Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
=====================================================================
Generated by BenchKit 2-2265
Executing tool marcie
Input is Angiogenesis-PT-05, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 1
Run identifier is r008kn-ebro-143214238800029
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-0
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-1
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-10
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-11
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-12
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-13
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-14
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-15
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-2
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-3
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-4
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-5
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-6
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-7
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-8
FORMULA_NAME Angiogenesis-PT-05-CTLFireability-9

=== Now, execution of the tool begins

BK_START 1432328113929

Model: Angiogenesis-PT-05
reachability algorithm:
Saturation-based algorithm
variable ordering algorithm:
Calculated like in [Noa99]
--memory=6 --suppress --rs-algorithm=3 --place-order=5

Marcie rev. 1429:1432M (built: crohr on 2014-10-22)
A model checker for Generalized Stochastic Petri nets

authors: Alex Tovchigrechko (IDD package and CTL model checking)

Martin Schwarick (Symbolic numerical analysis and CSL model checking)

Christian Rohr (Simulative and approximative numerical model checking)

marcie@informatik.tu-cottbus.de

called as: marcie --net-file=model.pnml --mcc-file=CTLFireability.xml --memory=6 --suppress --rs-algorithm=3 --place-order=5

parse successfull
net created successfully

(NrP: 39 NrTr: 64 NrArc: 185)

net check time: 0m0sec

parse formulas successfull
formulas created successfully
place and transition orderings generation:0m0sec

init dd package: 0m5sec


RS generation: 0m0sec


-> reachability set: #nodes 5306 (5.3e+03) #states 42,734,935 (7)



starting MCC model checker
--------------------------

checking: AG [[IS-FIREABLE [k19] | ~ [EG [IS-FIREABLE [k15]]]]]
normalized: ~ [E [true U ~ [[IS-FIREABLE [k19] | ~ [EG [IS-FIREABLE [k15]]]]]]]

..
EG iterations: 2
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-CTLFireability-0 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m1sec

checking: AF [~ [AG [~ [IS-FIREABLE [k45]]]]]
normalized: ~ [EG [~ [E [true U IS-FIREABLE [k45]]]]]

.
EG iterations: 1
-> the formula is TRUE

FORMULA Angiogenesis-PT-05-CTLFireability-1 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m0sec

checking: [IS-FIREABLE [k52] | [~ [IS-FIREABLE [k25]] & EF [IS-FIREABLE [k52]]]]
normalized: [IS-FIREABLE [k52] | [~ [IS-FIREABLE [k25]] & E [true U IS-FIREABLE [k52]]]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-05-CTLFireability-2 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m0sec

checking: EG [AG [EF [IS-FIREABLE [k35]]]]
normalized: EG [~ [E [true U ~ [E [true U IS-FIREABLE [k35]]]]]]

.
EG iterations: 1
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-CTLFireability-3 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m1sec

checking: AX [AG [[[IS-FIREABLE [k33] & IS-FIREABLE [k40]] | ~ [IS-FIREABLE [k45]]]]]
normalized: ~ [EX [E [true U ~ [[[IS-FIREABLE [k33] & IS-FIREABLE [k40]] | ~ [IS-FIREABLE [k45]]]]]]]

.-> the formula is FALSE

FORMULA Angiogenesis-PT-05-CTLFireability-4 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m0sec

checking: EX [AG [[~ [IS-FIREABLE [k63]] | [IS-FIREABLE [k56] | IS-FIREABLE [k43]]]]]
normalized: EX [~ [E [true U ~ [[~ [IS-FIREABLE [k63]] | [IS-FIREABLE [k56] | IS-FIREABLE [k43]]]]]]]

.-> the formula is FALSE

FORMULA Angiogenesis-PT-05-CTLFireability-5 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m0sec

checking: ~ [[E [~ [IS-FIREABLE [k16]] U [IS-FIREABLE [k43] & IS-FIREABLE [k5]]] | [~ [[~ [IS-FIREABLE [k33]] | ~ [IS-FIREABLE [t0]]]] & EF [[IS-FIREABLE [k5] & IS-FIREABLE [k9]]]]]]
normalized: ~ [[E [~ [IS-FIREABLE [k16]] U [IS-FIREABLE [k43] & IS-FIREABLE [k5]]] | [~ [[~ [IS-FIREABLE [k33]] | ~ [IS-FIREABLE [t0]]]] & E [true U [IS-FIREABLE [k5] & IS-FIREABLE [k9]]]]]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-05-CTLFireability-6 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m2sec

checking: ~ [[[EF [IS-FIREABLE [k57]] & [~ [IS-FIREABLE [k56]] & [[IS-FIREABLE [k2] | IS-FIREABLE [k51]] | [IS-FIREABLE [k29] | IS-FIREABLE [k20]]]]] | EF [AF [IS-FIREABLE [k44]]]]]
normalized: ~ [[[E [true U IS-FIREABLE [k57]] & [~ [IS-FIREABLE [k56]] & [[IS-FIREABLE [k2] | IS-FIREABLE [k51]] | [IS-FIREABLE [k29] | IS-FIREABLE [k20]]]]] | E [true U ~ [EG [~ [IS-FIREABLE [k44]]]]]]]

.
EG iterations: 1
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-CTLFireability-7 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m0sec

checking: ~ [[[EX [[IS-FIREABLE [k49] & IS-FIREABLE [k29]]] & IS-FIREABLE [k28]] | ~ [[~ [~ [IS-FIREABLE [k6]]] | EF [IS-FIREABLE [k9]]]]]]
normalized: ~ [[~ [[IS-FIREABLE [k6] | E [true U IS-FIREABLE [k9]]]] | [IS-FIREABLE [k28] & EX [[IS-FIREABLE [k49] & IS-FIREABLE [k29]]]]]]

.-> the formula is TRUE

FORMULA Angiogenesis-PT-05-CTLFireability-8 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m0sec

checking: E [AG [~ [IS-FIREABLE [k48]]] U AG [[IS-FIREABLE [k40] & IS-FIREABLE [k50]]]]
normalized: E [~ [E [true U IS-FIREABLE [k48]]] U ~ [E [true U ~ [[IS-FIREABLE [k40] & IS-FIREABLE [k50]]]]]]

-> the formula is FALSE

FORMULA Angiogenesis-PT-05-CTLFireability-9 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m0sec

checking: EG [[EF [[IS-FIREABLE [k17] & IS-FIREABLE [k46]]] | IS-FIREABLE [k25]]]
normalized: EG [[IS-FIREABLE [k25] | E [true U [IS-FIREABLE [k17] & IS-FIREABLE [k46]]]]]

.
EG iterations: 1
-> the formula is TRUE

FORMULA Angiogenesis-PT-05-CTLFireability-10 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m1sec

checking: [[[A [IS-FIREABLE [k2] U IS-FIREABLE [k32]] | AF [IS-FIREABLE [k51]]] | [EF [[IS-FIREABLE [k26] | IS-FIREABLE [k25]]] & [~ [[IS-FIREABLE [k10] | IS-FIREABLE [k46]]] | [[IS-FIREABLE [k61] & IS-FIREABLE [k27]] | [IS-FIREABLE [k50] | IS-FIREABLE [k47]]]]]] & AX [EF [[IS-FIREABLE [k31] & IS-FIREABLE [t0]]]]]
normalized: [~ [EX [~ [E [true U [IS-FIREABLE [k31] & IS-FIREABLE [t0]]]]]] & [[[[[IS-FIREABLE [k50] | IS-FIREABLE [k47]] | [IS-FIREABLE [k61] & IS-FIREABLE [k27]]] | ~ [[IS-FIREABLE [k10] | IS-FIREABLE [k46]]]] & E [true U [IS-FIREABLE [k26] | IS-FIREABLE [k25]]]] | [~ [EG [~ [IS-FIREABLE [k51]]]] | [~ [EG [~ [IS-FIREABLE [k32]]]] & ~ [E [~ [IS-FIREABLE [k2]] U [~ [IS-FIREABLE [k2]] & ~ [IS-FIREABLE [k32]]]]]]]]]

.
EG iterations: 1
.
EG iterations: 1
.-> the formula is TRUE

FORMULA Angiogenesis-PT-05-CTLFireability-11 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m1sec

checking: EF [~ [[[[IS-FIREABLE [k31] | IS-FIREABLE [k12]] | ~ [IS-FIREABLE [k50]]] | [[IS-FIREABLE [k8] & IS-FIREABLE [k34]] | [IS-FIREABLE [k42] & IS-FIREABLE [k49]]]]]]
normalized: E [true U ~ [[[[IS-FIREABLE [k42] & IS-FIREABLE [k49]] | [IS-FIREABLE [k8] & IS-FIREABLE [k34]]] | [~ [IS-FIREABLE [k50]] | [IS-FIREABLE [k31] | IS-FIREABLE [k12]]]]]]

-> the formula is TRUE

FORMULA Angiogenesis-PT-05-CTLFireability-12 TRUE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m0sec

checking: AG [EF [IS-FIREABLE [k40]]]
normalized: ~ [E [true U ~ [E [true U IS-FIREABLE [k40]]]]]

-> the formula is FALSE

FORMULA Angiogenesis-PT-05-CTLFireability-13 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m0sec

checking: [EG [~ [[IS-FIREABLE [k47] & [IS-FIREABLE [k4] & IS-FIREABLE [k10]]]]] & [EG [EX [IS-FIREABLE [k43]]] | AG [[~ [IS-FIREABLE [k15]] | IS-FIREABLE [k40]]]]]
normalized: [[~ [E [true U ~ [[IS-FIREABLE [k40] | ~ [IS-FIREABLE [k15]]]]]] | EG [EX [IS-FIREABLE [k43]]]] & EG [~ [[IS-FIREABLE [k47] & [IS-FIREABLE [k4] & IS-FIREABLE [k10]]]]]]

.
EG iterations: 1
...
EG iterations: 2
-> the formula is FALSE

FORMULA Angiogenesis-PT-05-CTLFireability-14 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m0sec

checking: AG [[~ [EX [IS-FIREABLE [k12]]] | [EF [IS-FIREABLE [k58]] & ~ [~ [IS-FIREABLE [t1]]]]]]
normalized: ~ [E [true U ~ [[[IS-FIREABLE [t1] & E [true U IS-FIREABLE [k58]]] | ~ [EX [IS-FIREABLE [k12]]]]]]]

.-> the formula is FALSE

FORMULA Angiogenesis-PT-05-CTLFireability-15 FALSE TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT

MC time: 0m0sec


Total processing time: 0m19sec


BK_STOP 1432328133800

--------------------
content from stderr:

check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok


initing FirstDep: 0m0sec

2693 3141 4748 5865 5965
iterations count:5828 (91), effective:482 (7)

initing FirstDep: 0m0sec

8067
iterations count:1413 (22), effective:89 (1)
6607
iterations count:1070 (16), effective:60 (0)
6607
iterations count:1070 (16), effective:60 (0)
7327
iterations count:1117 (17), effective:76 (1)
6069 7092
iterations count:2209 (34), effective:159 (2)
6607
iterations count:1071 (16), effective:61 (0)
8147
iterations count:1725 (26), effective:133 (2)
7780
iterations count:1710 (26), effective:108 (1)
11967
iterations count:1451 (22), effective:95 (1)
6607
iterations count:1070 (16), effective:60 (0)

iterations count:408 (6), effective:23 (0)
6607
iterations count:1074 (16), effective:60 (0)

iterations count:91 (1), effective:5 (0)
7131
iterations count:1476 (23), effective:94 (1)
11389 6928
iterations count:2271 (35), effective:147 (2)

iterations count:65 (1), effective:1 (0)
9521
iterations count:1330 (20), effective:79 (1)

iterations count:717 (11), effective:39 (0)
7011
iterations count:1135 (17), effective:68 (1)
6684
iterations count:1201 (18), effective:73 (1)
6069 7092
iterations count:2209 (34), effective:159 (2)
8954 7940
iterations count:2325 (36), effective:166 (2)
7973
iterations count:1758 (27), effective:103 (1)
5367
iterations count:1039 (16), effective:56 (0)

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-05"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="marcie"
export BK_RESULT_DIR="/users/gast00/fkordon/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-05.tgz
mv Angiogenesis-PT-05 execution

# this is for BenchKit: explicit launching of the test

cd execution
echo "====================================================================="
echo " Generated by BenchKit 2-2265"
echo " Executing tool marcie"
echo " Input is Angiogenesis-PT-05, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 1"
echo " Run identifier is r008kn-ebro-143214238800029"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "ReachabilityComputeBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;