Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
=====================================================================
Generated by BenchKit 2-2265
Executing tool marcie
Input is S_MAPK-PT-080, examination is CTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r162st-ebro-143319441300756
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPK-PT-080-CTLCardinality-0
FORMULA_NAME MAPK-PT-080-CTLCardinality-1
FORMULA_NAME MAPK-PT-080-CTLCardinality-10
FORMULA_NAME MAPK-PT-080-CTLCardinality-11
FORMULA_NAME MAPK-PT-080-CTLCardinality-12
FORMULA_NAME MAPK-PT-080-CTLCardinality-13
FORMULA_NAME MAPK-PT-080-CTLCardinality-14
FORMULA_NAME MAPK-PT-080-CTLCardinality-15
FORMULA_NAME MAPK-PT-080-CTLCardinality-2
FORMULA_NAME MAPK-PT-080-CTLCardinality-3
FORMULA_NAME MAPK-PT-080-CTLCardinality-4
FORMULA_NAME MAPK-PT-080-CTLCardinality-5
FORMULA_NAME MAPK-PT-080-CTLCardinality-6
FORMULA_NAME MAPK-PT-080-CTLCardinality-7
FORMULA_NAME MAPK-PT-080-CTLCardinality-8
FORMULA_NAME MAPK-PT-080-CTLCardinality-9

=== Now, execution of the tool begins

BK_START 1433382409858

Model: S_MAPK-PT-080
reachability algorithm:
Saturation-based algorithm
variable ordering algorithm:
Calculated like in [Noa99]
--memory=6 --suppress --rs-algorithm=3 --place-order=5

Marcie rev. 1429:1432M (built: crohr on 2014-10-22)
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: marcie --net-file=model.pnml --mcc-file=CTLCardinality.xml --memory=6 --suppress --rs-algorithm=3 --place-order=5

parse successfull
net created successfully

(NrP: 22 NrTr: 30 NrArc: 90)

net check time: 0m0sec

parse formulas successfull
formulas created successfully
place and transition orderings generation:0m0sec

init dd package: 0m5sec


RS generation: 0m8sec


-> reachability set: #nodes 179452 (1.8e+05) #states 5,634,903,909,420,423,840 (18)



starting MCC model checker
--------------------------

checking: E [[[2<=Raf_RasGTP | 2<=Phase3] | ~ [2<=MEKPP_Phase2]] U [[2<=ERK & 2<=RafP_Phase1] & ~ [3<=Phase3]]]
normalized: E [[~ [2<=MEKPP_Phase2] | [2<=Raf_RasGTP | 2<=Phase3]] U [[2<=ERK & 2<=RafP_Phase1] & ~ [3<=Phase3]]]

abstracting: (3<=Phase3) states: 5,634,491,244,583,574,949 (18)
abstracting: (2<=RafP_Phase1) states: 5,280,099,860,335,054,740 (18)
abstracting: (2<=ERK) states: 4,860,386,723,342,267,890 (18)
abstracting: (2<=Phase3) states: 5,634,779,271,134,439,276 (18)
abstracting: (2<=Raf_RasGTP) states: 4,942,057,974,308,194,790 (18)
abstracting: (2<=MEKPP_Phase2) states: 4,059,600,091,186,934,348 (18)
-> the formula is TRUE

FORMULA MAPK-PT-080-CTLCardinality-0 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 4m29sec

checking: AG [EX [3<=ERK]]
normalized: ~ [E [true U ~ [EX [3<=ERK]]]]

abstracting: (3<=ERK) states: 4,504,831,172,343,094,234 (18)
.-> the formula is FALSE

FORMULA MAPK-PT-080-CTLCardinality-1 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 4m16sec

checking: [E [2<=MEK U ~ [Raf_RasGTP<=Raf]] | [1<=Raf_RasGTP | A [3<=ERKPP_Phase3 U Raf<=MEKP_RafP]]]
normalized: [[1<=Raf_RasGTP | [~ [EG [~ [Raf<=MEKP_RafP]]] & ~ [E [~ [3<=ERKPP_Phase3] U [~ [3<=ERKPP_Phase3] & ~ [Raf<=MEKP_RafP]]]]]] | E [2<=MEK U ~ [Raf_RasGTP<=Raf]]]

abstracting: (Raf_RasGTP<=Raf) states: 4,164,512,366,088,744,392 (18)
abstracting: (2<=MEK) states: 4,059,600,091,186,934,348 (18)
abstracting: (Raf<=MEKP_RafP) states: 877,915,811,604,888,370 (17)
abstracting: (3<=ERKPP_Phase3) states: 4,504,831,172,343,094,234 (18)
abstracting: (3<=ERKPP_Phase3) states: 4,504,831,172,343,094,234 (18)

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m0sec

1596 4218 65714 131653 170313 173841 178529
iterations count:7295 (243), effective:1120 (37)

initing FirstDep: 0m0sec


iterations count:527 (17), effective:146 (4)

iterations count:411 (13), effective:128 (4)

iterations count:90 (3), effective:9 (0)

iterations count:59 (1), effective:3 (0)

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="S_MAPK-PT-080"
export BK_EXAMINATION="CTLCardinality"
export BK_TOOL="marcie"
export BK_RESULT_DIR="/users/gast00/fkordon/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/S_MAPK-PT-080.tgz
mv S_MAPK-PT-080 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2265"
echo " Executing tool marcie"
echo " Input is S_MAPK-PT-080, examination is CTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r162st-ebro-143319441300756"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLCardinality" = "ReachabilityComputeBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;