Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/mnt/tpsp/fkordon/mcc2022-input.r013-tajo-165245733900224.qcow2', fmt=qcow2 size=4294967296 backing_file='/mnt/tpsp/fkordon/mcc2022-input.qcow2' encryption=off cluster_size=65536 lazy_refcounts=off
Waiting for the VM to be ready (probing ssh)
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=====================================================================
Generated by BenchKit 2-4028
Executing tool tapaal
Input is Angiogenesis-PT-25, examination is Liveness
Time confinement is 1800 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r013-tajo-165245733900224
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 260K
-rw-r--r-- 1 mcc users 7.2K Apr 29 19:35 CTLCardinality.txt
-rw-r--r-- 1 mcc users 70K Apr 29 19:35 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.6K Apr 29 19:35 CTLFireability.txt
-rw-r--r-- 1 mcc users 54K Apr 29 19:35 CTLFireability.xml
-rw-r--r-- 1 mcc users 6 May 10 09:33 equiv_col
-rw-r--r-- 1 mcc users 4.2K May 10 09:33 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 3 May 10 09:33 instance
-rw-r--r-- 1 mcc users 6 May 10 09:33 iscolored
-rw-r--r-- 1 mcc users 3.7K May 9 07:03 LTLCardinality.txt
-rw-r--r-- 1 mcc users 24K May 9 07:03 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K May 9 07:03 LTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 9 07:03 LTLFireability.xml
-rw-r--r-- 1 mcc users 33K May 10 09:33 model.pnml
-rw-r--r-- 1 mcc users 1.8K May 9 07:03 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 9 07:03 UpperBounds.xml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

FORMULA_NAME Liveness

=== Now, execution of the tool begins

BK_START 1652784746474

tapaal
Got BK_BIN_PATH=/home/mcc/BenchKit/bin/
---> tapaal --- TAPAAL v5
Setting MODEL_PATH=.
Setting VERIFYPN=/home/mcc/BenchKit/bin/verifypn
Got BK_TIME_CONFINEMENT=1800
Setting TEMPDIR=/home/mcc/BenchKit/bin/tmp
Got BK_MEMORY_CONFINEMENT=16384
Limiting to 16265216 kB
Total timeout: 1790
Time left: 1790

**********************************************
* TAPAAL checking for Liveness *
**********************************************
TEMPDIR=/home/mcc/BenchKit/bin/tmp
QF=/home/mcc/BenchKit/bin/tmp/tmp.uua6qrkEox
MF=/home/mcc/BenchKit/bin/tmp/tmp.dDA4H2WfFp
Time left: 1790
---------------------------------------------------
Step -1: Stripping Colors
---------------------------------------------------
Verifying stripped models (1 in total)
/home/mcc/BenchKit/bin/verifypn -n -c -q 358 -l 14 -d 149 -z 4 -x 1 ./model.pnml /home/mcc/BenchKit/bin/Liveness.xml
CPN OverApproximation is only usable on colored models
Time left: 1790
---------------------------------------------------
Step 0: Parallel Simplification
---------------------------------------------------
Doing parallel simplification (1 in total)
Total simplification timout is 358 -- reduction timeout is 149
timeout 1790 /home/mcc/BenchKit/bin/verifypn -n -q 358 -l 14 -d 149 -z 4 -s OverApprox --binary-query-io 2 --write-simplified /home/mcc/BenchKit/bin/tmp/tmp.uua6qrkEox --write-reduced /home/mcc/BenchKit/bin/tmp/tmp.dDA4H2WfFp -x 1 ./model.pnml /home/mcc/BenchKit/bin/Liveness.xml

Time left: 1790

---------------------------------------------------
Step 1: Parallel processing
---------------------------------------------------
Doing parallel verification of individual queries (1 in total)
Each query is verified by 4 parallel strategies for 298 seconds
------------------- QUERY 1 ----------------------
No solution found
Command terminated by signal 9
@@@154.36,7814560@@@


Time left: 1488
---------------------------------------------------
Step 2: Sequential processing
---------------------------------------------------
Remaining 1 queries are verified sequentially.
Each query is verified for a dynamic timeout (at least 0 seconds)
Time left: 1488
Time left: 1488
---------------------------------------------------
Step 4: Random Parallel processing
---------------------------------------------------
Doing random parallel verification of individual queries (1 in total)
Each query is verified by 4 parallel strategies for 1488 seconds
------------------- QUERY 1 ----------------------
No solution found
Command terminated by signal 9
@@@86.91,5427900@@@
Command terminated by signal 9
@@@122.48,6973928@@@
Command terminated by signal 9
@@@196.69,8130540@@@
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
Command terminated by signal 6
@@@371.63,15835288@@@


Time left: 1116
Time left: 1116
---------------------------------------------------
Step 4: Random Parallel processing
---------------------------------------------------
Doing random parallel verification of individual queries (1 in total)
Each query is verified by 4 parallel strategies for 1116 seconds
------------------- QUERY 1 ----------------------
No solution found
Command terminated by signal 9
@@@100.15,4193916@@@
Command terminated by signal 9
@@@129.33,5581604@@@
Command terminated by signal 9
@@@184.74,8212800@@@
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
Command terminated by signal 6
@@@343.41,15835432@@@


Time left: 772
Time left: 772
---------------------------------------------------
Step 4: Random Parallel processing
---------------------------------------------------
Doing random parallel verification of individual queries (1 in total)
Each query is verified by 4 parallel strategies for 772 seconds
------------------- QUERY 1 ----------------------
No solution found
Command terminated by signal 9
@@@81.68,5664892@@@
Command terminated by signal 9
@@@118.85,7748096@@@
Command terminated by signal 9
@@@191.58,8419740@@@
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
Command terminated by signal 6
@@@347.68,15835352@@@


Time left: 424
Time left: 424
---------------------------------------------------
Step 4: Random Parallel processing
---------------------------------------------------
Doing random parallel verification of individual queries (1 in total)
Each query is verified by 4 parallel strategies for 424 seconds
------------------- QUERY 1 ----------------------
No solution found
Command terminated by signal 9
@@@76.31,4364784@@@
Command terminated by signal 9
@@@104.80,5889340@@@
Command terminated by signal 9
@@@159.18,8113792@@@
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
Command terminated by signal 6
@@@307.57,15835424@@@


Time left: 116
Time left: 116
---------------------------------------------------
Step 4: Random Parallel processing
---------------------------------------------------
Doing random parallel verification of individual queries (1 in total)
Each query is verified by 4 parallel strategies for 116 seconds
------------------- QUERY 1 ----------------------
No solution found
Command terminated by signal 9
@@@109.83,4153300@@@


Time left: -2
Out of time, terminating!
terminated-with-cleanup

BK_STOP 1652786539014

--------------------
content from stderr:

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-25"
export BK_EXAMINATION="Liveness"
export BK_TOOL="tapaal"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="1800"
export BK_MEMORY_CONFINEMENT="16384"
export BK_BIN_PATH="/home/mcc/BenchKit/bin/"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-4028"
echo " Executing tool tapaal"
echo " Input is Angiogenesis-PT-25, examination is Liveness"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r013-tajo-165245733900224"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-25.tgz
mv Angiogenesis-PT-25 execution
cd execution
if [ "Liveness" = "ReachabilityDeadlock" ] || [ "Liveness" = "UpperBounds" ] || [ "Liveness" = "QuasiLiveness" ] || [ "Liveness" = "StableMarking" ] || [ "Liveness" = "Liveness" ] || [ "Liveness" = "OneSafe" ] || [ "Liveness" = "StateSpace" ]; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "Liveness" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "Liveness" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "Liveness.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property Liveness.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "Liveness.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' Liveness.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ "Liveness" = "ReachabilityDeadlock" ] || [ "Liveness" = "QuasiLiveness" ] || [ "Liveness" = "StableMarking" ] || [ "Liveness" = "Liveness" ] || [ "Liveness" = "OneSafe" ] ; then
echo "FORMULA_NAME Liveness"
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;