Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..............
=====================================================================
Generated by BenchKit 2-2979
Executing tool tapaalPAR
Input is GPPP-PT-C0010N0000000100, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r220su-smll-146468025300502
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-0
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-1
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-10
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-11
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-12
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-13
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-14
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-15
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-2
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-3
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-4
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-5
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-6
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-7
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-8
FORMULA_NAME GPPP-PT-C0010N0000000100-ReachabilityCardinality-9

=== Now, execution of the tool begins

BK_START 1464938183574


*****************************************
TAPAAL onthefly-PAR performing ReachabilityCardinality search
*****************************************

verifypn -o mc -c 4 -n model.pnml ReachabilityCardinality.xml
GPPP-PT-C0010N0000000100-ReachabilityCardinality-0: not EF not ( (1 <= "NADPplus") )

query: EF not ( (1 <= "NADPplus") )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-1: EF ( ((not(("_3PG" <= "G6P")) or ((2 <= "S7P") and (1 <= "_1_3_BPG"))) and ((("ADP" <= "_2PG") and ("a1" <= "GSSG")) or (2 <= "E4P"))) )

query: EF ( ((not(("_3PG" <= "G6P")) or ((2 <= "S7P") and (1 <= "_1_3_BPG"))) and ((("ADP" <= "_2PG") and ("a1" <= "GSSG")) or (2 <= "E4P"))) )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-2: not EF not ( ((("Pyr" <= "c2") and ((1 <= "b1") or ("DHAP" <= "_3PG"))) or ((("FBP" <= "c2") and ("Pyr" <= "F6P")) and ("_3PG" <= "S7P"))) )

query: EF not ( ((("Pyr" <= "c2") and ((1 <= "b1") or ("DHAP" <= "_3PG"))) or ((("FBP" <= "c2") and ("Pyr" <= "F6P")) and ("_3PG" <= "S7P"))) )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-3: EF ( ((((3 <= "PEP") or ("b2" <= "start")) and ((2 <= "F6P") or ("a2" <= "Pi"))) and (not(("Pyr" <= "FBP")) or (("b1" <= "Xu5P") or (3 <= "E4P")))) )

query: EF ( ((((3 <= "PEP") or ("b2" <= "start")) and ((2 <= "F6P") or ("a2" <= "Pi"))) and (not(("Pyr" <= "FBP")) or (("b1" <= "Xu5P") or (3 <= "E4P")))) )
FORMULA GPPP-PT-C0010N0000000100-ReachabilityCardinality-3 TRUE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is satisfied.

GPPP-PT-C0010N0000000100-ReachabilityCardinality-4: EF ( (("a2" <= "NADH") and ((1 <= "E4P") and ((1 <= "Lac") and (2 <= "R5P")))) )

query: EF ( (("a2" <= "NADH") and ((1 <= "E4P") and ((1 <= "Lac") and (2 <= "R5P")))) )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-5: EF ( ("NADPplus" <= "_1_3_BPG") )

query: EF ( ("NADPplus" <= "_1_3_BPG") )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-6: not EF not ( ("E4P" <= "GSSG") )

query: EF not ( ("E4P" <= "GSSG") )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-7: EF ( ("NADPplus" <= "GAP") )

query: EF ( ("NADPplus" <= "GAP") )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-8: not EF not ( (((("FBP" <= "R5P") or (3 <= "F6P")) and (("NADPplus" <= "GSH") or (2 <= "G6P"))) or ("E4P" <= "Gluc")) )

query: EF not ( (((("FBP" <= "R5P") or (3 <= "F6P")) and (("NADPplus" <= "GSH") or (2 <= "G6P"))) or ("E4P" <= "Gluc")) )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-9: not EF not ( (((("GAP" <= "a1") or ("S7P" <= "GSH")) or ((3 <= "b2") and (3 <= "ATP"))) or (2 <= "NADPH")) )

query: EF not ( (((("GAP" <= "a1") or ("S7P" <= "GSH")) or ((3 <= "b2") and (3 <= "ATP"))) or (2 <= "NADPH")) )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-10: EF ( (not(("GSH" <= "FBP")) and (((2 <= "NADH") and (1 <= "NADH")) and (("b2" <= "G6P") and ("NADPH" <= "c1")))) )

query: EF ( (not(("GSH" <= "FBP")) and (((2 <= "NADH") and (1 <= "NADH")) and (("b2" <= "G6P") and ("NADPH" <= "c1")))) )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-11: not EF not ( (("_1_3_BPG" <= "DHAP") and ((("b2" <= "ADP") and (2 <= "Gluc")) or not((2 <= "NADH")))) )

query: EF not ( (("_1_3_BPG" <= "DHAP") and ((("b2" <= "ADP") and (2 <= "Gluc")) or not((2 <= "NADH")))) )
FORMULA GPPP-PT-C0010N0000000100-ReachabilityCardinality-11 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C0010N0000000100-ReachabilityCardinality-12: not EF not ( ((1 <= "ADP") or not(("b1" <= "Gluc"))) )

query: EF not ( ((1 <= "ADP") or not(("b1" <= "Gluc"))) )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-13: not EF not ( (((("R5P" <= "GSH") or ("Pyr" <= "a1")) or ((3 <= "Gluc") and (2 <= "_2PG"))) and ("Lac" <= "R5P")) )

query: EF not ( (((("R5P" <= "GSH") or ("Pyr" <= "a1")) or ((3 <= "Gluc") and (2 <= "_2PG"))) and ("Lac" <= "R5P")) )
FORMULA GPPP-PT-C0010N0000000100-ReachabilityCardinality-13 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C0010N0000000100-ReachabilityCardinality-14: not EF not ( (not(("b1" <= "start")) or ((("Xu5P" <= "GSH") and (3 <= "b2")) or (3 <= "start"))) )

query: EF not ( (not(("b1" <= "start")) or ((("Xu5P" <= "GSH") and (3 <= "b2")) or (3 <= "start"))) )
FORMULA GPPP-PT-C0010N0000000100-ReachabilityCardinality-14 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C0010N0000000100-ReachabilityCardinality-15: EF ( (((("E4P" <= "NADH") and (1 <= "Ru5P")) and ("Pi" <= "E4P")) and ((3 <= "GSH") and not(("NADH" <= "NADPH")))) )

query: EF ( (((("E4P" <= "NADH") and (1 <= "Ru5P")) and ("Pi" <= "E4P")) and ((3 <= "GSH") and not(("NADH" <= "NADPH")))) )
GPPP-PT-C0010N0000000100-ReachabilityCardinality-0: not EF not ( (1 <= "NADPplus") )


BK_STOP 1464938728375

--------------------
content from stderr:

terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
/home/mcc/BenchKit/bin/onthefly.sh: line 24: 676 Aborted $VERIFYPN/verifypn-linux64 $1 -d "model.pnml" $2

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0010N0000000100"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="tapaalPAR"
export BK_RESULT_DIR="/root/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0010N0000000100.tgz
mv GPPP-PT-C0010N0000000100 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool tapaalPAR"
echo " Input is GPPP-PT-C0010N0000000100, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r220su-smll-146468025300502"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;