Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......
=====================================================================
Generated by BenchKit 2-2979
Executing tool itstools
Input is AutoFlight-PT-02b, examination is ReachabilityDeadlock
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r205su-blw3-146445815400197
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME AutoFlight-PT-02b-ReachabilityDeadlock-0

=== Now, execution of the tool begins

BK_START 1464469273428

!SESSION 2016-05-28 21:01:13.746 -----------------------------------------------
eclipse.buildId=4.5.2.M20160212-1500
java.version=1.8.0_77
java.vendor=Oracle Corporation
BootLoader constants: OS=linux, ARCH=x86_64, WS=gtk, NL=en_US
Framework arguments: -application fr.lip6.move.gal.application.pnmcc -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its
Command-line arguments: -application fr.lip6.move.gal.application.pnmcc -data /home/mcc/BenchKit//workspace -os linux -ws gtk -arch x86_64 -consoleLog -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its

!ENTRY org.eclipse.osgi 4 0 2016-05-28 21:01:16.064
!MESSAGE Application error
!STACK 1
java.lang.ArrayIndexOutOfBoundsException: -1
at org.eclipse.emf.common.util.BasicEList.get(BasicEList.java:348)
at fr.lip6.move.gal.instantiate.CompositeBuilder.galToCompositeWithPartition(CompositeBuilder.java:394)
at fr.lip6.move.gal.instantiate.CompositeBuilder.decomposeWithOrder(CompositeBuilder.java:112)
at fr.lip6.move.gal.application.Application.applyOrder(Application.java:745)
at fr.lip6.move.gal.application.Application.start(Application.java:189)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:380)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:235)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:669)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:608)
at org.eclipse.equinox.launcher.Main.run(Main.java:1515)
at org.eclipse.equinox.launcher.Main.main(Main.java:1488)
An error has occurred. See the log file
/home/mcc/BenchKit/workspace/.metadata/.log.

BK_STOP 1464469276319

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ ReachabilityDeadlock = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its
+ ulimit -s 65536
+ java -Dosgi.requiredJavaVersion=1.6 -XX:MaxPermSize=512m -Xss8m -Xms40m -Xmx8192m -Declipse.pde.launch=true -Dfile.encoding=UTF-8 -classpath /home/mcc/BenchKit//eclipse/plugins/org.eclipse.equinox.launcher_1.3.100.v20150511-1540.jar org.eclipse.equinox.launcher.Main -application fr.lip6.move.gal.application.pnmcc -data /home/mcc/BenchKit//workspace -os linux -ws gtk -arch x86_64 -nl en_US -consoleLog -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512m; support was removed in 8.0
May 28, 2016 9:01:15 PM fr.lip6.move.gal.application.Application transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 28, 2016 9:01:15 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 47 ms
May 28, 2016 9:01:15 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 206 places.
May 28, 2016 9:01:15 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 204 transitions.
May 28, 2016 9:01:15 PM fr.lip6.move.gal.pnml.togal.PnmlToGalTransformer transform
INFO: Found NUPN structural information;
May 28, 2016 9:01:15 PM fr.lip6.move.gal.logic.togal.ToGalTransformer toGal
WARNING: Unknown predicate type in boolean expression fr.lip6.move.gal.logic.impl.DeadlockImpl
May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property AutoFlight-PT-02b-ReachabilityDeadlock-0 is trivially true : it is verified in initial state.
May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 77 ms
May 28, 2016 9:01:15 PM fr.lip6.move.gal.application.Application applyOrder
INFO: Applying decomposition
May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property AutoFlight-PT-02b-ReachabilityDeadlock-0 is trivially true : it is verified in initial state.
May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 32 ms
May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Partition obtained :[p12, p13, p14, p15, p16, p17, p18, p19, p20, p21, p22, ],[p23, p24, p25, p26, p27, p28, p29, p30, p31, p32, p33, ],[p11, ],[p34, p35, p36, p37, p38, p39, p40, p41, p42, p43, p44, p45, p46, p47, p48, p50, ],[p10, ],[p51, p52, p53, p54, p55, p56, p57, p58, p59, p60, p61, ],[p9, ],[p62, p63, p64, p65, p66, p67, p68, p69, p70, p71, p72, ],[p8, ],[p73, p74, p75, p76, p77, p78, p79, p80, p81, p82, p83, p84, p85, p86, p87, p89, ],[p7, ],[p90, p91, p92, p93, p94, p95, p96, p97, p98, p99, p100, p101, p102, ],[p6, ],[p103, p104, p105, p106, ],[p5, ],[p107, p108, p109, p110, p111, p112, p113, p114, p115, p116, p117, p118, p119, ],[p4, ],[p120, p121, p122, p123, ],[p3, ],[p128, p129, p130, p131, p132, p133, p134, p135, p136, p137, p138, p139, p140, p141, p142, p144, p145, p146, p147, p148, p149, p150, p151, ],[p152, p153, p154, p155, p156, p157, p158, p159, p160, p161, p162, p163, p164, p165, p166, ],[p127, ],[p168, p169, p170, p171, p172, p173, p174, p175, p176, p177, p178, p179, p180, p181, p182, p184, ],[p126, ],[p185, p186, p187, p188, p189, p190, p191, p192, p193, p194, p195, p196, p197, p198, p199, p201, ],[p125, ],[p202, p203, p204, p205, ],[p124, ],[p0, p1, p2, ],

May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.CompositeBuilder$Partition getIndex
INFO: Could not find partition element corresponding to p49 in partition [p12, p13, p14, p15, p16, p17, p18, p19, p20, p21, p22, ],[p23, p24, p25, p26, p27, p28, p29, p30, p31, p32, p33, ],[p11, ],[p34, p35, p36, p37, p38, p39, p40, p41, p42, p43, p44, p45, p46, p47, p48, p50, ],[p10, ],[p51, p52, p53, p54, p55, p56, p57, p58, p59, p60, p61, ],[p9, ],[p62, p63, p64, p65, p66, p67, p68, p69, p70, p71, p72, ],[p8, ],[p73, p74, p75, p76, p77, p78, p79, p80, p81, p82, p83, p84, p85, p86, p87, p89, ],[p7, ],[p90, p91, p92, p93, p94, p95, p96, p97, p98, p99, p100, p101, p102, ],[p6, ],[p103, p104, p105, p106, ],[p5, ],[p107, p108, p109, p110, p111, p112, p113, p114, p115, p116, p117, p118, p119, ],[p4, ],[p120, p121, p122, p123, ],[p3, ],[p128, p129, p130, p131, p132, p133, p134, p135, p136, p137, p138, p139, p140, p141, p142, p144, p145, p146, p147, p148, p149, p150, p151, ],[p152, p153, p154, p155, p156, p157, p158, p159, p160, p161, p162, p163, p164, p165, p166, ],[p127, ],[p168, p169, p170, p171, p172, p173, p174, p175, p176, p177, p178, p179, p180, p181, p182, p184, ],[p126, ],[p185, p186, p187, p188, p189, p190, p191, p192, p193, p194, p195, p196, p197, p198, p199, p201, ],[p125, ],[p202, p203, p204, p205, ],[p124, ],[p0, p1, p2, ],

May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.CompositeBuilder$Partition getIndex
INFO: Could not find partition element corresponding to p88 in partition [p12, p13, p14, p15, p16, p17, p18, p19, p20, p21, p22, ],[p23, p24, p25, p26, p27, p28, p29, p30, p31, p32, p33, ],[p11, ],[p34, p35, p36, p37, p38, p39, p40, p41, p42, p43, p44, p45, p46, p47, p48, p50, ],[p10, ],[p51, p52, p53, p54, p55, p56, p57, p58, p59, p60, p61, ],[p9, ],[p62, p63, p64, p65, p66, p67, p68, p69, p70, p71, p72, ],[p8, ],[p73, p74, p75, p76, p77, p78, p79, p80, p81, p82, p83, p84, p85, p86, p87, p89, ],[p7, ],[p90, p91, p92, p93, p94, p95, p96, p97, p98, p99, p100, p101, p102, ],[p6, ],[p103, p104, p105, p106, ],[p5, ],[p107, p108, p109, p110, p111, p112, p113, p114, p115, p116, p117, p118, p119, ],[p4, ],[p120, p121, p122, p123, ],[p3, ],[p128, p129, p130, p131, p132, p133, p134, p135, p136, p137, p138, p139, p140, p141, p142, p144, p145, p146, p147, p148, p149, p150, p151, ],[p152, p153, p154, p155, p156, p157, p158, p159, p160, p161, p162, p163, p164, p165, p166, ],[p127, ],[p168, p169, p170, p171, p172, p173, p174, p175, p176, p177, p178, p179, p180, p181, p182, p184, ],[p126, ],[p185, p186, p187, p188, p189, p190, p191, p192, p193, p194, p195, p196, p197, p198, p199, p201, ],[p125, ],[p202, p203, p204, p205, ],[p124, ],[p0, p1, p2, ],

May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.CompositeBuilder$Partition getIndex
INFO: Could not find partition element corresponding to p143 in partition [p12, p13, p14, p15, p16, p17, p18, p19, p20, p21, p22, ],[p23, p24, p25, p26, p27, p28, p29, p30, p31, p32, p33, ],[p11, ],[p34, p35, p36, p37, p38, p39, p40, p41, p42, p43, p44, p45, p46, p47, p48, p50, ],[p10, ],[p51, p52, p53, p54, p55, p56, p57, p58, p59, p60, p61, ],[p9, ],[p62, p63, p64, p65, p66, p67, p68, p69, p70, p71, p72, ],[p8, ],[p73, p74, p75, p76, p77, p78, p79, p80, p81, p82, p83, p84, p85, p86, p87, p89, ],[p7, ],[p90, p91, p92, p93, p94, p95, p96, p97, p98, p99, p100, p101, p102, ],[p6, ],[p103, p104, p105, p106, ],[p5, ],[p107, p108, p109, p110, p111, p112, p113, p114, p115, p116, p117, p118, p119, ],[p4, ],[p120, p121, p122, p123, ],[p3, ],[p128, p129, p130, p131, p132, p133, p134, p135, p136, p137, p138, p139, p140, p141, p142, p144, p145, p146, p147, p148, p149, p150, p151, ],[p152, p153, p154, p155, p156, p157, p158, p159, p160, p161, p162, p163, p164, p165, p166, ],[p127, ],[p168, p169, p170, p171, p172, p173, p174, p175, p176, p177, p178, p179, p180, p181, p182, p184, ],[p126, ],[p185, p186, p187, p188, p189, p190, p191, p192, p193, p194, p195, p196, p197, p198, p199, p201, ],[p125, ],[p202, p203, p204, p205, ],[p124, ],[p0, p1, p2, ],

May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.CompositeBuilder$Partition getIndex
INFO: Could not find partition element corresponding to p167 in partition [p12, p13, p14, p15, p16, p17, p18, p19, p20, p21, p22, ],[p23, p24, p25, p26, p27, p28, p29, p30, p31, p32, p33, ],[p11, ],[p34, p35, p36, p37, p38, p39, p40, p41, p42, p43, p44, p45, p46, p47, p48, p50, ],[p10, ],[p51, p52, p53, p54, p55, p56, p57, p58, p59, p60, p61, ],[p9, ],[p62, p63, p64, p65, p66, p67, p68, p69, p70, p71, p72, ],[p8, ],[p73, p74, p75, p76, p77, p78, p79, p80, p81, p82, p83, p84, p85, p86, p87, p89, ],[p7, ],[p90, p91, p92, p93, p94, p95, p96, p97, p98, p99, p100, p101, p102, ],[p6, ],[p103, p104, p105, p106, ],[p5, ],[p107, p108, p109, p110, p111, p112, p113, p114, p115, p116, p117, p118, p119, ],[p4, ],[p120, p121, p122, p123, ],[p3, ],[p128, p129, p130, p131, p132, p133, p134, p135, p136, p137, p138, p139, p140, p141, p142, p144, p145, p146, p147, p148, p149, p150, p151, ],[p152, p153, p154, p155, p156, p157, p158, p159, p160, p161, p162, p163, p164, p165, p166, ],[p127, ],[p168, p169, p170, p171, p172, p173, p174, p175, p176, p177, p178, p179, p180, p181, p182, p184, ],[p126, ],[p185, p186, p187, p188, p189, p190, p191, p192, p193, p194, p195, p196, p197, p198, p199, p201, ],[p125, ],[p202, p203, p204, p205, ],[p124, ],[p0, p1, p2, ],

May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.CompositeBuilder$Partition getIndex
INFO: Could not find partition element corresponding to p183 in partition [p12, p13, p14, p15, p16, p17, p18, p19, p20, p21, p22, ],[p23, p24, p25, p26, p27, p28, p29, p30, p31, p32, p33, ],[p11, ],[p34, p35, p36, p37, p38, p39, p40, p41, p42, p43, p44, p45, p46, p47, p48, p50, ],[p10, ],[p51, p52, p53, p54, p55, p56, p57, p58, p59, p60, p61, ],[p9, ],[p62, p63, p64, p65, p66, p67, p68, p69, p70, p71, p72, ],[p8, ],[p73, p74, p75, p76, p77, p78, p79, p80, p81, p82, p83, p84, p85, p86, p87, p89, ],[p7, ],[p90, p91, p92, p93, p94, p95, p96, p97, p98, p99, p100, p101, p102, ],[p6, ],[p103, p104, p105, p106, ],[p5, ],[p107, p108, p109, p110, p111, p112, p113, p114, p115, p116, p117, p118, p119, ],[p4, ],[p120, p121, p122, p123, ],[p3, ],[p128, p129, p130, p131, p132, p133, p134, p135, p136, p137, p138, p139, p140, p141, p142, p144, p145, p146, p147, p148, p149, p150, p151, ],[p152, p153, p154, p155, p156, p157, p158, p159, p160, p161, p162, p163, p164, p165, p166, ],[p127, ],[p168, p169, p170, p171, p172, p173, p174, p175, p176, p177, p178, p179, p180, p181, p182, p184, ],[p126, ],[p185, p186, p187, p188, p189, p190, p191, p192, p193, p194, p195, p196, p197, p198, p199, p201, ],[p125, ],[p202, p203, p204, p205, ],[p124, ],[p0, p1, p2, ],

May 28, 2016 9:01:15 PM fr.lip6.move.gal.instantiate.CompositeBuilder$Partition getIndex
INFO: Could not find partition element corresponding to p200 in partition [p12, p13, p14, p15, p16, p17, p18, p19, p20, p21, p22, ],[p23, p24, p25, p26, p27, p28, p29, p30, p31, p32, p33, ],[p11, ],[p34, p35, p36, p37, p38, p39, p40, p41, p42, p43, p44, p45, p46, p47, p48, p50, ],[p10, ],[p51, p52, p53, p54, p55, p56, p57, p58, p59, p60, p61, ],[p9, ],[p62, p63, p64, p65, p66, p67, p68, p69, p70, p71, p72, ],[p8, ],[p73, p74, p75, p76, p77, p78, p79, p80, p81, p82, p83, p84, p85, p86, p87, p89, ],[p7, ],[p90, p91, p92, p93, p94, p95, p96, p97, p98, p99, p100, p101, p102, ],[p6, ],[p103, p104, p105, p106, ],[p5, ],[p107, p108, p109, p110, p111, p112, p113, p114, p115, p116, p117, p118, p119, ],[p4, ],[p120, p121, p122, p123, ],[p3, ],[p128, p129, p130, p131, p132, p133, p134, p135, p136, p137, p138, p139, p140, p141, p142, p144, p145, p146, p147, p148, p149, p150, p151, ],[p152, p153, p154, p155, p156, p157, p158, p159, p160, p161, p162, p163, p164, p165, p166, ],[p127, ],[p168, p169, p170, p171, p172, p173, p174, p175, p176, p177, p178, p179, p180, p181, p182, p184, ],[p126, ],[p185, p186, p187, p188, p189, p190, p191, p192, p193, p194, p195, p196, p197, p198, p199, p201, ],[p125, ],[p202, p203, p204, p205, ],[p124, ],[p0, p1, p2, ],

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="AutoFlight-PT-02b"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/home/hulinhub/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/AutoFlight-PT-02b.tgz
mv AutoFlight-PT-02b execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool itstools"
echo " Input is AutoFlight-PT-02b, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r205su-blw3-146445815400197"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;