Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...........
=====================================================================
Generated by BenchKit 2-2979
Executing tool tapaalPAR
Input is GPPP-PT-C0001N0000100000, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r220su-smll-146468025300484
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-0
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-1
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-10
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-11
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-12
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-13
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-14
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-15
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-2
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-3
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-4
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-5
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-6
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-7
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-8
FORMULA_NAME GPPP-PT-C0001N0000100000-ReachabilityCardinality-9

=== Now, execution of the tool begins

BK_START 1464937113537


*****************************************
TAPAAL onthefly-PAR performing ReachabilityCardinality search
*****************************************

verifypn -o mc -c 4 -n model.pnml ReachabilityCardinality.xml
GPPP-PT-C0001N0000100000-ReachabilityCardinality-0: EF ( (("ATP" <= "b1") and ((("b1" <= "NADH") or ("NADplus" <= "GAP")) or (("ATP" <= "_3PG") or ("Gluc" <= "NADPplus")))) )

query: EF ( (("ATP" <= "b1") and ((("b1" <= "NADH") or ("NADplus" <= "GAP")) or (("ATP" <= "_3PG") or ("Gluc" <= "NADPplus")))) )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-1: EF ( ("NADPplus" <= "Gluc") )

query: EF ( ("NADPplus" <= "Gluc") )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-2: EF ( (("PEP" <= "Pi") and not((("start" <= "ATP") or ("NADPH" <= "GAP")))) )

query: EF ( (("PEP" <= "Pi") and not((("start" <= "ATP") or ("NADPH" <= "GAP")))) )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-3: EF ( (not(((2 <= "Ru5P") or (1 <= "NADPplus"))) and (((2 <= "DHAP") and (1 <= "G6P")) or not((3 <= "ATP")))) )

query: EF ( (not(((2 <= "Ru5P") or (1 <= "NADPplus"))) and (((2 <= "DHAP") and (1 <= "G6P")) or not((3 <= "ATP")))) )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-4: not EF not ( ("Ru5P" <= "GSSG") )

query: EF not ( ("Ru5P" <= "GSSG") )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-5: EF ( (not((2 <= "NADplus")) and (((2 <= "_2PG") and ("Ru5P" <= "PEP")) or ("GSH" <= "_1_3_BPG"))) )

query: EF ( (not((2 <= "NADplus")) and (((2 <= "_2PG") and ("Ru5P" <= "PEP")) or ("GSH" <= "_1_3_BPG"))) )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-6: EF ( (("b2" <= "GSSG") and (not((2 <= "GSSG")) and (("FBP" <= "ATP") and ("Xu5P" <= "GSH")))) )

query: EF ( (("b2" <= "GSSG") and (not((2 <= "GSSG")) and (("FBP" <= "ATP") and ("Xu5P" <= "GSH")))) )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-7: EF ( ((((2 <= "PEP") or ("a1" <= "Ru5P")) and ((1 <= "start") and ("PEP" <= "c1"))) and (1 <= "NADPH")) )

query: EF ( ((((2 <= "PEP") or ("a1" <= "Ru5P")) and ((1 <= "start") and ("PEP" <= "c1"))) and (1 <= "NADPH")) )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-8: not EF not ( ((("Lac" <= "c1") or ("Ru5P" <= "a1")) or ((("Xu5P" <= "NADH") or ("_3PG" <= "ATP")) and not((2 <= "ADP")))) )

query: EF not ( ((("Lac" <= "c1") or ("Ru5P" <= "a1")) or ((("Xu5P" <= "NADH") or ("_3PG" <= "ATP")) and not((2 <= "ADP")))) )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-9: not EF not ( (("NADPH" <= "ADP") or (((2 <= "a2") and ("c1" <= "a2")) or (("F6P" <= "b2") or (2 <= "c1")))) )

query: EF not ( (("NADPH" <= "ADP") or (((2 <= "a2") and ("c1" <= "a2")) or (("F6P" <= "b2") or (2 <= "c1")))) )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-10: not EF not ( ((((2 <= "_3PG") and (2 <= "ADP")) and (("GSSG" <= "ATP") and ("E4P" <= "PEP"))) or ((("DHAP" <= "ATP") or (2 <= "start")) or ((2 <= "Pyr") or ("NADplus" <= "c1")))) )

query: EF not ( ((((2 <= "_3PG") and (2 <= "ADP")) and (("GSSG" <= "ATP") and ("E4P" <= "PEP"))) or ((("DHAP" <= "ATP") or (2 <= "start")) or ((2 <= "Pyr") or ("NADplus" <= "c1")))) )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-11: EF ( ("NADPplus" <= "_1_3_BPG") )

query: EF ( ("NADPplus" <= "_1_3_BPG") )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-12: not EF not ( (((("_2PG" <= "R5P") or ("DHAP" <= "b1")) and (("ATP" <= "c2") or ("start" <= "F6P"))) or (not((1 <= "Pi")) and (("DHAP" <= "b1") and ("GSH" <= "ADP")))) )

query: EF not ( (((("_2PG" <= "R5P") or ("DHAP" <= "b1")) and (("ATP" <= "c2") or ("start" <= "F6P"))) or (not((1 <= "Pi")) and (("DHAP" <= "b1") and ("GSH" <= "ADP")))) )
FORMULA GPPP-PT-C0001N0000100000-ReachabilityCardinality-12 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C0001N0000100000-ReachabilityCardinality-13: EF ( ((1 <= "start") and (((2 <= "Ru5P") or ("NADplus" <= "_2PG")) and (("NADplus" <= "a2") and (3 <= "_1_3_BPG")))) )

query: EF ( ((1 <= "start") and (((2 <= "Ru5P") or ("NADplus" <= "_2PG")) and (("NADplus" <= "a2") and (3 <= "_1_3_BPG")))) )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-14: EF ( ((3 <= "Xu5P") or ((("ATP" <= "_2PG") or (3 <= "S7P")) or not((1 <= "GSSG")))) )

query: EF ( ((3 <= "Xu5P") or ((("ATP" <= "_2PG") or (3 <= "S7P")) or not((1 <= "GSSG")))) )
GPPP-PT-C0001N0000100000-ReachabilityCardinality-15: not EF not ( not(((("F6P" <= "DHAP") and ("G6P" <= "GSH")) and ((3 <= "c1") and (2 <= "NADH")))) )

query: EF not ( not(((("F6P" <= "DHAP") and ("G6P" <= "GSH")) and ((3 <= "c1") and (2 <= "NADH")))) )
FORMULA GPPP-PT-C0001N0000100000-ReachabilityCardinality-15 FALSE TECHNIQUES PARALLEL_PROCESSING EXPLICIT STRUCTURAL_REDUCTION

Query is NOT satisfied.

GPPP-PT-C0001N0000100000-ReachabilityCardinality-0: EF ( (("ATP" <= "b1") and ((("b1" <= "NADH") or ("NADplus" <= "GAP")) or (("ATP" <= "_3PG") or ("Gluc" <= "NADPplus")))) )


BK_STOP 1464937533659

--------------------
content from stderr:

terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
/home/mcc/BenchKit/bin/onthefly.sh: line 24: 670 Aborted $VERIFYPN/verifypn-linux64 $1 -d "model.pnml" $2

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0001N0000100000"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="tapaalPAR"
export BK_RESULT_DIR="/root/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0001N0000100000.tgz
mv GPPP-PT-C0001N0000100000 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool tapaalPAR"
echo " Input is GPPP-PT-C0001N0000100000, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r220su-smll-146468025300484"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;