Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
....................
=====================================================================
Generated by BenchKit 2-2979
Executing tool itstools
Input is DES-PT-02b, examination is ReachabilityDeadlock
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r217su-smll-146468017600053
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME DES-PT-02b-ReachabilityDeadlock-0

=== Now, execution of the tool begins

BK_START 1464691166632

!SESSION 2016-05-31 10:39:27.145 -----------------------------------------------
eclipse.buildId=4.5.2.M20160212-1500
java.version=1.8.0_77
java.vendor=Oracle Corporation
BootLoader constants: OS=linux, ARCH=x86_64, WS=gtk, NL=en_US
Framework arguments: -application fr.lip6.move.gal.application.pnmcc -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its
Command-line arguments: -application fr.lip6.move.gal.application.pnmcc -data /home/mcc/BenchKit//workspace -os linux -ws gtk -arch x86_64 -consoleLog -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its

!ENTRY org.eclipse.osgi 4 0 2016-05-31 10:39:30.492
!MESSAGE Application error
!STACK 1
java.lang.ArrayIndexOutOfBoundsException: -1
at org.eclipse.emf.common.util.BasicEList.get(BasicEList.java:348)
at fr.lip6.move.gal.instantiate.CompositeBuilder.galToCompositeWithPartition(CompositeBuilder.java:394)
at fr.lip6.move.gal.instantiate.CompositeBuilder.decomposeWithOrder(CompositeBuilder.java:112)
at fr.lip6.move.gal.application.Application.applyOrder(Application.java:745)
at fr.lip6.move.gal.application.Application.start(Application.java:189)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:380)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:235)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:669)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:608)
at org.eclipse.equinox.launcher.Main.run(Main.java:1515)
at org.eclipse.equinox.launcher.Main.main(Main.java:1488)
An error has occurred. See the log file
/home/mcc/BenchKit/workspace/.metadata/.log.

BK_STOP 1464691171605

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityDeadlock = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its
+ ulimit -s 65536
+ java -Dosgi.requiredJavaVersion=1.6 -XX:MaxPermSize=512m -Xss8m -Xms40m -Xmx8192m -Declipse.pde.launch=true -Dfile.encoding=UTF-8 -classpath /home/mcc/BenchKit//eclipse/plugins/org.eclipse.equinox.launcher_1.3.100.v20150511-1540.jar org.eclipse.equinox.launcher.Main -application fr.lip6.move.gal.application.pnmcc -data /home/mcc/BenchKit//workspace -os linux -ws gtk -arch x86_64 -nl en_US -consoleLog -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512m; support was removed in 8.0
May 31, 2016 10:39:29 AM fr.lip6.move.gal.application.Application transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 31, 2016 10:39:29 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 66 ms
May 31, 2016 10:39:29 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 288 places.
May 31, 2016 10:39:30 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 239 transitions.
May 31, 2016 10:39:30 AM fr.lip6.move.gal.pnml.togal.PnmlToGalTransformer transform
INFO: Found NUPN structural information;
May 31, 2016 10:39:30 AM fr.lip6.move.gal.logic.togal.ToGalTransformer toGal
WARNING: Unknown predicate type in boolean expression fr.lip6.move.gal.logic.impl.DeadlockImpl
May 31, 2016 10:39:30 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property DES-PT-02b-ReachabilityDeadlock-0 is trivially true : it is verified in initial state.
May 31, 2016 10:39:30 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 283 ms
May 31, 2016 10:39:30 AM fr.lip6.move.gal.application.Application applyOrder
INFO: Applying decomposition
May 31, 2016 10:39:30 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 31, 2016 10:39:30 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property DES-PT-02b-ReachabilityDeadlock-0 is trivially true : it is verified in initial state.
May 31, 2016 10:39:30 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 46 ms
May 31, 2016 10:39:30 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Partition obtained :[p5, p6, p7, ],[p8, p9, p10, ],[p4, ],[p11, p12, p13, ],[p3, ],[p14, p15, p16, ],[p1, p2, ],[p24, p25, p26, p27, p28, p29, p30, ],[p31, p32, p33, p34, p35, p36, p37, ],[p23, ],[p38, p39, p40, p41, p42, p43, p44, p45, p46, p47, p48, p49, p50, p51, p52, p54, ],[p22, ],[p55, p56, p57, p58, p59, p60, p61, p62, ],[p21, ],[p63, p64, p65, p66, p67, p68, p69, p70, ],[p20, ],[p71, p72, p73, p74, p75, ],[p19, ],[p78, p79, p80, ],[p83, p84, p85, p86, p87, p88, p89, p90, p91, p92, p93, p94, ],[p106, p107, ],[p108, p109, ],[p110, p111, ],[p112, p113, ],[p95, p96, p97, p98, p99, p100, p101, p102, p103, p104, p105, ],[p82, ],[p128, p129, ],[p130, p131, ],[p114, p115, p116, p117, p118, p119, p120, p121, p122, p123, p124, p125, p126, p127, ],[p81, ],[p77, ],[p132, p133, p134, ],[p76, ],[p18, ],[p140, p141, ],[p142, p143, ],[p137, p138, p139, ],[p150, p151, ],[p152, p153, ],[p147, p148, p149, ],[p166, p167, ],[p168, p169, ],[p165, ],[p170, p171, ],[p164, ],[p172, p173, ],[p163, ],[p174, p175, ],[p162, ],[p176, p177, ],[p161, ],[p178, p179, ],[p160, ],[p180, p181, ],[p157, p158, p159, ],[p189, p190, p191, ],[p192, p193, p194, ],[p188, ],[p195, p196, p197, ],[p187, ],[p198, p199, p200, ],[p186, ],[p201, p202, p203, ],[p185, ],[p204, p205, p206, ],[p184, ],[p207, p208, p209, ],[p183, ],[p210, p211, p212, ],[p182, ],[p156, ],[p223, p224, ],[p225, p226, ],[p222, ],[p227, p228, ],[p221, ],[p229, p230, ],[p220, ],[p231, p232, ],[p219, ],[p233, p234, ],[p218, ],[p235, p236, ],[p217, ],[p237, p238, ],[p239, p240, ],[p241, p242, ],[p213, p214, p215, p216, ],[p155, ],[p243, p244, p245, ],[p154, ],[p146, ],[p259, p260, ],[p261, p262, ],[p263, p264, ],[p265, p266, ],[p246, p247, p248, p249, p250, p251, p252, p253, p254, p255, p256, p257, p258, ],[p145, ],[p267, p268, p269, p270, p271, p272, p273, p274, p275, p276, p277, p278, p279, ],[p144, ],[p136, ],[p284, p285, ],[p286, p287, ],[p280, p281, p282, p283, ],[p135, ],[p17, ],[p0, ],

May 31, 2016 10:39:30 AM fr.lip6.move.gal.instantiate.CompositeBuilder$Partition getIndex
INFO: Could not find partition element corresponding to p53 in partition [p5, p6, p7, ],[p8, p9, p10, ],[p4, ],[p11, p12, p13, ],[p3, ],[p14, p15, p16, ],[p1, p2, ],[p24, p25, p26, p27, p28, p29, p30, ],[p31, p32, p33, p34, p35, p36, p37, ],[p23, ],[p38, p39, p40, p41, p42, p43, p44, p45, p46, p47, p48, p49, p50, p51, p52, p54, ],[p22, ],[p55, p56, p57, p58, p59, p60, p61, p62, ],[p21, ],[p63, p64, p65, p66, p67, p68, p69, p70, ],[p20, ],[p71, p72, p73, p74, p75, ],[p19, ],[p78, p79, p80, ],[p83, p84, p85, p86, p87, p88, p89, p90, p91, p92, p93, p94, ],[p106, p107, ],[p108, p109, ],[p110, p111, ],[p112, p113, ],[p95, p96, p97, p98, p99, p100, p101, p102, p103, p104, p105, ],[p82, ],[p128, p129, ],[p130, p131, ],[p114, p115, p116, p117, p118, p119, p120, p121, p122, p123, p124, p125, p126, p127, ],[p81, ],[p77, ],[p132, p133, p134, ],[p76, ],[p18, ],[p140, p141, ],[p142, p143, ],[p137, p138, p139, ],[p150, p151, ],[p152, p153, ],[p147, p148, p149, ],[p166, p167, ],[p168, p169, ],[p165, ],[p170, p171, ],[p164, ],[p172, p173, ],[p163, ],[p174, p175, ],[p162, ],[p176, p177, ],[p161, ],[p178, p179, ],[p160, ],[p180, p181, ],[p157, p158, p159, ],[p189, p190, p191, ],[p192, p193, p194, ],[p188, ],[p195, p196, p197, ],[p187, ],[p198, p199, p200, ],[p186, ],[p201, p202, p203, ],[p185, ],[p204, p205, p206, ],[p184, ],[p207, p208, p209, ],[p183, ],[p210, p211, p212, ],[p182, ],[p156, ],[p223, p224, ],[p225, p226, ],[p222, ],[p227, p228, ],[p221, ],[p229, p230, ],[p220, ],[p231, p232, ],[p219, ],[p233, p234, ],[p218, ],[p235, p236, ],[p217, ],[p237, p238, ],[p239, p240, ],[p241, p242, ],[p213, p214, p215, p216, ],[p155, ],[p243, p244, p245, ],[p154, ],[p146, ],[p259, p260, ],[p261, p262, ],[p263, p264, ],[p265, p266, ],[p246, p247, p248, p249, p250, p251, p252, p253, p254, p255, p256, p257, p258, ],[p145, ],[p267, p268, p269, p270, p271, p272, p273, p274, p275, p276, p277, p278, p279, ],[p144, ],[p136, ],[p284, p285, ],[p286, p287, ],[p280, p281, p282, p283, ],[p135, ],[p17, ],[p0, ],

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DES-PT-02b"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/root/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/DES-PT-02b.tgz
mv DES-PT-02b execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool itstools"
echo " Input is DES-PT-02b, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r217su-smll-146468017600053"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;