Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..............................................................
=====================================================================
Generated by BenchKit 2-2265
Executing tool itstools
Input is S_Angiogenesis-PT-01, examination is ReachabilityCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r117st-ebro-143297544200022
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-0
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-1
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-10
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-11
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-12
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-13
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-14
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-15
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-2
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-3
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-4
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-5
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-6
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-7
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-8
FORMULA_NAME Angiogenesis-PT-01-ReachabilityCardinality-9

=== Now, execution of the tool begins

BK_START 1433136860083

FORMULA Angiogenesis-PT-01-ReachabilityCardinality-12 FALSE TECHNIQUES TOPOLOGICAL
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-7 FALSE TECHNIQUES TOPOLOGICAL
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-6 FALSE TECHNIQUES TOPOLOGICAL
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-5 TRUE TECHNIQUES TOPOLOGICAL
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-4 FALSE TECHNIQUES TOPOLOGICAL
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-1 TRUE TECHNIQUES TOPOLOGICAL
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-0 FALSE TECHNIQUES TOPOLOGICAL
work folder: /home/mcc/execution
Reachability property Angiogenesis-PT-01-ReachabilityCardinality-2 is true.
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-2 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
Invariant property Angiogenesis-PT-01-ReachabilityCardinality-3 is true.
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-3 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
sat
Reachability property Angiogenesis-PT-01-ReachabilityCardinality-8 is true.
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-2 TRUE TECHNIQUES SAT_SMT COLLATERAL_PROCESSING
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-8 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
Reachability property Angiogenesis-PT-01-ReachabilityCardinality-9 is true.
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-9 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
Invariant property Angiogenesis-PT-01-ReachabilityCardinality-10 does not hold.
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-10 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
Reachability property Angiogenesis-PT-01-ReachabilityCardinality-11 is true.
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-11 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
Reachability property Angiogenesis-PT-01-ReachabilityCardinality-13 is true.
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-13 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
Invariant property Angiogenesis-PT-01-ReachabilityCardinality-14 is true.
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-14 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
Reachability property Angiogenesis-PT-01-ReachabilityCardinality-15 is true.
FORMULA Angiogenesis-PT-01-ReachabilityCardinality-15 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING

BK_STOP 1433136865197

--------------------
content from stderr:

Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512m; support was removed in 8.0
Jun 01, 2015 5:34:23 AM fr.lip6.move.gal.application.Application transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 01, 2015 5:34:23 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 52 ms
Jun 01, 2015 5:34:23 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 39 places.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 64 transitions.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityCardinality-0 is trivially false : it is not verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property Angiogenesis-PT-01-ReachabilityCardinality-1 is trivially true : it is verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityCardinality-4 is trivially false : it is not verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property Angiogenesis-PT-01-ReachabilityCardinality-5 is trivially true : it is verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityCardinality-6 is trivially false : it is not verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityCardinality-7 is trivially false : it is not verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityCardinality-12 is trivially false : it is not verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityCardinality-0 is trivially false : it is not verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property Angiogenesis-PT-01-ReachabilityCardinality-1 is trivially true : it is verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityCardinality-4 is trivially false : it is not verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Reachable property Angiogenesis-PT-01-ReachabilityCardinality-5 is trivially true : it is verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityCardinality-6 is trivially false : it is not verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityCardinality-7 is trivially false : it is not verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.PropertySimplifier rewriteWithInitialState
INFO: Invariant property Angiogenesis-PT-01-ReachabilityCardinality-12 is trivially false : it is not verified in initial state.
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 250 ms
Jun 01, 2015 5:34:24 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityCardinality.gal : 45 ms
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 67 ms
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 91 ms
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.cegar.support.SupportManager computeSupport
INFO: For property Angiogenesis-PT-01-ReachabilityCardinality-2:[reachable] : (!(GP3>=2)) found Support [GP3]
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.cegar.support.SupportManager computeSupport
INFO: Computing abstraction support, depth 0, found support 1
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.cegar.abstractor.BoundComputer compute
INFO: Bounding GAL to K = 1
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.cegar.abstractor.VariablesAbstractor abstractUsingSupport
INFO: Abstracting GAL, removed 38 / 39 variable(s)
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.cegar.checkers.CEGARChecker check
INFO: Checking abstraction for property Angiogenesis-PT-01-ReachabilityCardinality-2(refined 0 times)...
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.cegar.checkers.CEGARChecker check
INFO: Running its-reach -reachable on the abstraction...
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 6 ms
Jun 01, 2015 5:34:24 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/work/abstract.gal : 2 ms
Jun 01, 2015 5:34:24 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: No display to refresh.
Jun 01, 2015 5:34:24 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: No display to refresh.
Jun 01, 2015 5:34:24 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSTools
INFO: Time to serialize properties into /home/mcc/execution/ReachabilityCardinality.prop : 1 ms
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.cegar.checkers.ITSLauncher run
INFO: Run of its-reach took 452 ms
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.cegar.checkers.CEGARChecker check
INFO: Found trace: []
Jun 01, 2015 5:34:24 AM fr.lip6.move.gal.cegar.checkers.CEGARChecker check
INFO: Running its-reach -trace [] on the original GAL...
Jun 01, 2015 5:34:25 AM fr.lip6.move.gal.gal2smt.Gal2SMTFrontEnd checkProperties
INFO: SMT solution for property Angiogenesis-PT-01-ReachabilityCardinality-2(SAT) depth K=1 took 584 ms

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="S_Angiogenesis-PT-01"
export BK_EXAMINATION="ReachabilityCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/users/gast00/fkordon/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/S_Angiogenesis-PT-01.tgz
mv S_Angiogenesis-PT-01 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2265"
echo " Executing tool itstools"
echo " Input is S_Angiogenesis-PT-01, examination is ReachabilityCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r117st-ebro-143297544200022"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityCardinality" = "ReachabilityComputeBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;