Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
................
=====================================================================
Generated by BenchKit 2-2265
Executing tool marcie
Input is S_Angiogenesis-PT-15, examination is ReachabilityFireabilitySimple
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r120st-ebro-143297419400065
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-0
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-1
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-10
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-11
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-12
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-13
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-14
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-15
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-2
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-3
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-4
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-5
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-6
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-7
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-8
FORMULA_NAME Angiogenesis-PT-15-ReachabilityFireabilitySimple-9

=== Now, execution of the tool begins

BK_START 1433155641873

Model: S_Angiogenesis-PT-15
reachability algorithm:
Saturation-based algorithm
variable ordering algorithm:
Calculated like in [Noa99]
--memory=6 --suppress --rs-algorithm=3 --place-order=5

Marcie rev. 1429:1432M (built: crohr on 2014-10-22)
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: marcie --net-file=model.pnml --mcc-file=ReachabilityFireabilitySimple.xml --memory=6 --suppress --rs-algorithm=3 --place-order=5

parse successfull
net created successfully

(NrP: 39 NrTr: 64 NrArc: 185)

net check time: 0m0sec

parse formulas successfull
formulas created successfully
place and transition orderings generation:0m0sec

init dd package: 0m5sec


RS generation: 2m1sec


-> reachability set: #nodes 187406 (1.9e+05) #states 1,115,538,966,669,107 (15)



starting MCC model checker
--------------------------

checking: EF [IS-FIREABLE [k6]]
normalized: E [true U IS-FIREABLE [k6]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-0 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 3m48sec

checking: EF [IS-FIREABLE [k45]]
normalized: E [true U IS-FIREABLE [k45]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-1 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 1m52sec

checking: EF [IS-FIREABLE [k27]]
normalized: E [true U IS-FIREABLE [k27]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-2 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 1m57sec

checking: EF [IS-FIREABLE [k24]]
normalized: E [true U IS-FIREABLE [k24]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-3 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m49sec

checking: EF [IS-FIREABLE [k52]]
normalized: E [true U IS-FIREABLE [k52]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-4 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m19sec

checking: EF [IS-FIREABLE [k27]]
normalized: E [true U IS-FIREABLE [k27]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-5 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m31sec

checking: EF [IS-FIREABLE [k45]]
normalized: E [true U IS-FIREABLE [k45]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-6 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m1sec

checking: EF [IS-FIREABLE [k51]]
normalized: E [true U IS-FIREABLE [k51]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-7 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m8sec

checking: EF [IS-FIREABLE [k27]]
normalized: E [true U IS-FIREABLE [k27]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-8 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m1sec

checking: EF [IS-FIREABLE [k49]]
normalized: E [true U IS-FIREABLE [k49]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-9 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 1m27sec

checking: EF [IS-FIREABLE [k47]]
normalized: E [true U IS-FIREABLE [k47]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-10 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 5m10sec

checking: EF [IS-FIREABLE [k46]]
normalized: E [true U IS-FIREABLE [k46]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-11 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 2m53sec

checking: EF [IS-FIREABLE [k50]]
normalized: E [true U IS-FIREABLE [k50]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-12 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 1m43sec

checking: AG [IS-FIREABLE [k31]]
normalized: ~ [E [true U ~ [IS-FIREABLE [k31]]]]

-> the formula is FALSE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-13 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m21sec

checking: EF [IS-FIREABLE [k47]]
normalized: E [true U IS-FIREABLE [k47]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-14 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 4m9sec

checking: EF [IS-FIREABLE [k12]]
normalized: E [true U IS-FIREABLE [k12]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-15-ReachabilityFireabilitySimple-15 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 1m56sec


Total processing time: 30m9sec


BK_STOP 1433157452057

--------------------
content from stderr:

check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m0sec

7655 40750 42462 42070 43302 42910 157720 319688 276519 278754 167340 209866 282798 260959 237117 210723 187144
iterations count:17483 (273), effective:1467 (22)

initing FirstDep: 0m0sec

373376
iterations count:1583 (24), effective:97 (1)
228717
iterations count:1070 (16), effective:60 (0)
394288
iterations count:1337 (20), effective:80 (1)
228717
iterations count:1085 (16), effective:61 (0)
228717
iterations count:1070 (16), effective:60 (0)
394288
iterations count:1337 (20), effective:80 (1)
228717
iterations count:1070 (16), effective:60 (0)
228717
iterations count:1071 (16), effective:60 (0)
394288
iterations count:1337 (20), effective:80 (1)
195677
iterations count:1073 (16), effective:58 (0)
259391
iterations count:1476 (23), effective:94 (1)
259391
iterations count:1477 (23), effective:94 (1)
195677
iterations count:1072 (16), effective:58 (0)

iterations count:74 (1), effective:3 (0)
259391
iterations count:1476 (23), effective:94 (1)
187992
iterations count:1052 (16), effective:56 (0)

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="S_Angiogenesis-PT-15"
export BK_EXAMINATION="ReachabilityFireabilitySimple"
export BK_TOOL="marcie"
export BK_RESULT_DIR="/users/gast00/fkordon/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/S_Angiogenesis-PT-15.tgz
mv S_Angiogenesis-PT-15 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2265"
echo " Executing tool marcie"
echo " Input is S_Angiogenesis-PT-15, examination is ReachabilityFireabilitySimple"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r120st-ebro-143297419400065"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireabilitySimple" = "ReachabilityComputeBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireabilitySimple" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireabilitySimple.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireabilitySimple.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireabilitySimple.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireabilitySimple.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;