Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..................
=====================================================================
Generated by BenchKit 2-2979
Executing tool itstools
Input is S_Angiogenesis-PT-05, examination is LTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r169kn-ebro-146433127400024
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-0
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-1
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-10
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-11
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-12
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-13
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-14
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-15
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-2
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-3
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-4
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-5
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-6
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-7
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-8
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-9

=== Now, execution of the tool begins

BK_START 1464332283452


its-ltl command run as :

/home/mcc/BenchKit/eclipse/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201605191313/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock
Read 16 LTL properties
Checking formula 0 : !((G(X((G(("KdStarGStar>=1")&&("Pip3>=1")))U(F("KdStarGStarPg>=1"))))))
Formula 0 simplified : !GX(G("KdStarGStar>=1" & "Pip3>=1") U F"KdStarGStarPg>=1")
3 unique states visited
3 strongly connected components in search stack
4 transitions explored
3 items max in DFS search stack
849 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,8.54574,141368,1,0,80,537234,158,57,1639,502687,156
an accepting run exists (use option '-e' to print it)
Formula 0 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-0 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 1 : !((F(G((G("KdStarGStarPgStarP3P2>=1"))U(F(("KdStarGStarP3>=1")&&("P3k>=1")))))))
Formula 1 simplified : !FG(G"KdStarGStarPgStarP3P2>=1" U F("KdStarGStarP3>=1" & "P3k>=1"))
3 unique states visited
3 strongly connected components in search stack
4 transitions explored
3 items max in DFS search stack
37 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,8.91967,148088,1,0,82,565930,172,59,1644,533623,167
an accepting run exists (use option '-e' to print it)
Formula 1 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-1 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 2 : !((("KdStarGStarP3kStarP3>=1")&&("Pip2>=1")))
Formula 2 simplified : !("KdStarGStarP3kStarP3>=1" & "Pip2>=1")
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
85 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,9.7717,161800,1,0,83,631011,182,60,1649,609132,176
an accepting run exists (use option '-e' to print it)
Formula 2 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-2 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 3 : !((("KdStarG>=1")U(F(X(X(("KdStarGStarPgStarP3>=1")&&("Pip2>=1")))))))
Formula 3 simplified : !("KdStarG>=1" U FXX("KdStarGStarPgStarP3>=1" & "Pip2>=1"))
4 unique states visited
4 strongly connected components in search stack
4 transitions explored
4 items max in DFS search stack
6574 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,75.5099,1004256,1,0,203,4.72274e+06,194,202,1653,5.99768e+06,489
an accepting run exists (use option '-e' to print it)
Formula 3 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-3 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 4 : !((G(G(("KdStarGStarP3>=1")U(X(("GStarP3>=1")&&("P3k>=1")))))))
Formula 4 simplified : !G("KdStarGStarP3>=1" U X("GStarP3>=1" & "P3k>=1"))
4 unique states visited
4 strongly connected components in search stack
5 transitions explored
4 items max in DFS search stack
33 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,75.8379,1010036,1,0,205,4.74649e+06,201,204,1657,6.01881e+06,498
an accepting run exists (use option '-e' to print it)
Formula 4 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-4 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 5 : !((G(F(G(F(F("KdStarGStarP3>=1")))))))
Formula 5 simplified : !GFGF"KdStarGStarP3>=1"
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
1 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,75.8419,1010164,1,0,205,4.74649e+06,207,204,1657,6.01881e+06,504
an accepting run exists (use option '-e' to print it)
Formula 5 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-5 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 6 : !(((("GP3>=1")&&("KdStar>=1"))U(G(G("KdStarG>=1")))))
Formula 6 simplified : !(("GP3>=1" & "KdStar>=1") U G"KdStarG>=1")
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,75.8442,1010536,1,0,205,4.74649e+06,241,204,1684,6.01881e+06,513
an accepting run exists (use option '-e' to print it)
Formula 6 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-6 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 7 : !((G((F(G("KdStarGStarPgP3>=1")))U(("Pip2>=1")&&("Pten>=1")))))
Formula 7 simplified : !G(FG"KdStarGStarPgP3>=1" U ("Pip2>=1" & "Pten>=1"))
2 unique states visited
2 strongly connected components in search stack
3 transitions explored
2 items max in DFS search stack
259 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,78.4369,1047512,1,0,219,4.94161e+06,254,216,1689,6.2658e+06,547
an accepting run exists (use option '-e' to print it)
Formula 7 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-7 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 8 : !((G((F(X("PtP3>=1")))U(F(G("PtP3>=1"))))))
Formula 8 simplified : !G(FX"PtP3>=1" U FG"PtP3>=1")
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
13025 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,208.689,2221872,1,0,448,1.0661e+07,20,378,775,1.40499e+07,203
an accepting run exists (use option '-e' to print it)
Formula 8 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-8 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 9 : !(((G(("KdStarGStarP3kP3>=1")U(("GP3>=1")&&("KdStar>=1"))))U(X(F(X("KdStarGP3>=1"))))))
Formula 9 simplified : !(G("KdStarGStarP3kP3>=1" U ("GP3>=1" & "KdStar>=1")) U XFX"KdStarGP3>=1")
4 unique states visited
4 strongly connected components in search stack
4 transitions explored
4 items max in DFS search stack
3083 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,239.546,2222568,1,0,448,1.0661e+07,30,378,919,1.40499e+07,523
an accepting run exists (use option '-e' to print it)
Formula 9 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-9 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 10 : !((X("KdStarGStarPgStarP2>=1")))
Formula 10 simplified : !X"KdStarGStarPgStarP2>=1"
4 unique states visited
4 strongly connected components in search stack
4 transitions explored
4 items max in DFS search stack
168 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,241.228,2222568,1,0,448,1.0661e+07,40,378,958,1.40499e+07,536
an accepting run exists (use option '-e' to print it)
Formula 10 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-10 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 11 : !((F(F(G(("KdStarGStarPg>=1")U("KdStarGStarP3kP3>=1"))))))
Formula 11 simplified : !FG("KdStarGStarPg>=1" U "KdStarGStarP3kP3>=1")
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
136 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,242.591,2222580,1,0,448,1.0661e+07,56,378,967,1.40499e+07,560
an accepting run exists (use option '-e' to print it)
Formula 11 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-11 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 12 : !((X(("KdStarGStar>=1")&&("P3k>=1"))))
Formula 12 simplified : !X("KdStarGStar>=1" & "P3k>=1")
4 unique states visited
4 strongly connected components in search stack
4 transitions explored
4 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,242.607,2222580,1,0,448,1.0661e+07,64,378,972,1.40499e+07,562
an accepting run exists (use option '-e' to print it)
Formula 12 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-12 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 13 : !(("KdStarGStarP3kP3>=1"))
Formula 13 simplified : !"KdStarGStarP3kP3>=1"
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,242.608,2222580,1,0,448,1.0661e+07,65,378,972,1.40499e+07,564
an accepting run exists (use option '-e' to print it)
Formula 13 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-13 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 14 : !((G(("KdStarGStarP3>=1")&&("P3k>=1"))))
Formula 14 simplified : !G("KdStarGStarP3>=1" & "P3k>=1")
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
1 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,242.609,2222580,1,0,448,1.0661e+07,76,378,978,1.40499e+07,569
an accepting run exists (use option '-e' to print it)
Formula 14 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-14 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 15 : !((G(X(X(G(("KdStar>=1")&&("Pg>=1")))))))
Formula 15 simplified : !GXXG("KdStar>=1" & "Pg>=1")
5 unique states visited
5 strongly connected components in search stack
5 transitions explored
5 items max in DFS search stack
1435 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,256.954,2222584,1,0,448,1.0661e+07,89,378,985,1.40499e+07,866
an accepting run exists (use option '-e' to print it)
Formula 15 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-15 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL

BK_STOP 1464332560733

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLFireability = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLFireability -its
+ ulimit -s 65536
+ java -Dosgi.requiredJavaVersion=1.6 -XX:MaxPermSize=512m -Xss8m -Xms40m -Xmx8192m -Declipse.pde.launch=true -Dfile.encoding=UTF-8 -classpath /home/mcc/BenchKit//eclipse/plugins/org.eclipse.equinox.launcher_1.3.100.v20150511-1540.jar org.eclipse.equinox.launcher.Main -application fr.lip6.move.gal.application.pnmcc -data /home/mcc/BenchKit//workspace -os linux -ws gtk -arch x86_64 -nl en_US -consoleLog -pnfolder /home/mcc/execution -examination LTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512m; support was removed in 8.0
May 27, 2016 6:58:08 AM fr.lip6.move.gal.application.Application transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 27, 2016 6:58:08 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 70 ms
May 27, 2016 6:58:08 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 39 places.
May 27, 2016 6:58:08 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 64 transitions.
May 27, 2016 6:58:08 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 92 ms
May 27, 2016 6:58:08 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLFireability.gal : 36 ms
May 27, 2016 6:58:08 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 6 ms

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="S_Angiogenesis-PT-05"
export BK_EXAMINATION="LTLFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/users/gast00/fkordon/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/S_Angiogenesis-PT-05.tgz
mv S_Angiogenesis-PT-05 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool itstools"
echo " Input is S_Angiogenesis-PT-05, examination is LTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r169kn-ebro-146433127400024"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;