Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
................
=====================================================================
Generated by BenchKit 2-2979
Executing tool marcie
Input is S_Diffusion2D-PT-D30N050, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r149kn-smll-146416258400223
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-0
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-1
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-10
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-11
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-12
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-13
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-14
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-15
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-2
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-3
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-4
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-5
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-6
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-7
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-8
FORMULA_NAME Diffusion2D-PT-D30N050-ReachabilityCardinality-9

=== Now, execution of the tool begins

BK_START 1464234587843


Marcie rev. 8535M (built: crohr on 2016-04-27)
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: marcie --net-file=model.pnml --mcc-file=ReachabilityCardinality.xml --mcc-mode --memory=6 --suppress

parse successfull
net created successfully

Net: Diffusion2D_PT_D30N050
(NrP: 900 NrTr: 6844 NrArc: 13688)

net check time: 0m 0.004sec

parse formulas
formulas created successfully
place and transition orderings generation:0m 0.433sec

init dd package: 0m 3.663sec


RS generation: 13m47.454sec


-> reachability set: #nodes 45850 (4.6e+04) #states 645,096,814,000,679,282,952,391,947,179,544,255,721,676,295,850,540,319,999,615,425,141,266,616,539,859,296,666 (83)



starting MCC model checker
--------------------------


before gc: list nodes free: 3259

after gc: idd nodes used:76323, unused:63923677; list nodes free:683566513
checking: AG [~ [2<=cAMP__19_27_]]
normalized: ~ [E [true U 2<=cAMP__19_27_]]

abstracting: (2<=cAMP__19_27_) states: 1,756,776,169,342,883,963,169,492,504,423,803,233,381,470,751,839,404,329,673,093,364,541,070,558,974,642,725 (81)

FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-7 CANNOT_COMPUTE

MC time: 21m19.389sec

checking: EF [3<=cAMP__9_14_]
normalized: E [true U 3<=cAMP__9_14_]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-11 CANNOT_COMPUTE

MC time: 0m 0.004sec

checking: EF [2<=cAMP__19_10_]
normalized: E [true U 2<=cAMP__19_10_]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-13 CANNOT_COMPUTE

MC time: 0m 0.003sec

checking: EF [3<=cAMP__21_26_]
normalized: E [true U 3<=cAMP__21_26_]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-15 CANNOT_COMPUTE

MC time: 0m 0.002sec

checking: EF [~ [cAMP__10_1_<=cAMP__2_20_]]
normalized: E [true U ~ [cAMP__10_1_<=cAMP__2_20_]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-0 CANNOT_COMPUTE

MC time: 0m 0.001sec

checking: AG [cAMP__10_14_<=cAMP__1_5_]
normalized: ~ [E [true U ~ [cAMP__10_14_<=cAMP__1_5_]]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-3 CANNOT_COMPUTE

MC time: 0m 0.001sec

checking: EF [[3<=cAMP__21_28_ & 3<=cAMP__26_10_]]
normalized: E [true U [3<=cAMP__21_28_ & 3<=cAMP__26_10_]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-4 CANNOT_COMPUTE

MC time: 0m 0.002sec

checking: EF [[3<=cAMP__29_19_ & cAMP__12_21_<=cAMP__17_20_]]
normalized: E [true U [3<=cAMP__29_19_ & cAMP__12_21_<=cAMP__17_20_]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-5 CANNOT_COMPUTE

MC time: 0m 0.001sec

checking: EF [~ [[[cAMP__6_25_<=cAMP__20_13_ & 3<=cAMP__21_23_] | ~ [2<=cAMP__5_14_]]]]
normalized: E [true U ~ [[[cAMP__6_25_<=cAMP__20_13_ & 3<=cAMP__21_23_] | ~ [2<=cAMP__5_14_]]]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-6 CANNOT_COMPUTE

MC time: 0m 0.001sec

checking: AG [[cAMP__4_13_<=cAMP__27_20_ | ~ [~ [cAMP__6_1_<=cAMP__6_12_]]]]
normalized: ~ [E [true U ~ [[cAMP__4_13_<=cAMP__27_20_ | cAMP__6_1_<=cAMP__6_12_]]]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-8 CANNOT_COMPUTE

MC time: 0m 0.001sec

checking: AG [[~ [~ [cAMP__1_9_<=cAMP__24_25_]] | ~ [~ [cAMP__23_20_<=cAMP__4_16_]]]]
normalized: ~ [E [true U ~ [[cAMP__1_9_<=cAMP__24_25_ | cAMP__23_20_<=cAMP__4_16_]]]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-10 CANNOT_COMPUTE

MC time: 0m 0.001sec

checking: AG [~ [~ [[cAMP__7_26_<=cAMP__18_4_ | cAMP__12_24_<=cAMP__4_3_]]]]
normalized: ~ [E [true U ~ [[cAMP__7_26_<=cAMP__18_4_ | cAMP__12_24_<=cAMP__4_3_]]]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-12 CANNOT_COMPUTE

MC time: 0m 0.001sec

checking: EF [[~ [[cAMP__20_20_<=cAMP__21_23_ | 1<=cAMP__17_27_]] & cAMP__20_20_<=cAMP__25_2_]]
normalized: E [true U [cAMP__20_20_<=cAMP__25_2_ & ~ [[cAMP__20_20_<=cAMP__21_23_ | 1<=cAMP__17_27_]]]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-2 CANNOT_COMPUTE

MC time: 0m 0.001sec

checking: EF [~ [[cAMP__7_19_<=cAMP__26_11_ | [cAMP__16_1_<=cAMP__24_23_ | 3<=cAMP__21_10_]]]]
normalized: E [true U ~ [[cAMP__7_19_<=cAMP__26_11_ | [cAMP__16_1_<=cAMP__24_23_ | 3<=cAMP__21_10_]]]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-9 CANNOT_COMPUTE

MC time: 0m 0.001sec

checking: AG [[[~ [3<=cAMP__22_2_] | [cAMP__9_28_<=cAMP__18_10_ & 3<=cAMP__1_17_]] & ~ [[2<=cAMP__24_4_ | 2<=cAMP__28_23_]]]]
normalized: ~ [E [true U ~ [[~ [[2<=cAMP__24_4_ | 2<=cAMP__28_23_]] & [~ [3<=cAMP__22_2_] | [cAMP__9_28_<=cAMP__18_10_ & 3<=cAMP__1_17_]]]]]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-14 CANNOT_COMPUTE

MC time: 0m 0.001sec

checking: EF [[[[cAMP__30_28_<=cAMP__7_6_ | cAMP__5_15_<=cAMP__2_20_] | [cAMP__12_24_<=cAMP__14_30_ | cAMP__5_23_<=cAMP__18_13_]] & 3<=cAMP__13_4_]]
normalized: E [true U [3<=cAMP__13_4_ & [[cAMP__12_24_<=cAMP__14_30_ | cAMP__5_23_<=cAMP__18_13_] | [cAMP__30_28_<=cAMP__7_6_ | cAMP__5_15_<=cAMP__2_20_]]]]


FORMULA Diffusion2D-PT-D30N050-ReachabilityCardinality-1 CANNOT_COMPUTE

MC time: 0m 0.001sec


Total processing time: 49m58.120sec


BK_STOP 1464237586363

--------------------
content from stderr:

check for maximal unmarked siphon
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m 0.153sec

900 900 900 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27300 27350 27450 27500 27550 27600 27650 27700 27800 27850 27900 28000 28050 28100 28150 28250 28300 28350 28400 28500 28650 28850 29050 29250 29350 29450 29650 29800 30000 30150 30250 30350 30500 30700 30850 31000 31150 31200 31300 31500 31650 31800 31950 32100 32200 32200 32250 32400 32500 32650 32800 32950 33100 33300 33450 33600 33750 33900 34050 34200 34350 34550 34700 34850 35000 35200 35400 35550 35750 35900 36100 36300 36450 36650 36850 37050 37250 37450 37650 37850 38050 38300 38550 38750 39000 39250 39500 39750 40050 40300 40650 40950 41300 41750 42250 42650 42650 42700 42700 42750 42750 42750 42800 42850 42850 43000 43000 43150 43300 43300 43450 43600 43750 43900 44050 44200 44350 44500 44750 44950 45250 45400 45650
iterations count:269356 (39), effective:899 (0)

initing FirstDep: 0m 0.150sec

44052 44052 44052 44052 44052 118358 116534 115478std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

/home/crohr/workspace/dssz_util/src/dssz/idd/idd.cc:810: DD Exception: No free nodes

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

std::bad_alloc

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="S_Diffusion2D-PT-D30N050"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="marcie"
export BK_RESULT_DIR="/root/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/S_Diffusion2D-PT-D30N050.tgz
mv S_Diffusion2D-PT-D30N050 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool marcie"
echo " Input is S_Diffusion2D-PT-D30N050, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r149kn-smll-146416258400223"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;