Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................
=====================================================================
Generated by BenchKit 2-2979
Executing tool itstools
Input is Philosophers-COL-000050, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r085kn-ebro-146369085100227
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Philosophers-COL-000050-UpperBounds-0
FORMULA_NAME Philosophers-COL-000050-UpperBounds-1
FORMULA_NAME Philosophers-COL-000050-UpperBounds-10
FORMULA_NAME Philosophers-COL-000050-UpperBounds-11
FORMULA_NAME Philosophers-COL-000050-UpperBounds-12
FORMULA_NAME Philosophers-COL-000050-UpperBounds-13
FORMULA_NAME Philosophers-COL-000050-UpperBounds-14
FORMULA_NAME Philosophers-COL-000050-UpperBounds-15
FORMULA_NAME Philosophers-COL-000050-UpperBounds-2
FORMULA_NAME Philosophers-COL-000050-UpperBounds-3
FORMULA_NAME Philosophers-COL-000050-UpperBounds-4
FORMULA_NAME Philosophers-COL-000050-UpperBounds-5
FORMULA_NAME Philosophers-COL-000050-UpperBounds-6
FORMULA_NAME Philosophers-COL-000050-UpperBounds-7
FORMULA_NAME Philosophers-COL-000050-UpperBounds-8
FORMULA_NAME Philosophers-COL-000050-UpperBounds-9

=== Now, execution of the tool begins

BK_START 1464046574630

!SESSION 2016-05-23 23:36:15.333 -----------------------------------------------
eclipse.buildId=4.5.2.M20160212-1500
java.version=1.8.0_77
java.vendor=Oracle Corporation
BootLoader constants: OS=linux, ARCH=x86_64, WS=gtk, NL=en_US
Framework arguments: -application fr.lip6.move.gal.application.pnmcc -pnfolder /home/mcc/execution -examination UpperBounds -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its
Command-line arguments: -application fr.lip6.move.gal.application.pnmcc -data /home/mcc/BenchKit//workspace -os linux -ws gtk -arch x86_64 -consoleLog -pnfolder /home/mcc/execution -examination UpperBounds -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its

!ENTRY org.eclipse.osgi 4 0 2016-05-23 23:36:24.422
!MESSAGE Application error
!STACK 1
java.lang.ArrayIndexOutOfBoundsException: -1
at org.eclipse.emf.common.util.BasicEList.get(BasicEList.java:348)
at fr.lip6.move.gal.instantiate.CompositeBuilder.galToCompositeWithPartition(CompositeBuilder.java:399)
at fr.lip6.move.gal.instantiate.CompositeBuilder.decomposeWithOrder(CompositeBuilder.java:112)
at fr.lip6.move.gal.application.Application.applyOrder(Application.java:745)
at fr.lip6.move.gal.application.Application.start(Application.java:307)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:380)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:235)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:669)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:608)
at org.eclipse.equinox.launcher.Main.run(Main.java:1515)
at org.eclipse.equinox.launcher.Main.main(Main.java:1488)
An error has occurred. See the log file
/home/mcc/BenchKit/workspace/.metadata/.log.

BK_STOP 1464046584952

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ UpperBounds = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution UpperBounds -its
+ ulimit -s 65536
+ java -Dosgi.requiredJavaVersion=1.6 -XX:MaxPermSize=512m -Xss8m -Xms40m -Xmx8192m -Declipse.pde.launch=true -Dfile.encoding=UTF-8 -classpath /home/mcc/BenchKit//eclipse/plugins/org.eclipse.equinox.launcher_1.3.100.v20150511-1540.jar org.eclipse.equinox.launcher.Main -application fr.lip6.move.gal.application.pnmcc -data /home/mcc/BenchKit//workspace -os linux -ws gtk -arch x86_64 -nl en_US -consoleLog -pnfolder /home/mcc/execution -examination UpperBounds -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512m; support was removed in 8.0
May 23, 2016 11:36:19 PM fr.lip6.move.gal.application.Application transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 23, 2016 11:36:19 PM fr.lip6.move.gal.pnml.togal.PnmlToGalTransformer transform
INFO: Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
May 23, 2016 11:36:23 PM fr.lip6.move.gal.pnml.togal.PnmlToGalTransformer transform
INFO: Load time of PNML (colored model parsed with PNMLFW) : 4184 ms
May 23, 2016 11:36:23 PM fr.lip6.move.gal.pnml.togal.HLGALTransformer handlePage
INFO: Transformed 5 places.
May 23, 2016 11:36:23 PM fr.lip6.move.gal.pnml.togal.HLGALTransformer handlePage
INFO: read order :VarOrder [vars=[think[0], think[1], think[2], think[3], think[4], think[5], think[6], think[7], think[8], think[9], think[10], think[11], think[12], think[13], think[14], think[15], think[16], think[17], think[18], think[19], think[20], think[21], think[22], think[23], think[24], think[25], think[26], think[27], think[28], think[29], think[30], think[31], think[32], think[33], think[34], think[35], think[36], think[37], think[38], think[39], think[40], think[41], think[42], think[43], think[44], think[45], think[46], think[47], think[48], think[49], fork[0], fork[1], fork[2], fork[3], fork[4], fork[5], fork[6], fork[7], fork[8], fork[9], fork[10], fork[11], fork[12], fork[13], fork[14], fork[15], fork[16], fork[17], fork[18], fork[19], fork[20], fork[21], fork[22], fork[23], fork[24], fork[25], fork[26], fork[27], fork[28], fork[29], fork[30], fork[31], fork[32], fork[33], fork[34], fork[35], fork[36], fork[37], fork[38], fork[39], fork[40], fork[41], fork[42], fork[43], fork[44], fork[45], fork[46], fork[47], fork[48], fork[49], catch1[0], catch1[1], catch1[2], catch1[3], catch1[4], catch1[5], catch1[6], catch1[7], catch1[8], catch1[9], catch1[10], catch1[11], catch1[12], catch1[13], catch1[14], catch1[15], catch1[16], catch1[17], catch1[18], catch1[19], catch1[20], catch1[21], catch1[22], catch1[23], catch1[24], catch1[25], catch1[26], catch1[27], catch1[28], catch1[29], catch1[30], catch1[31], catch1[32], catch1[33], catch1[34], catch1[35], catch1[36], catch1[37], catch1[38], catch1[39], catch1[40], catch1[41], catch1[42], catch1[43], catch1[44], catch1[45], catch1[46], catch1[47], catch1[48], catch1[49], catch2[0], catch2[1], catch2[2], catch2[3], catch2[4], catch2[5], catch2[6], catch2[7], catch2[8], catch2[9], catch2[10], catch2[11], catch2[12], catch2[13], catch2[14], catch2[15], catch2[16], catch2[17], catch2[18], catch2[19], catch2[20], catch2[21], catch2[22], catch2[23], catch2[24], catch2[25], catch2[26], catch2[27], catch2[28], catch2[29], catch2[30], catch2[31], catch2[32], catch2[33], catch2[34], catch2[35], catch2[36], catch2[37], catch2[38], catch2[39], catch2[40], catch2[41], catch2[42], catch2[43], catch2[44], catch2[45], catch2[46], catch2[47], catch2[48], catch2[49], eat[0], eat[1], eat[2], eat[3], eat[4], eat[5], eat[6], eat[7], eat[8], eat[9], eat[10], eat[11], eat[12], eat[13], eat[14], eat[15], eat[16], eat[17], eat[18], eat[19], eat[20], eat[21], eat[22], eat[23], eat[24], eat[25], eat[26], eat[27], eat[28], eat[29], eat[30], eat[31], eat[32], eat[33], eat[34], eat[35], eat[36], eat[37], eat[38], eat[39], eat[40], eat[41], eat[42], eat[43], eat[44], eat[45], eat[46], eat[47], eat[48], eat[49]]]
May 23, 2016 11:36:23 PM fr.lip6.move.gal.pnml.togal.HLGALTransformer handlePage
INFO: sort/places :Philo->think,fork,catch1,catch2,eat,

May 23, 2016 11:36:23 PM fr.lip6.move.gal.pnml.togal.HLGALTransformer handlePage
INFO: Transformed 5 transitions.
May 23, 2016 11:36:23 PM fr.lip6.move.gal.pnml.togal.PnmlToGalTransformer transform
INFO: Computed order based on color domains : CompositeGalOrder [children=[VarOrder [vars=[think[0], fork[0], catch1[0], catch2[0], eat[0]]], VarOrder [vars=[think[1], fork[1], catch1[1], catch2[1], eat[1]]], VarOrder [vars=[think[2], fork[2], catch1[2], catch2[2], eat[2]]], VarOrder [vars=[think[3], fork[3], catch1[3], catch2[3], eat[3]]], VarOrder [vars=[think[4], fork[4], catch1[4], catch2[4], eat[4]]], VarOrder [vars=[think[5], fork[5], catch1[5], catch2[5], eat[5]]], VarOrder [vars=[think[6], fork[6], catch1[6], catch2[6], eat[6]]], VarOrder [vars=[think[7], fork[7], catch1[7], catch2[7], eat[7]]], VarOrder [vars=[think[8], fork[8], catch1[8], catch2[8], eat[8]]], VarOrder [vars=[think[9], fork[9], catch1[9], catch2[9], eat[9]]], VarOrder [vars=[think[10], fork[10], catch1[10], catch2[10], eat[10]]], VarOrder [vars=[think[11], fork[11], catch1[11], catch2[11], eat[11]]], VarOrder [vars=[think[12], fork[12], catch1[12], catch2[12], eat[12]]], VarOrder [vars=[think[13], fork[13], catch1[13], catch2[13], eat[13]]], VarOrder [vars=[think[14], fork[14], catch1[14], catch2[14], eat[14]]], VarOrder [vars=[think[15], fork[15], catch1[15], catch2[15], eat[15]]], VarOrder [vars=[think[16], fork[16], catch1[16], catch2[16], eat[16]]], VarOrder [vars=[think[17], fork[17], catch1[17], catch2[17], eat[17]]], VarOrder [vars=[think[18], fork[18], catch1[18], catch2[18], eat[18]]], VarOrder [vars=[think[19], fork[19], catch1[19], catch2[19], eat[19]]], VarOrder [vars=[think[20], fork[20], catch1[20], catch2[20], eat[20]]], VarOrder [vars=[think[21], fork[21], catch1[21], catch2[21], eat[21]]], VarOrder [vars=[think[22], fork[22], catch1[22], catch2[22], eat[22]]], VarOrder [vars=[think[23], fork[23], catch1[23], catch2[23], eat[23]]], VarOrder [vars=[think[24], fork[24], catch1[24], catch2[24], eat[24]]], VarOrder [vars=[think[25], fork[25], catch1[25], catch2[25], eat[25]]], VarOrder [vars=[think[26], fork[26], catch1[26], catch2[26], eat[26]]], VarOrder [vars=[think[27], fork[27], catch1[27], catch2[27], eat[27]]], VarOrder [vars=[think[28], fork[28], catch1[28], catch2[28], eat[28]]], VarOrder [vars=[think[29], fork[29], catch1[29], catch2[29], eat[29]]], VarOrder [vars=[think[30], fork[30], catch1[30], catch2[30], eat[30]]], VarOrder [vars=[think[31], fork[31], catch1[31], catch2[31], eat[31]]], VarOrder [vars=[think[32], fork[32], catch1[32], catch2[32], eat[32]]], VarOrder [vars=[think[33], fork[33], catch1[33], catch2[33], eat[33]]], VarOrder [vars=[think[34], fork[34], catch1[34], catch2[34], eat[34]]], VarOrder [vars=[think[35], fork[35], catch1[35], catch2[35], eat[35]]], VarOrder [vars=[think[36], fork[36], catch1[36], catch2[36], eat[36]]], VarOrder [vars=[think[37], fork[37], catch1[37], catch2[37], eat[37]]], VarOrder [vars=[think[38], fork[38], catch1[38], catch2[38], eat[38]]], VarOrder [vars=[think[39], fork[39], catch1[39], catch2[39], eat[39]]], VarOrder [vars=[think[40], fork[40], catch1[40], catch2[40], eat[40]]], VarOrder [vars=[think[41], fork[41], catch1[41], catch2[41], eat[41]]], VarOrder [vars=[think[42], fork[42], catch1[42], catch2[42], eat[42]]], VarOrder [vars=[think[43], fork[43], catch1[43], catch2[43], eat[43]]], VarOrder [vars=[think[44], fork[44], catch1[44], catch2[44], eat[44]]], VarOrder [vars=[think[45], fork[45], catch1[45], catch2[45], eat[45]]], VarOrder [vars=[think[46], fork[46], catch1[46], catch2[46], eat[46]]], VarOrder [vars=[think[47], fork[47], catch1[47], catch2[47], eat[47]]], VarOrder [vars=[think[48], fork[48], catch1[48], catch2[48], eat[48]]], VarOrder [vars=[think[49], fork[49], catch1[49], catch2[49], eat[49]]]]]
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 213 ms
May 23, 2016 11:36:24 PM fr.lip6.move.gal.application.Application applyOrder
INFO: Applying decomposition
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 88 ms
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Partition obtained :[think[0], fork[0], catch1[0], catch2[0], eat[0], ],[think[1], fork[1], catch1[1], catch2[1], eat[1], ],[think[2], fork[2], catch1[2], catch2[2], eat[2], ],[think[3], fork[3], catch1[3], catch2[3], eat[3], ],[think[4], fork[4], catch1[4], catch2[4], eat[4], ],[think[5], fork[5], catch1[5], catch2[5], eat[5], ],[think[6], fork[6], catch1[6], catch2[6], eat[6], ],[think[7], fork[7], catch1[7], catch2[7], eat[7], ],[think[8], fork[8], catch1[8], catch2[8], eat[8], ],[think[9], fork[9], catch1[9], catch2[9], eat[9], ],[think[10], fork[10], catch1[10], catch2[10], eat[10], ],[think[11], fork[11], catch1[11], catch2[11], eat[11], ],[think[12], fork[12], catch1[12], catch2[12], eat[12], ],[think[13], fork[13], catch1[13], catch2[13], eat[13], ],[think[14], fork[14], catch1[14], catch2[14], eat[14], ],[think[15], fork[15], catch1[15], catch2[15], eat[15], ],[think[16], fork[16], catch1[16], catch2[16], eat[16], ],[think[17], fork[17], catch1[17], catch2[17], eat[17], ],[think[18], fork[18], catch1[18], catch2[18], eat[18], ],[think[19], fork[19], catch1[19], catch2[19], eat[19], ],[think[20], fork[20], catch1[20], catch2[20], eat[20], ],[think[21], fork[21], catch1[21], catch2[21], eat[21], ],[think[22], fork[22], catch1[22], catch2[22], eat[22], ],[think[23], fork[23], catch1[23], catch2[23], eat[23], ],[think[24], fork[24], catch1[24], catch2[24], eat[24], ],[think[25], fork[25], catch1[25], catch2[25], eat[25], ],[think[26], fork[26], catch1[26], catch2[26], eat[26], ],[think[27], fork[27], catch1[27], catch2[27], eat[27], ],[think[28], fork[28], catch1[28], catch2[28], eat[28], ],[think[29], fork[29], catch1[29], catch2[29], eat[29], ],[think[30], fork[30], catch1[30], catch2[30], eat[30], ],[think[31], fork[31], catch1[31], catch2[31], eat[31], ],[think[32], fork[32], catch1[32], catch2[32], eat[32], ],[think[33], fork[33], catch1[33], catch2[33], eat[33], ],[think[34], fork[34], catch1[34], catch2[34], eat[34], ],[think[35], fork[35], catch1[35], catch2[35], eat[35], ],[think[36], fork[36], catch1[36], catch2[36], eat[36], ],[think[37], fork[37], catch1[37], catch2[37], eat[37], ],[think[38], fork[38], catch1[38], catch2[38], eat[38], ],[think[39], fork[39], catch1[39], catch2[39], eat[39], ],[think[40], fork[40], catch1[40], catch2[40], eat[40], ],[think[41], fork[41], catch1[41], catch2[41], eat[41], ],[think[42], fork[42], catch1[42], catch2[42], eat[42], ],[think[43], fork[43], catch1[43], catch2[43], eat[43], ],[think[44], fork[44], catch1[44], catch2[44], eat[44], ],[think[45], fork[45], catch1[45], catch2[45], eat[45], ],[think[46], fork[46], catch1[46], catch2[46], eat[46], ],[think[47], fork[47], catch1[47], catch2[47], eat[47], ],[think[48], fork[48], catch1[48], catch2[48], eat[48], ],[think[49], fork[49], catch1[49], catch2[49], eat[49], ],

May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting array think to variables to allow decomposition.
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArrayAsVariables
WARNING: could not rewrite array : think
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting array fork to variables to allow decomposition.
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArrayAsVariables
WARNING: could not rewrite array : fork
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting array catch1 to variables to allow decomposition.
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArrayAsVariables
WARNING: could not rewrite array : catch1
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting array catch2 to variables to allow decomposition.
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArrayAsVariables
WARNING: could not rewrite array : catch2
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting array eat to variables to allow decomposition.
May 23, 2016 11:36:24 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArrayAsVariables
WARNING: could not rewrite array : eat

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Philosophers-COL-000050"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/users/gast00/fkordon/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Philosophers-COL-000050.tgz
mv Philosophers-COL-000050 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2979"
echo " Executing tool itstools"
echo " Input is Philosophers-COL-000050, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r085kn-ebro-146369085100227"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;