( ("ATP" <= "_1_3_BPG") )
FORMULA GPPP-PT-C1000N0000000100-ReachabilityCardinality-10 TRUE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is satisfied.

GPPP-PT-C1000N0000000100-ReachabilityCardinality-11: EF ( not((((1 <= "a1") or (2 <= "Pyr")) or (3 <= "ATP"))) )

query: EF ( not((((1 <= "a1") or (2 <= "Pyr")) or (3 <= "ATP"))) )
FORMULA GPPP-PT-C1000N0000000100-ReachabilityCardinality-11 TRUE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is satisfied.

GPPP-PT-C1000N0000000100-ReachabilityCardinality-12: not EF not ( ((3 <= "DHAP") or ((2 <= "Pyr") or (("_2PG" <= "GAP") or (3 <= "Pi")))) )

query: EF not ( ((3 <= "DHAP") or ((2 <= "Pyr") or (("_2PG" <= "GAP") or (3 <= "Pi")))) )
GPPP-PT-C1000N0000000100-ReachabilityCardinality-13: EF ( (("Pyr" <= "ADP") and (1 <= "Lac")) )

query: EF ( (("Pyr" <= "ADP") and (1 <= "Lac")) )
FORMULA GPPP-PT-C1000N0000000100-ReachabilityCardinality-13 TRUE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is satisfied.

GPPP-PT-C1000N0000000100-ReachabilityCardinality-14: EF ( not((((3 <= "ATP") or (2 <= "Ru5P")) and ("Pyr" <= "Gluc"))) )

query: EF ( not((((3 <= "ATP") or (2 <= "Ru5P")) and ("Pyr" <= "Gluc"))) )
FORMULA GPPP-PT-C1000N0000000100-ReachabilityCardinality-14 TRUE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is satisfied.

GPPP-PT-C1000N0000000100-ReachabilityCardinality-15: not EF not ( not((3 <= "NADH")) )

query: EF not ( not((3 <= "NADH")) )
FORMULA GPPP-PT-C1000N0000000100-ReachabilityCardinality-15 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C1000N0000000100-ReachabilityCardinality-0: EF ( (((("NADplus" <= "a1") or (2 <= "c1")) or ("NADplus" <= "E4P")) and (("NADPplus" <= "G6P") and not((2 <= "FBP")))) )


BK_STOP 1464943057741

--------------------
content from stderr:

terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
/home/mcc/BenchKit/bin/onthefly.sh: line 24: 674 Aborted $VERIFYPN/verifypn-linux64 $1 -d "model.pnml" $2

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C1000N0000000100"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="tapaalPAR"
export BK_RESULT_DIR="/root/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C1000N0000000100.tgz
mv GPPP-PT-C1000N0000000100 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool tapaalPAR"
echo " Input is GPPP-PT-C1000N0000000100, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r220su-smll-146468025500574"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;