Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.............
=====================================================================
Generated by BenchKit 2-2979
Executing tool itstools
Input is S_Diffusion2D-PT-D05N100, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r145kn-smll-146416245800077
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-0
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-1
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-10
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-11
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-12
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-13
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-14
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-15
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-2
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-3
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-4
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-5
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-6
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-7
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-8
FORMULA_NAME Diffusion2D-PT-D05N100-LTLCardinality-9

=== Now, execution of the tool begins

BK_START 1464169896888


its-ltl command run as :

/home/mcc/BenchKit/eclipse/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201605191313/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock
Read 16 LTL properties
Checking formula 0 : !(("cAMP__4_2_<=cAMP__4_5_"))
Formula 0 simplified : !"cAMP__4_2_<=cAMP__4_5_"
1 unique states visited
0 strongly connected components in search stack
0 transitions explored
1 items max in DFS search stack
892 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,8.95996,109212,1,0,5,536756,14,0,3338,516866,4
no accepting run found
Formula 0 is TRUE no accepting run found.
FORMULA Diffusion2D-PT-D05N100-LTLCardinality-0 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 1 : !(("2<=cAMP__5_5_"))
Formula 1 simplified : !"2<=cAMP__5_5_"
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
239 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,11.3475,127032,1,0,6,563801,23,0,3410,531536,19
an accepting run exists (use option '-e' to print it)
Formula 1 is FALSE accepting run found.
FORMULA Diffusion2D-PT-D05N100-LTLCardinality-1 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 2 : !((X(X(G("1<=cAMP__3_3_")))))
Formula 2 simplified : !XXG"1<=cAMP__3_3_"
5 unique states visited
5 strongly connected components in search stack
5 transitions explored
5 items max in DFS search stack
44445 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,455.795,2222188,1,0,185,1.46834e+07,19,138,3115,1.58898e+07,314
an accepting run exists (use option '-e' to print it)
Formula 2 is FALSE accepting run found.
FORMULA Diffusion2D-PT-D05N100-LTLCardinality-2 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 3 : !(((X(X("3<=cAMP__2_5_")))U(F(F("cAMP__3_3_<=cAMP__5_3_")))))
Formula 3 simplified : !(XX"3<=cAMP__2_5_" U F"cAMP__3_3_<=cAMP__5_3_")
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
115240 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1608.2,3028276,1,0,199,1.61381e+07,14,138,3104,1.93516e+07,257
an accepting run exists (use option '-e' to print it)
Formula 3 is FALSE accepting run found.
FORMULA Diffusion2D-PT-D05N100-LTLCardinality-3 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 4 : !((X(X("cAMP__1_1_<=cAMP__2_1_"))))
Formula 4 simplified : !XX"cAMP__1_1_<=cAMP__2_1_"
5 unique states visited
5 strongly connected components in search stack
5 transitions explored
5 items max in DFS search stack
580 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1614,3028276,1,0,199,1.61381e+07,25,138,3295,1.93516e+07,279
an accepting run exists (use option '-e' to print it)
Formula 4 is FALSE accepting run found.
FORMULA Diffusion2D-PT-D05N100-LTLCardinality-4 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 5 : !(("2<=cAMP__2_5_"))
Formula 5 simplified : !"2<=cAMP__2_5_"
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
1 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1614.01,3028276,1,0,199,1.61381e+07,28,138,3297,1.93516e+07,283
an accepting run exists (use option '-e' to print it)
Formula 5 is FALSE accepting run found.
FORMULA Diffusion2D-PT-D05N100-LTLCardinality-5 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 6 : !((G(G("3<=cAMP__3_5_"))))
Formula 6 simplified : !G"3<=cAMP__3_5_"
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1614.01,3028300,1,0,199,1.61381e+07,34,138,3299,1.93516e+07,288
an accepting run exists (use option '-e' to print it)
Formula 6 is FALSE accepting run found.
FORMULA Diffusion2D-PT-D05N100-LTLCardinality-6 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 7 : !((F(F(X(F("1<=cAMP__4_1_"))))))
Formula 7 simplified : !FXF"1<=cAMP__4_1_"
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
45203 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,2066.04,3354156,1,0,265,2.10214e+07,14,138,2966,2.29416e+07,615
an accepting run exists (use option '-e' to print it)
Formula 7 is FALSE accepting run found.
FORMULA Diffusion2D-PT-D05N100-LTLCardinality-7 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 8 : !(("3<=cAMP__2_5_"))
Formula 8 simplified : !"3<=cAMP__2_5_"
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
772 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,2073.76,3358228,1,0,265,2.15344e+07,25,138,3188,2.3438e+07,631
an accepting run exists (use option '-e' to print it)
Formula 8 is FALSE accepting run found.
FORMULA Diffusion2D-PT-D05N100-LTLCardinality-8 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 9 : !(("1<=cAMP__3_2_"))
Formula 9 simplified : !"1<=cAMP__3_2_"
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
0 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,2073.76,3358228,1,0,265,2.15344e+07,28,138,3190,2.3438e+07,633
an accepting run exists (use option '-e' to print it)
Formula 9 is FALSE accepting run found.
FORMULA Diffusion2D-PT-D05N100-LTLCardinality-9 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 10 : !((X(F(X(F("cAMP__1_1_<=cAMP__5_3_"))))))
Formula 10 simplified : !XFXF"cAMP__1_1_<=cAMP__5_3_"
COULD_NOT_COMPUTE

BK_STOP 1464173411635

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLCardinality -its
+ ulimit -s 65536
+ java -Dosgi.requiredJavaVersion=1.6 -XX:MaxPermSize=512m -Xss8m -Xms40m -Xmx8192m -Declipse.pde.launch=true -Dfile.encoding=UTF-8 -classpath /home/mcc/BenchKit//eclipse/plugins/org.eclipse.equinox.launcher_1.3.100.v20150511-1540.jar org.eclipse.equinox.launcher.Main -application fr.lip6.move.gal.application.pnmcc -data /home/mcc/BenchKit//workspace -os linux -ws gtk -arch x86_64 -nl en_US -consoleLog -pnfolder /home/mcc/execution -examination LTLCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512m; support was removed in 8.0
May 25, 2016 9:51:40 AM fr.lip6.move.gal.application.Application transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 25, 2016 9:51:40 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 48 ms
May 25, 2016 9:51:40 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 25 places.
May 25, 2016 9:51:40 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 144 transitions.
May 25, 2016 9:51:41 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 98 ms
May 25, 2016 9:51:41 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLCardinality.gal : 17 ms
May 25, 2016 9:51:41 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 0 ms
May 25, 2016 10:50:08 AM fr.lip6.move.gal.itstools.ProcessController$1 run
WARNING: null
java.io.IOException: Pipe broken
at java.io.PipedInputStream.read(PipedInputStream.java:321)
at java.io.PipedInputStream.read(PipedInputStream.java:377)
at sun.nio.cs.StreamDecoder.readBytes(StreamDecoder.java:284)
at sun.nio.cs.StreamDecoder.implRead(StreamDecoder.java:326)
at sun.nio.cs.StreamDecoder.read(StreamDecoder.java:178)
at java.io.InputStreamReader.read(InputStreamReader.java:184)
at java.io.BufferedReader.fill(BufferedReader.java:161)
at java.io.BufferedReader.readLine(BufferedReader.java:324)
at java.io.BufferedReader.readLine(BufferedReader.java:389)
at fr.lip6.move.gal.application.Application$ITSInterpreter.run(Application.java:460)
at java.lang.Thread.run(Thread.java:745)

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="S_Diffusion2D-PT-D05N100"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/root/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/S_Diffusion2D-PT-D05N100.tgz
mv S_Diffusion2D-PT-D05N100 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool itstools"
echo " Input is S_Diffusion2D-PT-D05N100, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r145kn-smll-146416245800077"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;